Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is tdk [H]
Identifier: 49188165
GI number: 49188165
Start: 5059109
End: 5059693
Strand: Reverse
Name: tdk [H]
Synonym: BAS5179
Alternate gene names: 49188165
Gene position: 5059693-5059109 (Counterclockwise)
Preceding gene: 49188166
Following gene: 49188164
Centisome position: 96.77
GC content: 39.32
Gene sequence:
>585_bases ATGTACTTAATAAATCAGAACGGTTGGATTGAAGTGATTTGCGGTAGTATGTTTTCTGGTAAATCAGAAGAGCTTATCCG CCGTGTTCGTCGTACGCAATTTGCGAAACAACATGCAATTGTATTTAAACCATGTATTGATAATCGCTATAGTGAAGAAG ACGTTGTATCACATAACGGATTAAAGGTAAAAGCAGTTCCTGTTTCAGCTTCAAAAGATATATTTAAACATATCACTGAA GAAATGGATGTAATTGCAATTGATGAAGTGCAATTCTTTGATGGGGACATTGTGGAAGTGGTGCAAGTATTGGCAAATCG TGGCTATCGTGTCATTGTAGCTGGTTTAGACCAAGATTTCCGTGGTCTACCATTTGGACAAGTTCCTCAGCTGATGGCGA TTGCTGAACATGTAACAAAACTACAAGCTGTATGTTCTGCATGTGGATCTCCGGCAAGTCGTACACAACGATTAATTGAT GGAGAACCAGCGGCATTTGATGATCCAATTATTTTAGTTGGTGCTTCAGAGTCGTATGAACCACGCTGTCGTCATTGTCA TGCAGTTCCTACAAAACAAAGATAA
Upstream 100 bases:
>100_bases TAAAACAGGCAAGTGTATCTATTCGCTTGTCTGTTTTTTTTGCGAAAATATTATACCTTTACCCTACTTTTAACGAAAAA GTAGATGAAAGGAGAGCTTC
Downstream 100 bases:
>100_bases GTAAACTCGCTGTGCAAGGCGGGTTTTTTTCAGAATAGAGAGTGTGAGTGGTGTGAGCCGCTTACGCTTTTAAATAATAT CTAGTTCCGGTGGCTAGCTC
Product: thymidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITE EMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLID GEPAAFDDPIILVGASESYEPRCRHCHAVPTKQR
Sequences:
>Translated_194_residues MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITE EMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLID GEPAAFDDPIILVGASESYEPRCRHCHAVPTKQR >Mature_194_residues MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITE EMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLID GEPAAFDDPIILVGASESYEPRCRHCHAVPTKQR
Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]
COG id: COG1435
COG function: function code F; Thymidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine kinase family [H]
Homologues:
Organism=Homo sapiens, GI164698438, Length=180, Percent_Identity=41.1111111111111, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17543396, Length=193, Percent_Identity=33.6787564766839, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001267 - InterPro: IPR020633 - InterPro: IPR020634 [H]
Pfam domain/function: PF00265 TK [H]
EC number: =2.7.1.21 [H]
Molecular weight: Translated: 21642; Mature: 21642
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00603 TK_CELLULAR_TYPE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNG CEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCC LKVKAVPVSASKDIFKHITEEMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDF EEEEEEECCCHHHHHHHHHHHCCEEEECCEEECCCCHHHHHHHHHCCCCEEEEEECCCCC RGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCC PRCRHCHAVPTKQR CHHHHCCCCCCCCC >Mature Secondary Structure MYLINQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNG CEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCC LKVKAVPVSASKDIFKHITEEMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDF EEEEEEECCCHHHHHHHHHHHCCEEEECCEEECCCCHHHHHHHHHCCCCEEEEEECCCCC RGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCC PRCRHCHAVPTKQR CHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA