Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is mltD [C]
Identifier: 51598878
GI number: 51598878
Start: 656749
End: 658836
Strand: Direct
Name: mltD [C]
Synonym: BG0644
Alternate gene names: 51598878
Gene position: 656749-658836 (Clockwise)
Preceding gene: 51598877
Following gene: 51598882
Centisome position: 72.63
GC content: 28.83
Gene sequence:
>2088_bases TTGTTCAAAATACTGGTATTAAGGAAAAGTAAAACTCTTGGTGTTTTACAAATTATAGGACTTATTATTTTATTTTATTT TTCAATAATAAGTCCTACTAATCTTAATGCTGATTTTGAGTATAAGGTTGTCAAAGGAGATACTCTTTTTTCAATTGCAA TTAAATATAAAGCTAAATTAAATGATCTTAAAAGGATTAATAAACTTAATGTTGACAATATTAGGGTGGGTCAAATATTA ATTATTCCAAGTGATTCTAATTTAGATCAGAACATTACTCATAAAGTCAATAATTCTTTTAATTCGTTAGAATCTGTTAA GAAAGGGGTAATTCTTTATACCACAAAAGAGAATGACACTGTTGAGAGCGTTTCAAAGCTTGTTGGAATAAGCCAAGAAG AGATAATAGCTTGGAATGATTTACGATCTAAAGACCTTAAAGTTGGAATGAAGCTTGTATTAACTGAGCCTGATTTTTTA AAGCCTTATGTAGTTAAAAAAGGCGATTCACTTTCAAAACTTGCTCAGGATTTTGATATTAGTTCTAAGGATATTTTAAA ATTTAATTTTCTTAATGATGATAAATTAAAGATTGGCCAACGTCTTTTTTTAAAGAAAGCGACCGAGAGTGTTAATTTTC ATTATGTTAAAAAAGGAGAAACTCTTGGTAGAATAGCTTATATCTATAGCCTTACTGCTAGGGATCTTGTAGCTCTTAAT GGCAATCGAGCTGTTAATCTTAAAGCAGGCTCATTGCTAAATGTTTTAAAGATTGTAAATAATGATTTAGAAAAGCCTTT TGAGAAAGATTTAAAAATTGAGGAAAAAACAGGTAATCAGTTTATCTATCATTCAGTTGCTGTGGGGGAAACTTTATATA GCATTGCTAGGCACTATGGTGTTTTAATTGAGGATCTTAAAAATTGGAATAATTTAAGTAGTAACAATATTATGCACGAT CAAAAATTGAAAATTTTTGATAAAAAACTTTTACTTGATTCTTCTATAATTAAATCTAAAAACGATTCAGATATTAAAAA CAAAGTTGATTCTAGCGCTAATTCTTCTAATAAAGTTCAAACAATAGTTAATTTTCCCTCAAGCAAAAACAAAAAGCTAA ATTTAAATACTTTTGGAACTACTGTCAATCAAGATCTTTTTGATATTAGTTCTTTGGTTATTTTAGACTCCAAAATACCA ATATTTGAAGTTGTTGGTGATTTCTATTATTGGTATAGACCTAAAAAGATAAGTCAGCCAAGTGAGTTTTATTCAGAAGA TTGGCATTCTCCTTTAAATTCTTATAAAAAGGCGACTCAACTTTTCAAAAGTTTTGAAAAGTTGGTAAATTCTAGGTTTA ATAAAGGATCAAGACTTAAAGATAAGTTAATAATTCTTGATCCCGGACACGGGGGCCTTGATCCTGGAGCTATTGTTAAA TCTAGAGATGGTCTTGGAAACGAAGTTTTTGTTGTTGAAGATGAATATGTTTATGATATTGCTTTAAGGCTTTATGTATA CCTTAAACAAGAAGGGGCCAATGTTGAGCTTACTATTTTAGCCCCCGATCATTTAATTAGGAATAGTGTTTTTGCTAACA ATACTTTTGTTAATGTTAAAAATGAGATTTACAATGATTATGACCTAAACAAAAATGATACTGTTGATTCCTGGATAAGC GGTACTCCATCGGGCCTTAAAAAAAGATTGGTCGTTGTTAAAAACATTGTTAGTAAATATAAAAATATTAAAGATAAGGA TATAGCCTTTTTTAGTTTACATGCAGATAATAGTGTTGGTGCGCCTAAGAGTATGGGGTTTTATTATCAAAAAGATGACG AAAAAAAATATGATATTCATTCAAAATCTGTAGCAGAAAAAATTACAGAAGGAATGAAAAGAAGTTTTTATATTAAGGGT CAAAATCTCCATGTTTTAAGAAATAATATAGTAATGACGAAGCTTTTAATAGAAGTAAGAAATTTAGCATTTCCAGAGGA AGCTTGGTCTATTAGGTCTTCTAAGCTTAGAGATCAAGATTCCAAAATTCTTGCTAATGGGATTTTAAAAATATTAGAAA ATAATTGA
Upstream 100 bases:
>100_bases ATTGCTGATTTATATTTTGACGATGGGCATTTTTATATTTCCAAAAGATATACTTTTTTCTTCAAAAAATATGATTATTA TTGGATAATTTATGACTACA
Downstream 100 bases:
>100_bases CAAAAATTTTTAAATTTAAGATAATATTCCTAGTGTTCAATTTCCCCTATAGCTCAGTGGTAGAGCGGGTGGCTGTTAAC CACTAGGTCGGAGGTTCAAG
Product: N-acetylmuramoyl-L-alanine amidase, putative
Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]
Alternate protein names: Beta-glycosidase; Peptidoglycan hydrolase [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MFKILVLRKSKTLGVLQIIGLIILFYFSIISPTNLNADFEYKVVKGDTLFSIAIKYKAKLNDLKRINKLNVDNIRVGQIL IIPSDSNLDQNITHKVNNSFNSLESVKKGVILYTTKENDTVESVSKLVGISQEEIIAWNDLRSKDLKVGMKLVLTEPDFL KPYVVKKGDSLSKLAQDFDISSKDILKFNFLNDDKLKIGQRLFLKKATESVNFHYVKKGETLGRIAYIYSLTARDLVALN GNRAVNLKAGSLLNVLKIVNNDLEKPFEKDLKIEEKTGNQFIYHSVAVGETLYSIARHYGVLIEDLKNWNNLSSNNIMHD QKLKIFDKKLLLDSSIIKSKNDSDIKNKVDSSANSSNKVQTIVNFPSSKNKKLNLNTFGTTVNQDLFDISSLVILDSKIP IFEVVGDFYYWYRPKKISQPSEFYSEDWHSPLNSYKKATQLFKSFEKLVNSRFNKGSRLKDKLIILDPGHGGLDPGAIVK SRDGLGNEVFVVEDEYVYDIALRLYVYLKQEGANVELTILAPDHLIRNSVFANNTFVNVKNEIYNDYDLNKNDTVDSWIS GTPSGLKKRLVVVKNIVSKYKNIKDKDIAFFSLHADNSVGAPKSMGFYYQKDDEKKYDIHSKSVAEKITEGMKRSFYIKG QNLHVLRNNIVMTKLLIEVRNLAFPEEAWSIRSSKLRDQDSKILANGILKILENN
Sequences:
>Translated_695_residues MFKILVLRKSKTLGVLQIIGLIILFYFSIISPTNLNADFEYKVVKGDTLFSIAIKYKAKLNDLKRINKLNVDNIRVGQIL IIPSDSNLDQNITHKVNNSFNSLESVKKGVILYTTKENDTVESVSKLVGISQEEIIAWNDLRSKDLKVGMKLVLTEPDFL KPYVVKKGDSLSKLAQDFDISSKDILKFNFLNDDKLKIGQRLFLKKATESVNFHYVKKGETLGRIAYIYSLTARDLVALN GNRAVNLKAGSLLNVLKIVNNDLEKPFEKDLKIEEKTGNQFIYHSVAVGETLYSIARHYGVLIEDLKNWNNLSSNNIMHD QKLKIFDKKLLLDSSIIKSKNDSDIKNKVDSSANSSNKVQTIVNFPSSKNKKLNLNTFGTTVNQDLFDISSLVILDSKIP IFEVVGDFYYWYRPKKISQPSEFYSEDWHSPLNSYKKATQLFKSFEKLVNSRFNKGSRLKDKLIILDPGHGGLDPGAIVK SRDGLGNEVFVVEDEYVYDIALRLYVYLKQEGANVELTILAPDHLIRNSVFANNTFVNVKNEIYNDYDLNKNDTVDSWIS GTPSGLKKRLVVVKNIVSKYKNIKDKDIAFFSLHADNSVGAPKSMGFYYQKDDEKKYDIHSKSVAEKITEGMKRSFYIKG QNLHVLRNNIVMTKLLIEVRNLAFPEEAWSIRSSKLRDQDSKILANGILKILENN >Mature_695_residues MFKILVLRKSKTLGVLQIIGLIILFYFSIISPTNLNADFEYKVVKGDTLFSIAIKYKAKLNDLKRINKLNVDNIRVGQIL IIPSDSNLDQNITHKVNNSFNSLESVKKGVILYTTKENDTVESVSKLVGISQEEIIAWNDLRSKDLKVGMKLVLTEPDFL KPYVVKKGDSLSKLAQDFDISSKDILKFNFLNDDKLKIGQRLFLKKATESVNFHYVKKGETLGRIAYIYSLTARDLVALN GNRAVNLKAGSLLNVLKIVNNDLEKPFEKDLKIEEKTGNQFIYHSVAVGETLYSIARHYGVLIEDLKNWNNLSSNNIMHD QKLKIFDKKLLLDSSIIKSKNDSDIKNKVDSSANSSNKVQTIVNFPSSKNKKLNLNTFGTTVNQDLFDISSLVILDSKIP IFEVVGDFYYWYRPKKISQPSEFYSEDWHSPLNSYKKATQLFKSFEKLVNSRFNKGSRLKDKLIILDPGHGGLDPGAIVK SRDGLGNEVFVVEDEYVYDIALRLYVYLKQEGANVELTILAPDHLIRNSVFANNTFVNVKNEIYNDYDLNKNDTVDSWIS GTPSGLKKRLVVVKNIVSKYKNIKDKDIAFFSLHADNSVGAPKSMGFYYQKDDEKKYDIHSKSVAEKITEGMKRSFYIKG QNLHVLRNNIVMTKLLIEVRNLAFPEEAWSIRSSKLRDQDSKILANGILKILENN
Specific function: Hydrolyzes the cell wall of E.faecalis and M.lysodeikticus. May play an important role in cell wall growth and cell separation [H]
COG id: COG0860
COG function: function code M; N-acetylmuramoyl-L-alanine amidase
Gene ontology:
Cell location: Secreted (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 6 LysM repeats [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013338 - InterPro: IPR002901 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF01832 Glucosaminidase; PF01476 LysM [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 79084; Mature: 79084
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKILVLRKSKTLGVLQIIGLIILFYFSIISPTNLNADFEYKVVKGDTLFSIAIKYKAKL CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEEHHHH NDLKRINKLNVDNIRVGQILIIPSDSNLDQNITHKVNNSFNSLESVKKGVILYTTKENDT HHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCEEEEEECCCCH VESVSKLVGISQEEIIAWNDLRSKDLKVGMKLVLTEPDFLKPYVVKKGDSLSKLAQDFDI HHHHHHHHCCCHHHEEEECCCCCCHHHCCEEEEEECCCCCCCEEEECCCHHHHHHHHCCC SSKDILKFNFLNDDKLKIGQRLFLKKATESVNFHYVKKGETLGRIAYIYSLTARDLVALN CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHEEEEEEEEHHHHEEEEC GNRAVNLKAGSLLNVLKIVNNDLEKPFEKDLKIEEKTGNQFIYHSVAVGETLYSIARHYG CCEEEEEECHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEEEEHHHHHHHHHHHHHHH VLIEDLKNWNNLSSNNIMHDQKLKIFDKKLLLDSSIIKSKNDSDIKNKVDSSANSSNKVQ HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE TIVNFPSSKNKKLNLNTFGTTVNQDLFDISSLVILDSKIPIFEVVGDFYYWYRPKKISQP EEEECCCCCCCEEEEEECCCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHEECCCCCCCC SEFYSEDWHSPLNSYKKATQLFKSFEKLVNSRFNKGSRLKDKLIILDPGHGGLDPGAIVK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEE SRDGLGNEVFVVEDEYVYDIALRLYVYLKQEGANVELTILAPDHLIRNSVFANNTFVNVK CCCCCCCEEEEEECCHHHHHHHHHEEEEEECCCCEEEEEECCHHHHHCCEECCCCEEEEH NEIYNDYDLNKNDTVDSWISGTPSGLKKRLVVVKNIVSKYKNIKDKDIAFFSLHADNSVG HHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC APKSMGFYYQKDDEKKYDIHSKSVAEKITEGMKRSFYIKGQNLHVLRNNIVMTKLLIEVR CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHH NLAFPEEAWSIRSSKLRDQDSKILANGILKILENN HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKILVLRKSKTLGVLQIIGLIILFYFSIISPTNLNADFEYKVVKGDTLFSIAIKYKAKL CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEEHHHH NDLKRINKLNVDNIRVGQILIIPSDSNLDQNITHKVNNSFNSLESVKKGVILYTTKENDT HHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCEEEEEECCCCH VESVSKLVGISQEEIIAWNDLRSKDLKVGMKLVLTEPDFLKPYVVKKGDSLSKLAQDFDI HHHHHHHHCCCHHHEEEECCCCCCHHHCCEEEEEECCCCCCCEEEECCCHHHHHHHHCCC SSKDILKFNFLNDDKLKIGQRLFLKKATESVNFHYVKKGETLGRIAYIYSLTARDLVALN CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHEEEEEEEEHHHHEEEEC GNRAVNLKAGSLLNVLKIVNNDLEKPFEKDLKIEEKTGNQFIYHSVAVGETLYSIARHYG CCEEEEEECHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEEEEEEHHHHHHHHHHHHHHH VLIEDLKNWNNLSSNNIMHDQKLKIFDKKLLLDSSIIKSKNDSDIKNKVDSSANSSNKVQ HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE TIVNFPSSKNKKLNLNTFGTTVNQDLFDISSLVILDSKIPIFEVVGDFYYWYRPKKISQP EEEECCCCCCCEEEEEECCCCCCCHHHHHHEEEEEECCCCHHHHHHHHHHEECCCCCCCC SEFYSEDWHSPLNSYKKATQLFKSFEKLVNSRFNKGSRLKDKLIILDPGHGGLDPGAIVK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEE SRDGLGNEVFVVEDEYVYDIALRLYVYLKQEGANVELTILAPDHLIRNSVFANNTFVNVK CCCCCCCEEEEEECCHHHHHHHHHEEEEEECCCCEEEEEECCHHHHHCCEECCCCEEEEH NEIYNDYDLNKNDTVDSWISGTPSGLKKRLVVVKNIVSKYKNIKDKDIAFFSLHADNSVG HHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC APKSMGFYYQKDDEKKYDIHSKSVAEKITEGMKRSFYIKGQNLHVLRNNIVMTKLLIEVR CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHH NLAFPEEAWSIRSSKLRDQDSKILANGILKILENN HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1679432; 12663927 [H]