Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is paaE [C]
Identifier: 51893893
GI number: 51893893
Start: 2974525
End: 2975226
Strand: Reverse
Name: paaE [C]
Synonym: STH2755
Alternate gene names: 51893893
Gene position: 2975226-2974525 (Counterclockwise)
Preceding gene: 51893894
Following gene: 51893892
Centisome position: 83.43
GC content: 69.23
Gene sequence:
>702_bases GTGCCTGAGACCAAGTATGGATCGCGGATCTACCTGGGCGTGCTCGCCGAGGCCGATGCCGCCGGCCCGACGGCCGTCCG GGTTTACCAGGACTTCCTCGGCCGCCTGCGCCGGGCTGCCCCGGGCGTGAAGGAGCTGCGGCTGGAACTGGAGGAGCCGG CGCCGCGCAAGGAGACCCCAGGGGTGTACGAGTGCTGGGCGACGCTGAAGGCCGTCGTGCCCCACGACCTGACCCGCGAC GGCGCCGGCAACCACCGGGACGCCTGGCGGGCGATCCTGCGCGACACGTTCCAGGCCACCTGCCAGCTGAACCACGAGCT GGTCCACCACACGTCCAGCCGGGTGGAGATCACCCGGGAGGTCTTCCCCTTCGAGGAGGAGGCCCGGGCGGAAGCGGCGC CGGTGGAGGAGACGCCCAAGGAGATGATCCGGGTCAAGGTGCTGCTGGGGGGGCAGGTCTACGACGTCGAGATCCCCAAG GACGAGAACCTGCTGGACGGCGTCAACGCCAAGGGCGTGGACGTCAAGTGGGACTGCAAGAGCGGCGTCTGCGACACCTG CCAGATCCGGGTCCTGAAGGGCATGGAGAACCTGAGCCCGGTGAACGACCGGGAGCGGGAGATGCTGGGGGACAAGATCA ACCAGGGCTACCGGCTCTGCTGCCAGGTGACCGCCCACGGGCCCTGCGAGTTCGAGCACTAA
Upstream 100 bases:
>100_bases AGCCGCCACCTTTTTTTGATTGAGCCATCACCGAAACTTCCGTATAATTATAGGCATGCTGATTCAGTTAGAGCTTCCGT GGGAGGAGGAGGGTCCGGCA
Downstream 100 bases:
>100_bases CCTGCGCAAGAGCGCCGATCCTGCCCGCCGCAGGGTCGGCGCCTCGCGTTTGGTGTGCTACAATCAGCAGTGCGGCAGAC CGAGCATGGGAAGGGGGAAA
Product: ferredoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPETKYGSRIYLGVLAEADAAGPTAVRVYQDFLGRLRRAAPGVKELRLELEEPAPRKETPGVYECWATLKAVVPHDLTRD GAGNHRDAWRAILRDTFQATCQLNHELVHHTSSRVEITREVFPFEEEARAEAAPVEETPKEMIRVKVLLGGQVYDVEIPK DENLLDGVNAKGVDVKWDCKSGVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGPCEFEH
Sequences:
>Translated_233_residues MPETKYGSRIYLGVLAEADAAGPTAVRVYQDFLGRLRRAAPGVKELRLELEEPAPRKETPGVYECWATLKAVVPHDLTRD GAGNHRDAWRAILRDTFQATCQLNHELVHHTSSRVEITREVFPFEEEARAEAAPVEETPKEMIRVKVLLGGQVYDVEIPK DENLLDGVNAKGVDVKWDCKSGVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGPCEFEH >Mature_232_residues PETKYGSRIYLGVLAEADAAGPTAVRVYQDFLGRLRRAAPGVKELRLELEEPAPRKETPGVYECWATLKAVVPHDLTRDG AGNHRDAWRAILRDTFQATCQLNHELVHHTSSRVEITREVFPFEEEARAEAAPVEETPKEMIRVKVLLGGQVYDVEIPKD ENLLDGVNAKGVDVKWDCKSGVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGPCEFEH
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26181; Mature: 26050
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETKYGSRIYLGVLAEADAAGPTAVRVYQDFLGRLRRAAPGVKELRLELEEPAPRKETP CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC GVYECWATLKAVVPHDLTRDGAGNHRDAWRAILRDTFQATCQLNHELVHHTSSRVEITRE CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH VFPFEEEARAEAAPVEETPKEMIRVKVLLGGQVYDVEIPKDENLLDGVNAKGVDVKWDCK HCCCCHHHHCCCCCCCCCHHHHHEEEEEECCEEEEEECCCCCCHHCCCCCCCCEEEECCC SGVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGPCEFEH CCCCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure PETKYGSRIYLGVLAEADAAGPTAVRVYQDFLGRLRRAAPGVKELRLELEEPAPRKETP CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC GVYECWATLKAVVPHDLTRDGAGNHRDAWRAILRDTFQATCQLNHELVHHTSSRVEITRE CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH VFPFEEEARAEAAPVEETPKEMIRVKVLLGGQVYDVEIPKDENLLDGVNAKGVDVKWDCK HCCCCHHHHCCCCCCCCCHHHHHEEEEEECCEEEEEECCCCCCHHCCCCCCCCEEEECCC SGVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGPCEFEH CCCCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA