Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is yqeH [H]
Identifier: 50365167
GI number: 50365167
Start: 407358
End: 408455
Strand: Reverse
Name: yqeH [H]
Synonym: Mfl351
Alternate gene names: 50365167
Gene position: 408455-407358 (Counterclockwise)
Preceding gene: 50365168
Following gene: 50365166
Centisome position: 51.49
GC content: 22.59
Gene sequence:
>1098_bases ATGAGCAAGTGTATAGGTTGTGGAATTTTAAAACAAAATAAAGATCAAAATAAACCTGGTTATGTCATTAAACCAGAAAA TGAATATTGTTTAAGATGTTTTAAAATTAAAAACTATAATGAATTAATTAATCAAGAAATAAATGCTGAGCAATTTATTT TAAAATTAAAAACTTTAATTCAAAATGATAAACCAAAAGATATAGAATTCTTTTATATAATCGATATTTTTGATTTAGAA GGAAGTAGAGTTAAAGAAATTGAAGAAGCTATTAAAAGATACCCAGTTACAATTGTAGTTAATAAAATAGATTTACTCCC TAAAGCTGTAAAACTAGCAAAAATAAGAAGATATATAACTGATCTATTTGCAAAAAGTGCTATATACGATGCAAATATTA TTTTAAACACAAGTTTTAAAAATAATTTTACAAATAGTTTGTTAAATAAAATTAAGAAAACTAAAACTAAAAAATATTTC ATTGGGAGCTCTAATGTTGGTAAATCTTCAATTATTAATTCACTTTTAAGAACTAATAACTTAATACCTCAAATAGTTGA ATCTAAATACTTTAATACAACATTAGACTTCATTCAAATTAAATTATCAAGTGATGATATTATATTTGATACACCAGGAA TCGCTAGAAGCAATTCTGCAGCTAATTTATTAGATAAAGAAGATTGAAAATATATTTACTTCAATAAAGAAGTTGCACAA AATACTTTTCAATTAAAGCCATTTAATTCAATCTTTTATGCAGGTATTGCTTGAGTTGATTTTGAATGAGAAAGTGATGA AATTAACAGTTTTCATTTCTTCAATAACAAAGAAATCAAATTACATAGAACTAATACAAAAAACGCATTTGATTATTACA CAAGAAATAAAGAAAATATTGTTCCATATAATTTAGACAATAACTTTGTTAAAAGAGAGTTTATATTTAATGAAAAAGAT ATAAACAAAGAATTTGAAATATCTATTTCAGGGTTAGGTTGATTTAACTTTAAAGTTAAAAATCCAATGAAAGTAACAAT AAATATTCCTACAAGTAATGTTGAAGTTGAAACAACATTAAGAAAACCATTAGTTTAG
Upstream 100 bases:
>100_bases GTTTAAAAGAAGCTAGATCACATTGTTATGATGATGTATTAAAAATATTAGTTTTAATAAAGTTCTTAAGTTATATTATG AACAAACAAATGGGGGAAAC
Downstream 100 bases:
>100_bases TATAAAATAAGTTTAAAGGGGTATTAAAATGAGTCAATCAAAAGAAATGTCAATGCCAGAAGTTATTCAAGAAATAAATC GTTTGGCAAAAATCAAAAAG
Product: GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSKCIGCGILKQNKDQNKPGYVIKPENEYCLRCFKIKNYNELINQEINAEQFILKLKTLIQNDKPKDIEFFYIIDIFDLE GSRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYITDLFAKSAIYDANIILNTSFKNNFTNSLLNKIKKTKTKKYF IGSSNVGKSSIINSLLRTNNLIPQIVESKYFNTTLDFIQIKLSSDDIIFDTPGIARSNSAANLLDKEDWKYIYFNKEVAQ NTFQLKPFNSIFYAGIAWVDFEWESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRNKENIVPYNLDNNFVKREFIFNEKD INKEFEISISGLGWFNFKVKNPMKVTINIPTSNVEVETTLRKPLV
Sequences:
>Translated_365_residues MSKCIGCGILKQNKDQNKPGYVIKPENEYCLRCFKIKNYNELINQEINAEQFILKLKTLIQNDKPKDIEFFYIIDIFDLE GSRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYITDLFAKSAIYDANIILNTSFKNNFTNSLLNKIKKTKTKKYF IGSSNVGKSSIINSLLRTNNLIPQIVESKYFNTTLDFIQIKLSSDDIIFDTPGIARSNSAANLLDKED*KYIYFNKEVAQ NTFQLKPFNSIFYAGIA*VDFE*ESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRNKENIVPYNLDNNFVKREFIFNEKD INKEFEISISGLG*FNFKVKNPMKVTINIPTSNVEVETTLRKPLV >Mature_364_residues SKCIGCGILKQNKDQNKPGYVIKPENEYCLRCFKIKNYNELINQEINAEQFILKLKTLIQNDKPKDIEFFYIIDIFDLEG SRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYITDLFAKSAIYDANIILNTSFKNNFTNSLLNKIKKTKTKKYFI GSSNVGKSSIINSLLRTNNLIPQIVESKYFNTTLDFIQIKLSSDDIIFDTPGIARSNSAANLLDKED*KYIYFNKEVAQN TFQLKPFNSIFYAGIA*VDFE*ESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRNKENIVPYNLDNNFVKREFIFNEKDI NKEFEISISGLG*FNFKVKNPMKVTINIPTSNVEVETTLRKPLV
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019988 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41864; Mature: 41732
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCIGCGILKQNKDQNKPGYVIKPENEYCLRCFKIKNYNELINQEINAEQFILKLKTLI CCCCEECCCCCCCCCCCCCCEEECCCCHHEEEEEEECCHHHHHCCCCCHHHHHHHHHHHH QNDKPKDIEFFYIIDIFDLEGSRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYIT CCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH DLFAKSAIYDANIILNTSFKNNFTNSLLNKIKKTKTKKYFIGSSNVGKSSIINSLLRTNN HHHHHHHEEECEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCC LIPQIVESKYFNTTLDFIQIKLSSDDIIFDTPGIARSNSAANLLDKEDKYIYFNKEVAQN CCHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCHHHCCCCCCEEEEEHHHHCC TFQLKPFNSIFYAGIAVDFEESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRNKENIVPY EEEECCCCCEEEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCHHHHCCCCCCEEEE NLDNNFVKREFIFNEKDINKEFEISISGLGFNFKVKNPMKVTINIPTSNVEVETTLRKPL CCCCCEEEHEEEECCCCCCCEEEEEEEECEEEEEECCCEEEEEECCCCCEEEEEHHCCCC V C >Mature Secondary Structure SKCIGCGILKQNKDQNKPGYVIKPENEYCLRCFKIKNYNELINQEINAEQFILKLKTLI CCCEECCCCCCCCCCCCCCEEECCCCHHEEEEEEECCHHHHHCCCCCHHHHHHHHHHHH QNDKPKDIEFFYIIDIFDLEGSRVKEIEEAIKRYPVTIVVNKIDLLPKAVKLAKIRRYIT CCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH DLFAKSAIYDANIILNTSFKNNFTNSLLNKIKKTKTKKYFIGSSNVGKSSIINSLLRTNN HHHHHHHEEECEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCC LIPQIVESKYFNTTLDFIQIKLSSDDIIFDTPGIARSNSAANLLDKEDKYIYFNKEVAQN CCHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCCCCCHHHCCCCCCEEEEEHHHHCC TFQLKPFNSIFYAGIAVDFEESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRNKENIVPY EEEECCCCCEEEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCCCHHHHCCCCCCEEEE NLDNNFVKREFIFNEKDINKEFEISISGLGFNFKVKNPMKVTINIPTSNVEVETTLRKPL CCCCCEEEHEEEECCCCCCCEEEEEEEECEEEEEECCCEEEEEECCCCCEEEEEHHCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]