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The map label for this gene is rpmE2

Identifier: 49188166

GI number: 49188166

Start: 5059802

End: 5060047

Strand: Reverse

Name: rpmE2

Synonym: BAS5180

Alternate gene names: 49188166

Gene position: 5060047-5059802 (Counterclockwise)

Preceding gene: 49188167

Following gene: 49188165

Centisome position: 96.78

GC content: 40.24

Gene sequence:

>246_bases
ATGAAAGCAGGAATTCACCCAGATTACAAGAAAGTTGTATTCATGGACACAAACACAGGCTTCAAATTCTTAAGCGGATC
TACTAAAGGATCTAACGAAACTGTTGAGTGGGAAGATGGTAACACTTATCCATTACTAAAAGTTGAGATCAGTTCTGATT
CTCACCCATTCTACACTGGACGTCAGAAGTTTGCTACTGCAGACGGACGCGTTGACCGCTTCAATAAGAAATACGGTCTT
AAGTAA

Upstream 100 bases:

>100_bases
ATAATTTCATCATATGTGTTTCATCAATATAGTTGTGTATGCAGCTAAAGATGAAAAACTCTGTTTCGAAAATGATTCAG
GGCGGAAGGAGATGAAAAGA

Downstream 100 bases:

>100_bases
TAAAAACATAAAACAGGCAAGTGTATCTATTCGCTTGTCTGTTTTTTTTGCGAAAATATTATACCTTTACCCTACTTTTA
ACGAAAAAGTAGATGAAAGG

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKAGIHPDYKKVVFMDTNTGFKFLSGSTKGSNETVEWEDGNTYPLLKVEISSDSHPFYTGRQKFATADGRVDRFNKKYGL
K

Sequences:

>Translated_81_residues
MKAGIHPDYKKVVFMDTNTGFKFLSGSTKGSNETVEWEDGNTYPLLKVEISSDSHPFYTGRQKFATADGRVDRFNKKYGL
K
>Mature_81_residues
MKAGIHPDYKKVVFMDTNTGFKFLSGSTKGSNETVEWEDGNTYPLLKVEISSDSHPFYTGRQKFATADGRVDRFNKKYGL
K

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=44.3037974683544, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_BACAA (C3P293)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002869546.1
- ProteinModelPortal:   C3P293
- SMR:   C3P293
- EnsemblBacteria:   EBBACT00000128384
- GeneID:   7849423
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_5601
- GeneTree:   EBGT00050000002228
- ProtClustDB:   PRK01678
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9184; Mature: 9184

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGIHPDYKKVVFMDTNTGFKFLSGSTKGSNETVEWEDGNTYPLLKVEISSDSHPFYTG
CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
RQKFATADGRVDRFNKKYGLK
CCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAGIHPDYKKVVFMDTNTGFKFLSGSTKGSNETVEWEDGNTYPLLKVEISSDSHPFYTG
CCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
RQKFATADGRVDRFNKKYGLK
CCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA