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The map label for this gene is ttuB [H]

Identifier: 50841784

GI number: 50841784

Start: 345249

End: 346568

Strand: Reverse

Name: ttuB [H]

Synonym: PPA0295

Alternate gene names: 50841784

Gene position: 346568-345249 (Counterclockwise)

Preceding gene: 50841785

Following gene: 50841783

Centisome position: 13.54

GC content: 58.11

Gene sequence:

>1320_bases
ATGGCCATTAACTCAGTCAATAATTTAGAAACGACCGACAAGGCCGACGCGAGCAAACCTCCGGCGAAGCGCTGGGTCTA
TGTGATCCCCGTAGCCGTGATTATGTACATGTTGGCGTACCTCGACCGGACCAACACGGCGATGATCCTGCCGTACATCA
ACTCAGATACCTCTAGCCAGATTCATCTCACCAAGGCCGATGAGGGCATCGTGAGCGGCATCTTCTTCTTCGGCTACATG
TTCCTGCAGATCCCAGCCGCGATCCTCGCAGAACGTTGGAGTGCGAAGAAGACTGTCGCGATCCTCATGTTCCTTTGGGG
ATTTGCCGCCATGGCGGTCTCCTTTGTCCAGTCCAACGGCCAGTTCTATACCGCACGATTCGTCCTCGGCTTTTTCGAAG
GTGGCGTATGGCCCTCGGTGCTCATCCTCATCGCCAACTGGTTCCCGCTCAAAGAGCGTGCCAGGGCCAATTCCCTGTGG
ATGTGCTGCCTACCCCTGTCATCGGTGCTCATTTCCCCGATCACCGGAGCACTCCTCGACCATTTCAGTTGGCGGACGGT
ACTCTTCGTGGAAGGAATCCCGCCACTGATATGGGCGATCGTATGGCTCTTAGTCGTCTCCGACCACCCTCATAATGCGA
AATGGGCATCCGACGCCGAACGAGAGTACATCGAGGCCGAACTGACCGCCGACGAAGCCAACAAACCCATCATCGATGGC
GATGGTGGGTATCTAGCCGCCGCCCGCAGCGCACACGTGTGGCAACTCATTACCATCTACCTGTGTTTCATGGGCGGTTT
CTATGGTTACACCCTGTGGCTTCCCACCGTGGTCAAGGGGCTCATGTCCGGCTCATCGGCATCGTCCGTCGGACTCGTCA
CTGCCATTCCGTACATCTTCGCGGTCGTCGGGATGCTGGCTGTGTCGTCCTGGAGTGACCATACCGGAAACAGGCGTGTG
GCCATCGCGGTCCCGCTCGCCATCGGTGCCGTCGCGCTCACCATCGGCCAGGTAGTACACCATCCGATCGTCAACATCGT
TCTTCTGGTAATCGTTGCCATCGGGGTGTACTCGCCATATGGCCCGTACTGGGCCGTTCCAGGGGCCTACCTCAGAATCG
AGGTTCTCGCAGGAGGACTCGGTCTAATCAATGCATTAGGCAACCTGGGTGGGTTCGTCGGCCCGTACCTTGTCGGTTGG
CTGACCGACGTCACGGGATCTGCTGCGACGGGCTACTACGCCCTAGCCGGATTGCTCGTCGTCGGCGCGGTCCTCACATG
GGTTGTCGTCAAGCCGAAGATCACTCCGACAACACCGTAA

Upstream 100 bases:

>100_bases
CGAGATTTGTTCCGGTAATTCGAGAAGAGTATTTACCGAGCACAGGCCGCAACTGATGATTTCGAGGACGTCTATCTTCG
ATAATCTCAGGGGGTATTCC

Downstream 100 bases:

>100_bases
GGTCCCGTCGAAACTTCACTCGCATCTGCCCCAGGACTGTTCGCGTCGACCCTTTTCTGGACAGGCTCAATGTGACCCAT
CCCCGGAATTTCCGGTCAAT

Product: putative sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MAINSVNNLETTDKADASKPPAKRWVYVIPVAVIMYMLAYLDRTNTAMILPYINSDTSSQIHLTKADEGIVSGIFFFGYM
FLQIPAAILAERWSAKKTVAILMFLWGFAAMAVSFVQSNGQFYTARFVLGFFEGGVWPSVLILIANWFPLKERARANSLW
MCCLPLSSVLISPITGALLDHFSWRTVLFVEGIPPLIWAIVWLLVVSDHPHNAKWASDAEREYIEAELTADEANKPIIDG
DGGYLAAARSAHVWQLITIYLCFMGGFYGYTLWLPTVVKGLMSGSSASSVGLVTAIPYIFAVVGMLAVSSWSDHTGNRRV
AIAVPLAIGAVALTIGQVVHHPIVNIVLLVIVAIGVYSPYGPYWAVPGAYLRIEVLAGGLGLINALGNLGGFVGPYLVGW
LTDVTGSAATGYYALAGLLVVGAVLTWVVVKPKITPTTP

Sequences:

>Translated_439_residues
MAINSVNNLETTDKADASKPPAKRWVYVIPVAVIMYMLAYLDRTNTAMILPYINSDTSSQIHLTKADEGIVSGIFFFGYM
FLQIPAAILAERWSAKKTVAILMFLWGFAAMAVSFVQSNGQFYTARFVLGFFEGGVWPSVLILIANWFPLKERARANSLW
MCCLPLSSVLISPITGALLDHFSWRTVLFVEGIPPLIWAIVWLLVVSDHPHNAKWASDAEREYIEAELTADEANKPIIDG
DGGYLAAARSAHVWQLITIYLCFMGGFYGYTLWLPTVVKGLMSGSSASSVGLVTAIPYIFAVVGMLAVSSWSDHTGNRRV
AIAVPLAIGAVALTIGQVVHHPIVNIVLLVIVAIGVYSPYGPYWAVPGAYLRIEVLAGGLGLINALGNLGGFVGPYLVGW
LTDVTGSAATGYYALAGLLVVGAVLTWVVVKPKITPTTP
>Mature_438_residues
AINSVNNLETTDKADASKPPAKRWVYVIPVAVIMYMLAYLDRTNTAMILPYINSDTSSQIHLTKADEGIVSGIFFFGYMF
LQIPAAILAERWSAKKTVAILMFLWGFAAMAVSFVQSNGQFYTARFVLGFFEGGVWPSVLILIANWFPLKERARANSLWM
CCLPLSSVLISPITGALLDHFSWRTVLFVEGIPPLIWAIVWLLVVSDHPHNAKWASDAEREYIEAELTADEANKPIIDGD
GGYLAAARSAHVWQLITIYLCFMGGFYGYTLWLPTVVKGLMSGSSASSVGLVTAIPYIFAVVGMLAVSSWSDHTGNRRVA
IAVPLAIGAVALTIGQVVHHPIVNIVLLVIVAIGVYSPYGPYWAVPGAYLRIEVLAGGLGLINALGNLGGFVGPYLVGWL
TDVTGSAATGYYALAGLLVVGAVLTWVVVKPKITPTTP

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI21322234, Length=410, Percent_Identity=23.4146341463415, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI9945322, Length=386, Percent_Identity=24.6113989637306, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI9966811, Length=382, Percent_Identity=25.130890052356, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI6912666, Length=413, Percent_Identity=22.0338983050847, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI223718438, Length=222, Percent_Identity=23.8738738738739, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI148743791, Length=251, Percent_Identity=24.7011952191235, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87082071, Length=413, Percent_Identity=29.7820823244552, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI87082320, Length=436, Percent_Identity=24.3119266055046, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789152, Length=454, Percent_Identity=24.0088105726872, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789515, Length=420, Percent_Identity=21.9047619047619, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI2367379, Length=432, Percent_Identity=21.0648148148148, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115533556, Length=460, Percent_Identity=23.0434782608696, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115533554, Length=454, Percent_Identity=23.1277533039648, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17552542, Length=421, Percent_Identity=23.2779097387173, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17554962, Length=323, Percent_Identity=24.1486068111455, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560030, Length=160, Percent_Identity=30, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17566884, Length=267, Percent_Identity=25.8426966292135, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193205400, Length=247, Percent_Identity=24.2914979757085, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32565916, Length=119, Percent_Identity=26.890756302521, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32565914, Length=119, Percent_Identity=26.890756302521, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71997452, Length=288, Percent_Identity=24.3055555555556, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17554148, Length=325, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321698, Length=367, Percent_Identity=21.2534059945504, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI20130167, Length=353, Percent_Identity=23.7960339943343, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24584153, Length=373, Percent_Identity=23.3243967828418, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24653727, Length=424, Percent_Identity=25.2358490566038, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19922400, Length=370, Percent_Identity=24.8648648648649, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24654215, Length=370, Percent_Identity=24.8648648648649, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24648416, Length=393, Percent_Identity=24.6819338422392, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356189, Length=393, Percent_Identity=24.6819338422392, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573299, Length=424, Percent_Identity=22.877358490566, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24583789, Length=428, Percent_Identity=21.7289719626168, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24639764, Length=444, Percent_Identity=23.4234234234234, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28573708, Length=269, Percent_Identity=23.4200743494424, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28573707, Length=269, Percent_Identity=23.4200743494424, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45550460, Length=316, Percent_Identity=23.1012658227848, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24580790, Length=361, Percent_Identity=23.5457063711911, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24655255, Length=301, Percent_Identity=23.2558139534884, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24658696, Length=297, Percent_Identity=22.5589225589226, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24641682, Length=189, Percent_Identity=26.4550264550265, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI62484226, Length=311, Percent_Identity=24.1157556270096, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24658658, Length=234, Percent_Identity=24.7863247863248, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655271, Length=389, Percent_Identity=22.107969151671, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20130135, Length=389, Percent_Identity=22.107969151671, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47461; Mature: 47330

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINSVNNLETTDKADASKPPAKRWVYVIPVAVIMYMLAYLDRTNTAMILPYINSDTSSQ
CCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE
IHLTKADEGIVSGIFFFGYMFLQIPAAILAERWSAKKTVAILMFLWGFAAMAVSFVQSNG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
QFYTARFVLGFFEGGVWPSVLILIANWFPLKERARANSLWMCCLPLSSVLISPITGALLD
CEEEHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
HFSWRTVLFVEGIPPLIWAIVWLLVVSDHPHNAKWASDAEREYIEAELTADEANKPIIDG
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCCCEEEC
DGGYLAAARSAHVWQLITIYLCFMGGFYGYTLWLPTVVKGLMSGSSASSVGLVTAIPYIF
CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AVVGMLAVSSWSDHTGNRRVAIAVPLAIGAVALTIGQVVHHPIVNIVLLVIVAIGVYSPY
HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPYWAVPGAYLRIEVLAGGLGLINALGNLGGFVGPYLVGWLTDVTGSAATGYYALAGLLV
CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VGAVLTWVVVKPKITPTTP
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AINSVNNLETTDKADASKPPAKRWVYVIPVAVIMYMLAYLDRTNTAMILPYINSDTSSQ
CCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE
IHLTKADEGIVSGIFFFGYMFLQIPAAILAERWSAKKTVAILMFLWGFAAMAVSFVQSNG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
QFYTARFVLGFFEGGVWPSVLILIANWFPLKERARANSLWMCCLPLSSVLISPITGALLD
CEEEHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
HFSWRTVLFVEGIPPLIWAIVWLLVVSDHPHNAKWASDAEREYIEAELTADEANKPIIDG
CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCCCEEEC
DGGYLAAARSAHVWQLITIYLCFMGGFYGYTLWLPTVVKGLMSGSSASSVGLVTAIPYIF
CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AVVGMLAVSSWSDHTGNRRVAIAVPLAIGAVALTIGQVVHHPIVNIVLLVIVAIGVYSPY
HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPYWAVPGAYLRIEVLAGGLGLINALGNLGGFVGPYLVGWLTDVTGSAATGYYALAGLLV
CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VGAVLTWVVVKPKITPTTP
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]