Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598712
Identifier: 51598712
GI number: 51598712
Start: 477940
End: 478518
Strand: Direct
Name: 51598712
Synonym: BG0465
Alternate gene names: NA
Gene position: 477940-478518 (Clockwise)
Preceding gene: 51598711
Following gene: 51598714
Centisome position: 52.86
GC content: 24.18
Gene sequence:
>579_bases TTGGCGGAAATTGTTTTAATAGAGTTTTTTGATTCTATTAAAAATTTGCAAAGCAGTCCTGAAATATTTTTTAACTATTT AAATATTCCAAGTGATGATGATCTGAGGGCAAAAATTTTTGGATTAAAATCTCAGGCAAAGGATGATTTTATTTTTTATC CTTTGTTTTTTAATAATCTAAGATATGAAATAATAGGTAAAAAAAATATTTCTAAGGGCTTTGAATTTGAAGTTATTATT AAAAATATTAACTTCAAAAACGGGATAGAAAAATTTTTGGTCAAATTAAATAAAATTGAAGTAGGATCTTCAAAGATTAA AAACTTAGGGGAAAAAGAGCGTAAAAAAATATTTGACAATTTAATAAATGAAGTTGTTGGAGAGTTAGATAATTTTGATT ACACTGAGATTGTTCATTTTTTTAGAGTAGTCAAGAGTTCTTCCGGAGACTATAAAATAGAGCTTTTGGGAGATGTTTTA AATATACAAGTTAGAAACAAGCTTATTAATGAACTTTTTTTAGTTTTATCGCCTGGAATTTCCAATAGTGTTTTAATTTT AAAAAATATTAATAAATAA
Upstream 100 bases:
>100_bases AGATTGTTCCAAAGAATCAAAATTTAATTTTTAATCTATGAAGCAAAAATTAATTTGGATTTTATTGTTTTGTTTTTTAT CTTGTAGATATGAATTTAGG
Downstream 100 bases:
>100_bases TAATCTAGTTTAAATTTTGTAATTTTATCGTTACTTGAGGAAGTACATAAAATTTTAATTGAATTTAAAATTTATTTATC GTTATCAATATTTTTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAEIVLIEFFDSIKNLQSSPEIFFNYLNIPSDDDLRAKIFGLKSQAKDDFIFYPLFFNNLRYEIIGKKNISKGFEFEVII KNINFKNGIEKFLVKLNKIEVGSSKIKNLGEKERKKIFDNLINEVVGELDNFDYTEIVHFFRVVKSSSGDYKIELLGDVL NIQVRNKLINELFLVLSPGISNSVLILKNINK
Sequences:
>Translated_192_residues MAEIVLIEFFDSIKNLQSSPEIFFNYLNIPSDDDLRAKIFGLKSQAKDDFIFYPLFFNNLRYEIIGKKNISKGFEFEVII KNINFKNGIEKFLVKLNKIEVGSSKIKNLGEKERKKIFDNLINEVVGELDNFDYTEIVHFFRVVKSSSGDYKIELLGDVL NIQVRNKLINELFLVLSPGISNSVLILKNINK >Mature_191_residues AEIVLIEFFDSIKNLQSSPEIFFNYLNIPSDDDLRAKIFGLKSQAKDDFIFYPLFFNNLRYEIIGKKNISKGFEFEVIIK NINFKNGIEKFLVKLNKIEVGSSKIKNLGEKERKKIFDNLINEVVGELDNFDYTEIVHFFRVVKSSSGDYKIELLGDVLN IQVRNKLINELFLVLSPGISNSVLILKNINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22208; Mature: 22077
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVLIEFFDSIKNLQSSPEIFFNYLNIPSDDDLRAKIFGLKSQAKDDFIFYPLFFNNL CCEEEEHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHHEECCCCCCCCCEEEEEEHHCCE RYEIIGKKNISKGFEFEVIIKNINFKNGIEKFLVKLNKIEVGSSKIKNLGEKERKKIFDN EEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH LINEVVGELDNFDYTEIVHFFRVVKSSSGDYKIELLGDVLNIQVRNKLINELFLVLSPGI HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC SNSVLILKNINK CCCEEEEEECCC >Mature Secondary Structure AEIVLIEFFDSIKNLQSSPEIFFNYLNIPSDDDLRAKIFGLKSQAKDDFIFYPLFFNNL CEEEEHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHHEECCCCCCCCCEEEEEEHHCCE RYEIIGKKNISKGFEFEVIIKNINFKNGIEKFLVKLNKIEVGSSKIKNLGEKERKKIFDN EEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHH LINEVVGELDNFDYTEIVHFFRVVKSSSGDYKIELLGDVLNIQVRNKLINELFLVLSPGI HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC SNSVLILKNINK CCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA