Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is 50365166
Identifier: 50365166
GI number: 50365166
Start: 407075
End: 407329
Strand: Reverse
Name: 50365166
Synonym: Mfl350
Alternate gene names: NA
Gene position: 407329-407075 (Counterclockwise)
Preceding gene: 50365167
Following gene: 50365165
Centisome position: 51.35
GC content: 28.24
Gene sequence:
>255_bases ATGAGTCAATCAAAAGAAATGTCAATGCCAGAAGTTATTCAAGAAATAAATCGTTTGGCAAAAATCAAAAAGGATCGTGA ACTGACATCAGAAGAAAGTGCATATAGAGAAGAATTAAAAGTTCTATACTTGAATTACTTTAGAAATGGTTTTGAACAAC AATTAAAAAGTACAAAAGTAATAGATGCACAAGGAAATGATGTAACACCAAGCAAACTAAAGAATGAAGGAGATAAATAT GATAAACAAAAATAA
Upstream 100 bases:
>100_bases ATGAAAGTAACAATAAATATTCCTACAAGTAATGTTGAAGTTGAAACAACATTAAGAAAACCATTAGTTTAGTATAAAAT AAGTTTAAAGGGGTATTAAA
Downstream 100 bases:
>100_bases CAACAATTTAAATGCTTTAAGAATTTTAGGAGTTTCTGCAATTAATAAAGCAAATTCAGGTCACCCAGGTATTGTATTAG GCGCTGCACCAATCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSQSKEMSMPEVIQEINRLAKIKKDRELTSEESAYREELKVLYLNYFRNGFEQQLKSTKVIDAQGNDVTPSKLKNEGDKY DKQK
Sequences:
>Translated_84_residues MSQSKEMSMPEVIQEINRLAKIKKDRELTSEESAYREELKVLYLNYFRNGFEQQLKSTKVIDAQGNDVTPSKLKNEGDKY DKQK >Mature_83_residues SQSKEMSMPEVIQEINRLAKIKKDRELTSEESAYREELKVLYLNYFRNGFEQQLKSTKVIDAQGNDVTPSKLKNEGDKYD KQK
Specific function: Unknown
COG id: COG4224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0291 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009242 - InterPro: IPR023218 [H]
Pfam domain/function: PF05979 DUF896 [H]
EC number: NA
Molecular weight: Translated: 9860; Mature: 9729
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSKEMSMPEVIQEINRLAKIKKDRELTSEESAYREELKVLYLNYFRNGFEQQLKSTKV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDAQGNDVTPSKLKNEGDKYDKQK CCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SQSKEMSMPEVIQEINRLAKIKKDRELTSEESAYREELKVLYLNYFRNGFEQQLKSTKV CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDAQGNDVTPSKLKNEGDKYDKQK CCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]