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The map label for this gene is ccsB [H]

Identifier: 50841813

GI number: 50841813

Start: 376261

End: 377772

Strand: Direct

Name: ccsB [H]

Synonym: PPA0327

Alternate gene names: 50841813

Gene position: 376261-377772 (Clockwise)

Preceding gene: 50841812

Following gene: 50841814

Centisome position: 14.7

GC content: 59.06

Gene sequence:

>1512_bases
ATGCGTTGGGTGTGGGGCCAGTTGACGAGCATGAGGACGGCCCTCATTTTGCTCTTTTTGCTTGCGCTAGCTGCCATCCC
AGGCTCGGTGGTGCCGCAGAGCGCTCAGAGCGCGATGAAGGTTTCTGACTTCGCCGCCAACCATCCGACTCTGGACCGCA
TATGTCGTCCGCTGGGGATGTACCACGTCTACACCTCGGTGTGGTTCTCGGCGATCTACCTCCTGTTGTTGATAAGCCTT
ATCGGCTGCATTGTTCCGCGCATCGTCAGCCACGCGAAGGCCCTGCGCCGTCAACCTCCCCGCGTTCCGGCCAGGCTGGA
CCGGCTAGCAGCCCACGCCTCGATGATCACCTCCGCTTCCGCAGTGGAGGTTAGTCAACGCGCTCAGCAGTGGTTGACAT
CACACCGGTATCGGTTCGTTGTTGACGACGACGGCTCCCTTCGCGCCGAGGCCGGACGTCATCGCGAGACGGGCAACCTC
GTATTCCATATTTTCTTGGTCTTTGTCCTTGTTGGCGTCGGCTGGAACACTTTATGGGGGTTCAAGGGAACTTCTGTCGT
TGTGGAGGGTCAGGGTTTTTCTAACAGCATCACTCAGTACGACGAATTCAAGGCTGGGGCGATGGTCGATACCGATAATC
TCACCCCGTTTTCCATGAAGCTGCGCAAATTCGTGGTCTCTTTTGAGACTGGTACGGTGCAGCGCGGCGCCGCCCGTTCC
TTCGACGCCACTGTCGACCTCACCATGGGCGGCAAGACGCAGACCCGAGATTTGCAGGTCAACCACCCACTGCGGATTGG
ATCAACAAAGGTACACCTGCTTGGGCACGGATACGCCGCGGATGTCGTCGTCCGTGACGGTGATGGCAAGGTGGCTTATT
CCGGACCGGTTGTCTTTTTGCCACAGGACGCCAACTTCAAGTCTGTCGGCGTCATCAAAGTTCCCGACGCCCGTCCGGAT
CGTCTGGCCTTTCAAGGGTTCTTTCTACCGACTGGCGCCATCACGGCCGGTGGTCCGACGTCCCTTTTCCCCGACGCCCT
TAACCCGCAGCTGTATCTGACCGCGTGGTATGGCAAACCGACTGTGGAGACGGGGGTGCCGTCAAATATTTACACCCTCG
ACACCACGGGACTGACCCAGGTGACGAACGGTAAGGACAAGGCCCGCTTTGTGCTATCCCCAGGTCAGAGGTACAAACTG
CCCGACGGCAAGGGGTCGATCCAGTTCAATGGCTGGCAGAGGTGGGCCAAGATCCAGGTGTCCCAGAACCCGGGGCTCCC
GTTGACGTTCTTGTCGGTGGTGCTGTCAGTGGCAGGGCTATGTGTGAGCTTGTTTTCGCGGTCCCGGCGGGTGTGGGTGA
GGACTATTCCTGGTGATGACGGCTTGAGAGTAGAGATTGGTGGCCTAGATCGCAGTGACTCCCGATCCGGGGCTGTGGAC
GACGTAAACTCTCTGCTGGCTGCACTACATGGGGATAGCATGTCTGGCGATGTCGGGGAGGAGCACTCGTGA

Upstream 100 bases:

>100_bases
CTAAGTTCGGGGCGGTGATCTGATGGGCGATTCCGTGACGGATTCGAAAGTGACGACGGCCTCACCGTCTGGGAACAGCG
GGCTGGGTTTTCGCCCATTC

Downstream 100 bases:

>100_bases
GTGTGGAGAATCTGTCTGCCGTTGGGATCGTCACCGCGGCGGTGCTCTATATGCTTGCCTTCCTCGCCCACGCCGTGGAG
TGGGCCAGTGTGCGGGGGAC

Product: putative c-type cytochrome biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGMYHVYTSVWFSAIYLLLLISL
IGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSASAVEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNL
VFHIFLVFVLVGVGWNTLWGFKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS
FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFLPQDANFKSVGVIKVPDARPD
RLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKPTVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKL
PDGKGSIQFNGWQRWAKIQVSQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD
DVNSLLAALHGDSMSGDVGEEHS

Sequences:

>Translated_503_residues
MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGMYHVYTSVWFSAIYLLLLISL
IGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSASAVEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNL
VFHIFLVFVLVGVGWNTLWGFKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS
FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFLPQDANFKSVGVIKVPDARPD
RLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKPTVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKL
PDGKGSIQFNGWQRWAKIQVSQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD
DVNSLLAALHGDSMSGDVGEEHS
>Mature_503_residues
MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGMYHVYTSVWFSAIYLLLLISL
IGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSASAVEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNL
VFHIFLVFVLVGVGWNTLWGFKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS
FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFLPQDANFKSVGVIKVPDARPD
RLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKPTVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKL
PDGKGSIQFNGWQRWAKIQVSQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD
DVNSLLAALHGDSMSGDVGEEHS

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 54769; Mature: 54769

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YHVYTSVWFSAIYLLLLISLIGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNLVFHIFLVFVLVGVGWNTLWG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCC
FKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS
CCCCEEEEECCCCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCC
FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFL
CCCEEEEEECCCCCCCEEEECCCEEECCEEEEEEECCEEEEEEEECCCCEEEECCCEEEE
PQDANFKSVGVIKVPDARPDRLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKP
ECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
TVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKLPDGKGSIQFNGWQRWAKIQV
CCCCCCCCCEEEECCCCCEEECCCCCCEEEEECCCCEEECCCCCCCEEECCEEEEEEEEE
SQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHH
DVNSLLAALHGDSMSGDVGEEHS
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWVWGQLTSMRTALILLFLLALAAIPGSVVPQSAQSAMKVSDFAANHPTLDRICRPLGM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
YHVYTSVWFSAIYLLLLISLIGCIVPRIVSHAKALRRQPPRVPARLDRLAAHASMITSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVEVSQRAQQWLTSHRYRFVVDDDGSLRAEAGRHRETGNLVFHIFLVFVLVGVGWNTLWG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCC
FKGTSVVVEGQGFSNSITQYDEFKAGAMVDTDNLTPFSMKLRKFVVSFETGTVQRGAARS
CCCCEEEEECCCCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCC
FDATVDLTMGGKTQTRDLQVNHPLRIGSTKVHLLGHGYAADVVVRDGDGKVAYSGPVVFL
CCCEEEEEECCCCCCCEEEECCCEEECCEEEEEEECCEEEEEEEECCCCEEEECCCEEEE
PQDANFKSVGVIKVPDARPDRLAFQGFFLPTGAITAGGPTSLFPDALNPQLYLTAWYGKP
ECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
TVETGVPSNIYTLDTTGLTQVTNGKDKARFVLSPGQRYKLPDGKGSIQFNGWQRWAKIQV
CCCCCCCCCEEEECCCCCEEECCCCCCEEEEECCCCEEECCCCCCCEEECCEEEEEEEEE
SQNPGLPLTFLSVVLSVAGLCVSLFSRSRRVWVRTIPGDDGLRVEIGGLDRSDSRSGAVD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHH
DVNSLLAALHGDSMSGDVGEEHS
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA