Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598877
Identifier: 51598877
GI number: 51598877
Start: 655818
End: 656780
Strand: Direct
Name: 51598877
Synonym: BG0643
Alternate gene names: NA
Gene position: 655818-656780 (Clockwise)
Preceding gene: 51598874
Following gene: 51598878
Centisome position: 72.53
GC content: 25.96
Gene sequence:
>963_bases ATGAAAATTAGAAAATTACTTTTTTGTGTCTTTTTTACGAATATTTCTTTTGTTTTGTTTGCGGAGGATTACAAGGACCT TGATTTTAAAATCAAGTTTTTCAATCAATCTATTTATCGTATCAATAGTAATGTTTTTATTGAAGTTTCTCTTAGCAATA CATCTGACAGTGTTTTAACTTTAGAAATAGGCGATATTAATTCTTTTGGCTTTGATTTTGATGTTACTGATACCACCAAT ATTAAAGTTAAAAGACCTATTGAATATGTTGAAATGAGATCTAAAAATGTTGCTATTCCTGTTAGAAATATGAGTTTAAG ACCTAATGAAAAGTTTTCTGCAGTTATTAATTTAAATCAATTTGTTAAGTTTAGTAAAGATGGAGTTTATTTTGTTAAGG GTGTTTTTTTCCCAGACATTTCAGATCCATCTAAGAAAAAAGAATCCAATATTATTACGCTTTTTTTAAATGATAGTTTT GATGAAAATCCAGGCAGTATAGATCTTGTTAATTTATCTGAAAATAAGGATATTCAAGATATCCTGAAAAAGAAAAAACT ATCTCCTGATGAAATTGTTAAATATTTATTAAAGGCATTGCAGCTTGGAAAAAAAGAAAAATTCTTTTTATATCTTGATA TTGAAGGTTTATTATTAAACGATAAAGGCAAAGCATACCTTTATAAACAAAAGTTATCATCTGCTCCTAATCAAAATGTA CTTGAAGAGTATAAGGAATATTTATGGAATTCTAATAATTCAGATATTTCAAAAGCACCAAATGAATTTTCTATTATTGA GACAACTTATTCTGATACTGCGGGCAAAGTCATTGCTGATTTATATTTTGACGATGGGCATTTTTATATTTCCAAAAGAT ATACTTTTTTCTTCAAAAAATATGATTATTATTGGATAATTTATGACTACATTGTTCAAAATACTGGTATTAAGGAAAAG TAA
Upstream 100 bases:
>100_bases TCATTTTTTACCTTTTTGTTTAATTTATTTAGTATAATAATATACTATAGGTATTATTACTTTCTTTATATATAATGTGG TTAGGTTTTGAGGGGAGCTT
Downstream 100 bases:
>100_bases AACTCTTGGTGTTTTACAAATTATAGGACTTATTATTTTATTTTATTTTTCAATAATAAGTCCTACTAATCTTAATGCTG ATTTTGAGTATAAGGTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKIRKLLFCVFFTNISFVLFAEDYKDLDFKIKFFNQSIYRINSNVFIEVSLSNTSDSVLTLEIGDINSFGFDFDVTDTTN IKVKRPIEYVEMRSKNVAIPVRNMSLRPNEKFSAVINLNQFVKFSKDGVYFVKGVFFPDISDPSKKKESNIITLFLNDSF DENPGSIDLVNLSENKDIQDILKKKKLSPDEIVKYLLKALQLGKKEKFFLYLDIEGLLLNDKGKAYLYKQKLSSAPNQNV LEEYKEYLWNSNNSDISKAPNEFSIIETTYSDTAGKVIADLYFDDGHFYISKRYTFFFKKYDYYWIIYDYIVQNTGIKEK
Sequences:
>Translated_320_residues MKIRKLLFCVFFTNISFVLFAEDYKDLDFKIKFFNQSIYRINSNVFIEVSLSNTSDSVLTLEIGDINSFGFDFDVTDTTN IKVKRPIEYVEMRSKNVAIPVRNMSLRPNEKFSAVINLNQFVKFSKDGVYFVKGVFFPDISDPSKKKESNIITLFLNDSF DENPGSIDLVNLSENKDIQDILKKKKLSPDEIVKYLLKALQLGKKEKFFLYLDIEGLLLNDKGKAYLYKQKLSSAPNQNV LEEYKEYLWNSNNSDISKAPNEFSIIETTYSDTAGKVIADLYFDDGHFYISKRYTFFFKKYDYYWIIYDYIVQNTGIKEK >Mature_320_residues MKIRKLLFCVFFTNISFVLFAEDYKDLDFKIKFFNQSIYRINSNVFIEVSLSNTSDSVLTLEIGDINSFGFDFDVTDTTN IKVKRPIEYVEMRSKNVAIPVRNMSLRPNEKFSAVINLNQFVKFSKDGVYFVKGVFFPDISDPSKKKESNIITLFLNDSF DENPGSIDLVNLSENKDIQDILKKKKLSPDEIVKYLLKALQLGKKEKFFLYLDIEGLLLNDKGKAYLYKQKLSSAPNQNV LEEYKEYLWNSNNSDISKAPNEFSIIETTYSDTAGKVIADLYFDDGHFYISKRYTFFFKKYDYYWIIYDYIVQNTGIKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37399; Mature: 37399
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRKLLFCVFFTNISFVLFAEDYKDLDFKIKFFNQSIYRINSNVFIEVSLSNTSDSVLT CCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCCEEE LEIGDINSFGFDFDVTDTTNIKVKRPIEYVEMRSKNVAIPVRNMSLRPNEKFSAVINLNQ EEECCCCCCCCEEECCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEHHH FVKFSKDGVYFVKGVFFPDISDPSKKKESNIITLFLNDSFDENPGSIDLVNLSENKDIQD HEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHH ILKKKKLSPDEIVKYLLKALQLGKKEKFFLYLDIEGLLLNDKGKAYLYKQKLSSAPNQNV HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHCCCCCHHH LEEYKEYLWNSNNSDISKAPNEFSIIETTYSDTAGKVIADLYFDDGHFYISKRYTFFFKK HHHHHHHHCCCCCCCHHCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEEEE YDYYWIIYDYIVQNTGIKEK CCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MKIRKLLFCVFFTNISFVLFAEDYKDLDFKIKFFNQSIYRINSNVFIEVSLSNTSDSVLT CCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEECCEEEEECCCEEEEEEECCCCCCEEE LEIGDINSFGFDFDVTDTTNIKVKRPIEYVEMRSKNVAIPVRNMSLRPNEKFSAVINLNQ EEECCCCCCCCEEECCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEHHH FVKFSKDGVYFVKGVFFPDISDPSKKKESNIITLFLNDSFDENPGSIDLVNLSENKDIQD HEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHH ILKKKKLSPDEIVKYLLKALQLGKKEKFFLYLDIEGLLLNDKGKAYLYKQKLSSAPNQNV HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHCCCCCHHH LEEYKEYLWNSNNSDISKAPNEFSIIETTYSDTAGKVIADLYFDDGHFYISKRYTFFFKK HHHHHHHHCCCCCCCHHCCCCCEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEEEE YDYYWIIYDYIVQNTGIKEK CCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA