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The map label for this gene is lytR

Identifier: 49188101

GI number: 49188101

Start: 4994582

End: 4995493

Strand: Reverse

Name: lytR

Synonym: BAS5115

Alternate gene names: 49188101

Gene position: 4995493-4994582 (Counterclockwise)

Preceding gene: 49188102

Following gene: 49188100

Centisome position: 95.54

GC content: 35.75

Gene sequence:

>912_bases
ATGAAAAAGAAAATTTTATTTTGGGTACTCGGTATCCTTGGGGTACTAATCATAGGTGGAGGAATTTATGCTTATAATGT
ATATTCTTCTGTATCTAATACATTAAAGGAAGTTCATCAACCTTTAAAACGTGATCAAAACAACAGTAATGTTGGAGAAA
AAGTGAGTAAGAGTGAACCAGTGTCAATTTTATTACTAGGAGCAGATGAGCGCGGTGAGGATAAAGGGCGTTCAGATTCT
TTAATGGTGATTACATTAAATCCTAAAAATAACTCTATGAAAACAGTAAGTATTCCTCGTGATACGTATACAGAAATTGT
TGGAAAAGGTAAAAGCGATAAAATCAATCATGCTTATGCATTCGGCGGAGTTGATATGTCTGTAGCGACAGTAGAAAACT
TCTTGAATGTTCCTATTAATTATTATATTGAAGTGAACATGGAGGGCTTTAAAGATATTGTTGATGCAGTTGGCGGTGTA
GATGTAAAGAATGATTTAGAATTTACGCAGGATGGACATCATTTTGCGAAAGGAAATATTCATTTAACAGGTGACCAAGC
TCTAGCATTCACACGTATGCGTAAACAAGACCCACGTGGTGACTTTGGTCGTCAGATGCGTCAACGTCAAGTGATGCAAG
GTGTTATCAAAAAGGGTGCAAGCTTCTCTTCTTTAACAGGTTATGGAGATGTATTATCAGCAATTCAAAAGAATGTGAAG
ACAAACTTAACGCAAGATCAAATGTTTGATATGCAAAAGAACTATAAAGATTGCTTGAAAAATAGTGAGGATATTCAAAT
CCCAGGTGACGGTCACAAGGCTGCTGATGGCATTTGGTATTACTATGTTCCAGATGCAGCAAAACAAGATTTAACGAATA
AATTAAGAACGCATCTTGAAGTGACTAAGTAA

Upstream 100 bases:

>100_bases
TTTTAATTTATCTTTTATTTTTAATCAAGAATAATGTAATATAGTGAGGAGTATAAAAATAGATATATTATTTTTAAATT
TTGATAAAGAGGGTAAAGGT

Downstream 100 bases:

>100_bases
TAAGTAATGATTCAACTTCTTTAGACAAAGTGCTAAAGGTCACGAAGTTTGGGCACAATATGTAACGGATTATTTCGTTG
CGAAGTAATAAAGGTACACA

Product: membrane-bound transcriptional regulator LytR

Products: NA

Alternate protein names: Membrane-bound protein lytR

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGEDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVENFLNVPINYYIEVNMEGFKDIVDAVGGV
DVKNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLSAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRTHLEVTK

Sequences:

>Translated_303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGEDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVENFLNVPINYYIEVNMEGFKDIVDAVGGV
DVKNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLSAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRTHLEVTK
>Mature_303_residues
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEPVSILLLGADERGEDKGRSDS
LMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYAFGGVDMSVATVENFLNVPINYYIEVNMEGFKDIVDAVGGV
DVKNDLEFTQDGHHFAKGNIHLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLSAIQKNVK
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRTHLEVTK

Specific function: Attenuator role for operon expression

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LYAT_BACAA (C3P1B4)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002869480.1
- EnsemblBacteria:   EBBACT00000130599
- GeneID:   7850909
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_5533
- GeneTree:   EBGT00070000031934
- ProtClustDB:   PRK09379
- GO:   GO:0006350
- HAMAP:   MF_01140
- InterPro:   IPR004474
- TIGRFAMs:   TIGR00350

Pfam domain/function: PF03816 LytR_cpsA_psr

EC number: NA

Molecular weight: Translated: 33760; Mature: 33760

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17dd255c)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEP
CCCHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC
VSILLLGADERGEDKGRSDSLMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEE
FGGVDMSVATVENFLNVPINYYIEVNMEGFKDIVDAVGGVDVKNDLEFTQDGHHFAKGNI
ECCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCE
HLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLSAIQKNVK
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRTHLE
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
VTK
CCH
>Mature Secondary Structure
MKKKILFWVLGILGVLIIGGGIYAYNVYSSVSNTLKEVHQPLKRDQNNSNVGEKVSKSEP
CCCHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC
VSILLLGADERGEDKGRSDSLMVITLNPKNNSMKTVSIPRDTYTEIVGKGKSDKINHAYA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEE
FGGVDMSVATVENFLNVPINYYIEVNMEGFKDIVDAVGGVDVKNDLEFTQDGHHFAKGNI
ECCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCE
HLTGDQALAFTRMRKQDPRGDFGRQMRQRQVMQGVIKKGASFSSLTGYGDVLSAIQKNVK
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
TNLTQDQMFDMQKNYKDCLKNSEDIQIPGDGHKAADGIWYYYVPDAAKQDLTNKLRTHLE
CCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
VTK
CCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA