Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is 51893894
Identifier: 51893894
GI number: 51893894
Start: 2975459
End: 2976226
Strand: Reverse
Name: 51893894
Synonym: STH2756
Alternate gene names: NA
Gene position: 2976226-2975459 (Counterclockwise)
Preceding gene: 51893895
Following gene: 51893893
Centisome position: 83.46
GC content: 68.23
Gene sequence:
>768_bases ATGATCCGCGACCTCCTGCTGCGCATCGGTGACGGCGTCGTGGACTACCACCTGCTGCTGGACGAGCAGGAGATCGCGCT GAACCCGCTCCTCGGCGGGCGGGTGGCCATCCGGTTCACCGGCGAGCGACGCTGCGTCTACTGCGGCCGCAGAGCGAGCA AGCTGTTCAACAACGGGTCGTGCTGGCCGTGCTTCCGGCGGCTGGCCATCAACGATCTCTGCCAGGTGAAGCCCACGCTC TGCCACTACGAGACCTGCCGGGAGCCCGAGTGGGGCGACGCCCATTGTATGATCCCGACCTACGTCTACCTGGCCAGGTC CAGTGACGTGAAGGTGGGCATCACCCGCAGCCTGCCCGGCCGCTGGCTGGACCAGGGGGCGGTGGAGGCGGTGCCCATCG CCCGGGTGCCCAACCGCAAGATGGCGGGTGAGCTGGAGGCGTTCCTGACGCAGTACGTGGCGGACAAGACCAACTGGCGG CGCATGCTGAAGGGGGAGGTGGCGGACGCCGATCTCCTGGCGGAGCGCAGCCGGCTGCTGGAGCTGATCCCCGCCGAGTT CCGGCCCTACGTCCTCCCGGACGAGGAGGTGCGCAGCTTCACCTACCCGCTGAAGGCGCCGCCCCCCAAGCTGGCGTCGT GCGACCTGGAGAAGGGTGACGTGGAAGGGACGCTGCTCGGCATGAAGGGCAGCTACCTGGTGCTCGACACAGGCGTGCTC AACGTGCCCAAGTTCGCCGGCTACGTCGTCACCTTCGAGGCCGGATAG
Upstream 100 bases:
>100_bases CGGGGCAGCGGCGCGGGGAGGAGAACGGCCGGCGAATCCCGAACCGAGGGGGAAGAAGCCTCAACCCTCACAGAATCGGG GTGAAACCGTGTATACCGGC
Downstream 100 bases:
>100_bases GCAGCCCGGCCGGGCTGCCAACCTGTGGTCAAATCGTTACATCCGTGTCACTGATTTGTAACCGACGTGGGGTAACATAC GAAGTGTGTTGACCCCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIRDLLLRIGDGVVDYHLLLDEQEIALNPLLGGRVAIRFTGERRCVYCGRRASKLFNNGSCWPCFRRLAINDLCQVKPTL CHYETCREPEWGDAHCMIPTYVYLARSSDVKVGITRSLPGRWLDQGAVEAVPIARVPNRKMAGELEAFLTQYVADKTNWR RMLKGEVADADLLAERSRLLELIPAEFRPYVLPDEEVRSFTYPLKAPPPKLASCDLEKGDVEGTLLGMKGSYLVLDTGVL NVPKFAGYVVTFEAG
Sequences:
>Translated_255_residues MIRDLLLRIGDGVVDYHLLLDEQEIALNPLLGGRVAIRFTGERRCVYCGRRASKLFNNGSCWPCFRRLAINDLCQVKPTL CHYETCREPEWGDAHCMIPTYVYLARSSDVKVGITRSLPGRWLDQGAVEAVPIARVPNRKMAGELEAFLTQYVADKTNWR RMLKGEVADADLLAERSRLLELIPAEFRPYVLPDEEVRSFTYPLKAPPPKLASCDLEKGDVEGTLLGMKGSYLVLDTGVL NVPKFAGYVVTFEAG >Mature_255_residues MIRDLLLRIGDGVVDYHLLLDEQEIALNPLLGGRVAIRFTGERRCVYCGRRASKLFNNGSCWPCFRRLAINDLCQVKPTL CHYETCREPEWGDAHCMIPTYVYLARSSDVKVGITRSLPGRWLDQGAVEAVPIARVPNRKMAGELEAFLTQYVADKTNWR RMLKGEVADADLLAERSRLLELIPAEFRPYVLPDEEVRSFTYPLKAPPPKLASCDLEKGDVEGTLLGMKGSYLVLDTGVL NVPKFAGYVVTFEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28623; Mature: 28623
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDLLLRIGDGVVDYHLLLDEQEIALNPLLGGRVAIRFTGERRCVYCGRRASKLFNNGS CHHHHHHHHCCCEEEEEEEECCCHHEECCCCCCEEEEEEECCCEEEEECCHHHHHHCCCC CWPCFRRLAINDLCQVKPTLCHYETCREPEWGDAHCMIPTYVYLARSSDVKVGITRSLPG HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEECCEEEEEEECCCEEEEEECCCCC RWLDQGAVEAVPIARVPNRKMAGELEAFLTQYVADKTNWRRMLKGEVADADLLAERSRLL CHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH ELIPAEFRPYVLPDEEVRSFTYPLKAPPPKLASCDLEKGDVEGTLLGMKGSYLVLDTGVL HHCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCC NVPKFAGYVVTFEAG CCCCCCCEEEEEECC >Mature Secondary Structure MIRDLLLRIGDGVVDYHLLLDEQEIALNPLLGGRVAIRFTGERRCVYCGRRASKLFNNGS CHHHHHHHHCCCEEEEEEEECCCHHEECCCCCCEEEEEEECCCEEEEECCHHHHHHCCCC CWPCFRRLAINDLCQVKPTLCHYETCREPEWGDAHCMIPTYVYLARSSDVKVGITRSLPG HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEECCEEEEEEECCCEEEEEECCCCC RWLDQGAVEAVPIARVPNRKMAGELEAFLTQYVADKTNWRRMLKGEVADADLLAERSRLL CHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH ELIPAEFRPYVLPDEEVRSFTYPLKAPPPKLASCDLEKGDVEGTLLGMKGSYLVLDTGVL HHCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCC NVPKFAGYVVTFEAG CCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA