Definition | Propionibacterium acnes KPA171202, complete genome. |
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Accession | NC_006085 |
Length | 2,560,265 |
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The map label for this gene is disA [H]
Identifier: 229259642
GI number: 229259642
Start: 362009
End: 363055
Strand: Reverse
Name: disA [H]
Synonym: PPA0311
Alternate gene names: 229259642
Gene position: 363055-362009 (Counterclockwise)
Preceding gene: 50841799
Following gene: 50841794
Centisome position: 14.18
GC content: 59.6
Gene sequence:
>1047_bases GTGCGCCATCTAATGGCCCTCTTGGCCCCTGGCACGCCCATCCGGGAAGGACTAGATCGCATCGTTAACGGACGCACTGG TGGTCTCATCGTGCTCGGTGATGGGCCAGAGATCAACGGGGTTTGTTCCGGCGGATTCCCCCTTGACGTCAGACTCACCC CGCAGGCTCTGCGCGAGCTATCCAAGATGGACGGTGGGCTAGTGGTCTCGAGTGATCACGAGCGCATCAAAGCAGCTGCG GTCCACTTCGTCCCCGACGGTAGCCTGCCCACGTTGGAGACTGGTACCCGTCACCGCACGGCAGATCGGCTCTCCCAACA AACCGGTGTGCCGGTGGTAGTCGTCTCGGCGTCGATGTCAGTGATGTCGCTCTTCCTTAACGGCCGTCGGTACCTGATCG AGAGGCCTGAACAGTTGCTCGCTCGAGCCAATCAGGCCCTTGCCACCCTGGCAAGCTACCGCGGGCGTCTGGTCGACGAG GCCGAGAACCTCACCACCTTAGAGATTCGCGACCAAGTCCAGGTGCGTGACGTCGCCGCTGTCGCCCAGCGGGTCGAAAT GTGGCGTCGTATCGATGCCGAGGTCCGTGGATATGTCTCTGCTCTGGGTGTGGAGGGACGCCTTGTCCAATTACAACGCA ACGAACTGTCCCTAGGCGTAGAAGACCTAGGCCGGTTGCTCACTGATGACTATCGTCCCAATTCCGTCGCTCCTGGCGGG TTTTCCCTGTCAGGATTACAGAAACTGTCCTGGGAAGATCTGCTCAATGTGACCATGGTGGCCGAGACCATCAACCTCGG TCCTGCTGAACACCCGCTGGATTCCCCCATTCGGGCACGCGGTCATCGACAGCTGACACTCATGACGGACCTGTCGTCAC GCACAATCCAGCGGATTATTGACCACTTCAGCGATCTGCAAAGCCTGGTGTCAGCATCCACCTCCGAGCTCGGCGATATT AAGGGGGTCGGCCTCAGACGGGCCCGTGAAATTCGCCAAGGGTTAGAGTCGATCTTTGAAGGCGATCAGCGCACCCATCA TCATTAG
Upstream 100 bases:
>100_bases GGACATCTGAGGTGAGAACCGCGGCACAGCGAACTAGAGTCGACTCATGAACGACGTCCAGCCCGATCCCGAGACGTCCC GGGAGATGCAGGCGGAACAG
Downstream 100 bases:
>100_bases ATCCGCATATGCATTGACACGTGTGTCGACAGGGTTCAGGTACCCATCCGCATAACGAAGCGGCCGCTAGGGCCGCCACC GAGATTTACAGTGGCGACAT
Product: DNA integrity scanning protein DisA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVCSGGFPLDVRLTPQALRELSKMDGGLVVSSDHERIKAAA VHFVPDGSLPTLETGTRHRTADRLSQQTGVPVVVVSASMSVMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLVDE AENLTTLEIRDQVQVRDVAAVAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVEDLGRLLTDDYRPNSVAPGG FSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGHRQLTLMTDLSSRTIQRIIDHFSDLQSLVSASTSELGDI KGVGLRRAREIRQGLESIFEGDQRTHHH
Sequences:
>Translated_348_residues MRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVCSGGFPLDVRLTPQALRELSKMDGGLVVSSDHERIKAAA VHFVPDGSLPTLETGTRHRTADRLSQQTGVPVVVVSASMSVMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLVDE AENLTTLEIRDQVQVRDVAAVAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVEDLGRLLTDDYRPNSVAPGG FSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGHRQLTLMTDLSSRTIQRIIDHFSDLQSLVSASTSELGDI KGVGLRRAREIRQGLESIFEGDQRTHHH >Mature_348_residues MRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVCSGGFPLDVRLTPQALRELSKMDGGLVVSSDHERIKAAA VHFVPDGSLPTLETGTRHRTADRLSQQTGVPVVVVSASMSVMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLVDE AENLTTLEIRDQVQVRDVAAVAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVEDLGRLLTDDYRPNSVAPGG FSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGHRQLTLMTDLSSRTIQRIIDHFSDLQSLVSASTSELGDI KGVGLRRAREIRQGLESIFEGDQRTHHH
Specific function: Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions [H]
COG id: COG1623
COG function: function code R; Predicted nucleic-acid-binding protein (contains the HHH domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018906 - InterPro: IPR003390 - InterPro: IPR010994 [H]
Pfam domain/function: PF10635 DisA-linker; PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 38171; Mature: 38171
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVCSGGFPLDVRLTPQALREL CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCEEEEEECHHHHHHH SKMDGGLVVSSDHERIKAAAVHFVPDGSLPTLETGTRHRTADRLSQQTGVPVVVVSASMS HHCCCCEEEECCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHH VMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLVDEAENLTTLEIRDQVQVRDVAA HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCHHHHHHHHH VAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVEDLGRLLTDDYRPNSVAPGG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC FSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGHRQLTLMTDLSSRTIQRII CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHH DHFSDLQSLVSASTSELGDIKGVGLRRAREIRQGLESIFEGDQRTHHH HHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRHLMALLAPGTPIREGLDRIVNGRTGGLIVLGDGPEINGVCSGGFPLDVRLTPQALREL CCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCEEEEEECHHHHHHH SKMDGGLVVSSDHERIKAAAVHFVPDGSLPTLETGTRHRTADRLSQQTGVPVVVVSASMS HHCCCCEEEECCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHH VMSLFLNGRRYLIERPEQLLARANQALATLASYRGRLVDEAENLTTLEIRDQVQVRDVAA HHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCHHHHHHHHH VAQRVEMWRRIDAEVRGYVSALGVEGRLVQLQRNELSLGVEDLGRLLTDDYRPNSVAPGG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC FSLSGLQKLSWEDLLNVTMVAETINLGPAEHPLDSPIRARGHRQLTLMTDLSSRTIQRII CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHH DHFSDLQSLVSASTSELGDIKGVGLRRAREIRQGLESIFEGDQRTHHH HHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA