Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598711
Identifier: 51598711
GI number: 51598711
Start: 476884
End: 477873
Strand: Direct
Name: 51598711
Synonym: BG0464
Alternate gene names: NA
Gene position: 476884-477873 (Clockwise)
Preceding gene: 51598709
Following gene: 51598712
Centisome position: 52.74
GC content: 22.73
Gene sequence:
>990_bases ATGCAAGTGGTTTATTTATTATTGGGTAGTGAGCAAGGCTTAAAAGAAGCTTATTTAAAAGAGTTGCTAGTCAAGATGGA TGCTTTTAAATCGAAAGTTTTAGTTACTAAAATTTTTTTGTCAGAACTCTCAGTTGTGGAATTTGTTGAGAAGCTATTTT CCAATTCTTTTTTTTCAGAAAAAGAAATTTTTATTGTTTATGAGTCTGAACTTTTAAAAGCAGATAAAGATTTAGAACTA GTATGTAATGCAATTTTAAAGTCTAGCAATAAAACTATTATTTTTGTTTCTAATAGCAATACATGTAACATTGATTTTAA GGGTAAGCTTAAGTTTATAAAAAAAGTTTTTTATGAAATTCCTGATGATGACAAATTTACATTTGTAAAAAGAAATTTTT TTAATCTTAATATTAAAATTACAGATTCTGCAATAAATTTAATGCTTTTAATGTTAAATTCAGATACTAAAATTTTAAAA TTTTATATAGATTCTTTTGCGCTTTTTGCCAAGAACAACACCATTGATGAGGAAGATATAACTTCTTGGATTAGCTTTGT TCGTTTTGAAAACACTTTTTCTTTATTTAATTCAATTTTAAAAAAACATATGGAGCATTCTTTGATAAAGATTAAGTCTA TTTTGGATCAGGGAGAAGATTTTCTTAATGTTTTGATGAGTCTTATTTGGCAATTTAAAAGATTGTTAAAGGTGCAAATA GATTACAATACATGTGGAAGCTTACAGAGTGCATTGAATAAAAATAAAATTTTTTTTTCATTAAATAAAATTTATAGAGT AGGGGTTAAAAATTATTCAATTGAGGAAATAAAAATTGTTTTGAAAATTTTATATAAGTTTGATTTATATTTGAGGATTT ATTCTAAAAATATTCATCAAAATTTGTCATATTTTTTAATATTTTCAATCTTAAATTTTAATAATAACTTTTTAATAGAT TGTTCCAAAGAATCAAAATTTAATTTTTAA
Upstream 100 bases:
>100_bases TTTTTTTCTGGAATATAAGTATCTGTAAATATTGCAACTTTCATATTCTCCTCCTAGCTTAAGTATAATATATTTAATAC TTGGATTATAATTTACTTTG
Downstream 100 bases:
>100_bases TCTATGAAGCAAAAATTAATTTGGATTTTATTGTTTTGTTTTTTATCTTGTAGATATGAATTTAGGTTGGCGGAAATTGT TTTAATAGAGTTTTTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQVVYLLLGSEQGLKEAYLKELLVKMDAFKSKVLVTKIFLSELSVVEFVEKLFSNSFFSEKEIFIVYESELLKADKDLEL VCNAILKSSNKTIIFVSNSNTCNIDFKGKLKFIKKVFYEIPDDDKFTFVKRNFFNLNIKITDSAINLMLLMLNSDTKILK FYIDSFALFAKNNTIDEEDITSWISFVRFENTFSLFNSILKKHMEHSLIKIKSILDQGEDFLNVLMSLIWQFKRLLKVQI DYNTCGSLQSALNKNKIFFSLNKIYRVGVKNYSIEEIKIVLKILYKFDLYLRIYSKNIHQNLSYFLIFSILNFNNNFLID CSKESKFNF
Sequences:
>Translated_329_residues MQVVYLLLGSEQGLKEAYLKELLVKMDAFKSKVLVTKIFLSELSVVEFVEKLFSNSFFSEKEIFIVYESELLKADKDLEL VCNAILKSSNKTIIFVSNSNTCNIDFKGKLKFIKKVFYEIPDDDKFTFVKRNFFNLNIKITDSAINLMLLMLNSDTKILK FYIDSFALFAKNNTIDEEDITSWISFVRFENTFSLFNSILKKHMEHSLIKIKSILDQGEDFLNVLMSLIWQFKRLLKVQI DYNTCGSLQSALNKNKIFFSLNKIYRVGVKNYSIEEIKIVLKILYKFDLYLRIYSKNIHQNLSYFLIFSILNFNNNFLID CSKESKFNF >Mature_329_residues MQVVYLLLGSEQGLKEAYLKELLVKMDAFKSKVLVTKIFLSELSVVEFVEKLFSNSFFSEKEIFIVYESELLKADKDLEL VCNAILKSSNKTIIFVSNSNTCNIDFKGKLKFIKKVFYEIPDDDKFTFVKRNFFNLNIKITDSAINLMLLMLNSDTKILK FYIDSFALFAKNNTIDEEDITSWISFVRFENTFSLFNSILKKHMEHSLIKIKSILDQGEDFLNVLMSLIWQFKRLLKVQI DYNTCGSLQSALNKNKIFFSLNKIYRVGVKNYSIEEIKIVLKILYKFDLYLRIYSKNIHQNLSYFLIFSILNFNNNFLID CSKESKFNF
Specific function: Unknown
COG id: COG1466
COG function: function code L; DNA polymerase III, delta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38656; Mature: 38656
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVVYLLLGSEQGLKEAYLKELLVKMDAFKSKVLVTKIFLSELSVVEFVEKLFSNSFFSE CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KEIFIVYESELLKADKDLELVCNAILKSSNKTIIFVSNSNTCNIDFKGKLKFIKKVFYEI CEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHC PDDDKFTFVKRNFFNLNIKITDSAINLMLLMLNSDTKILKFYIDSFALFAKNNTIDEEDI CCCCCEEEEEEEEEEEEEEEECHHEEEEEEEECCCCHHHHHHHHHHHEEECCCCCCHHHH TSWISFVRFENTFSLFNSILKKHMEHSLIKIKSILDQGEDFLNVLMSLIWQFKRLLKVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE DYNTCGSLQSALNKNKIFFSLNKIYRVGVKNYSIEEIKIVLKILYKFDLYLRIYSKNIHQ CCCCHHHHHHHHCCCCEEEEEEHHHEECCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHC NLSYFLIFSILNFNNNFLIDCSKESKFNF CHHHHHHHHHHCCCCCEEEEECCCCCCCC >Mature Secondary Structure MQVVYLLLGSEQGLKEAYLKELLVKMDAFKSKVLVTKIFLSELSVVEFVEKLFSNSFFSE CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KEIFIVYESELLKADKDLELVCNAILKSSNKTIIFVSNSNTCNIDFKGKLKFIKKVFYEI CEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHC PDDDKFTFVKRNFFNLNIKITDSAINLMLLMLNSDTKILKFYIDSFALFAKNNTIDEEDI CCCCCEEEEEEEEEEEEEEEECHHEEEEEEEECCCCHHHHHHHHHHHEEECCCCCCHHHH TSWISFVRFENTFSLFNSILKKHMEHSLIKIKSILDQGEDFLNVLMSLIWQFKRLLKVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE DYNTCGSLQSALNKNKIFFSLNKIYRVGVKNYSIEEIKIVLKILYKFDLYLRIYSKNIHQ CCCCHHHHHHHHCCCCEEEEEEHHHEECCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHC NLSYFLIFSILNFNNNFLIDCSKESKFNF CHHHHHHHHHHCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA