Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is hemH
Identifier: 46447191
GI number: 46447191
Start: 1865025
End: 1866068
Strand: Reverse
Name: hemH
Synonym: pc1557
Alternate gene names: 46447191
Gene position: 1866068-1865025 (Counterclockwise)
Preceding gene: 46447192
Following gene: 46447190
Centisome position: 77.29
GC content: 36.49
Gene sequence:
>1044_bases ATGAATCAAAGAACAGGAATTTTACTTGTTAACCTTGGAACACCTAAAACTCCTCGACCTAAAGATGTCTATCGTTATTT GAATGAATTTTTAACCGATGGGAGAGTAATTGATTTGCCCTGGCTAAAAAGACAGCTCTTAGTAAGATGCATTATTGTTC CTTTTAGATATAAACAATCAAGCATGCTCTACCAAAAACTATGGACAGCTGAAGGATCTCCTCTTCTTGTTCATGGAATA GCTGTTCAAACTAAACTGCAAATGATTTTAGGTGAATCATTTCAAGTTGAGTTGGCGATGCGTTATCAAAATCCCTCAAT TGAAGAAGGTTTAGAGCGCTTAAAATTAGCAAATGTAAAAGAAATTGTGATTTTTCCTTTATTTCCTCAATATGCGTCTG CCACAACAGGCTCTGTACATCAAGAAGTTATGAAACATTTACAGCAGTGGCAAAATATCCCAACACTGACATTTATCAAT AGTTACCCAGACCATCCTGGTTTAGTAGGAGCTTTCTGTGAAAGGGCAAAGCAATACGATTTAAGTATTTATGATTATTT TTTATTTAGCTTTCACGGATTACCGGAAAGGCAGATTCGAAAAGGAGATTCAACAGGTAAATGTTTAACAGAAAACTGTT GTCAAGTGATTTGCTCGGACAATGCATTTTGTTACAAAGCCCAGTGCTATAGAACAGCAAAAGCCATTGCTTCAAAACTT AGGATTAAACTCGAGCAATATACCGTTTGTTTTCAGTCTAGACTCGGAAAAGAGACATGGATTCAGCCTTATACAAGTGA TTTATTAAAAGATTGTCTCGCAAAAAATAGAAAAAAAATCCTTGTTTTTTGCCCTGCTTTTGTTTGTGATTGTCTTGAAA CCACGTGTGAAGTTTCTATCGAATATGCTGAAGAATTTAAACATTTGGGAGGGGATACTCTGCATCTAGTGGAGGGTCTA AACAGCCATCCCGTTTGGATAGAGGCTATAAAGACGATCATTCAAGAACATCTTCCTCACCCTCACAGTCAATTTTCTCG GTAA
Upstream 100 bases:
>100_bases ACATCCAAGTAGATGCTTCACTGATTCAACAAGTTTTTAATGAATCAGTAGCACTGTTGCCCGACACGCCTATTTTATAA ACTTGATAAATGAGAAAAAA
Downstream 100 bases:
>100_bases GATTTTGCCAAAATAGATTCAAATAAAAAAAGCTATTTATTGTAAGTTAAAATTTAATTGACCTCGAATGGAAAACGGGT TAAGGTCCGAAAGTGGACTA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNQRTGILLVNLGTPKTPRPKDVYRYLNEFLTDGRVIDLPWLKRQLLVRCIIVPFRYKQSSMLYQKLWTAEGSPLLVHGI AVQTKLQMILGESFQVELAMRYQNPSIEEGLERLKLANVKEIVIFPLFPQYASATTGSVHQEVMKHLQQWQNIPTLTFIN SYPDHPGLVGAFCERAKQYDLSIYDYFLFSFHGLPERQIRKGDSTGKCLTENCCQVICSDNAFCYKAQCYRTAKAIASKL RIKLEQYTVCFQSRLGKETWIQPYTSDLLKDCLAKNRKKILVFCPAFVCDCLETTCEVSIEYAEEFKHLGGDTLHLVEGL NSHPVWIEAIKTIIQEHLPHPHSQFSR
Sequences:
>Translated_347_residues MNQRTGILLVNLGTPKTPRPKDVYRYLNEFLTDGRVIDLPWLKRQLLVRCIIVPFRYKQSSMLYQKLWTAEGSPLLVHGI AVQTKLQMILGESFQVELAMRYQNPSIEEGLERLKLANVKEIVIFPLFPQYASATTGSVHQEVMKHLQQWQNIPTLTFIN SYPDHPGLVGAFCERAKQYDLSIYDYFLFSFHGLPERQIRKGDSTGKCLTENCCQVICSDNAFCYKAQCYRTAKAIASKL RIKLEQYTVCFQSRLGKETWIQPYTSDLLKDCLAKNRKKILVFCPAFVCDCLETTCEVSIEYAEEFKHLGGDTLHLVEGL NSHPVWIEAIKTIIQEHLPHPHSQFSR >Mature_347_residues MNQRTGILLVNLGTPKTPRPKDVYRYLNEFLTDGRVIDLPWLKRQLLVRCIIVPFRYKQSSMLYQKLWTAEGSPLLVHGI AVQTKLQMILGESFQVELAMRYQNPSIEEGLERLKLANVKEIVIFPLFPQYASATTGSVHQEVMKHLQQWQNIPTLTFIN SYPDHPGLVGAFCERAKQYDLSIYDYFLFSFHGLPERQIRKGDSTGKCLTENCCQVICSDNAFCYKAQCYRTAKAIASKL RIKLEQYTVCFQSRLGKETWIQPYTSDLLKDCLAKNRKKILVFCPAFVCDCLETTCEVSIEYAEEFKHLGGDTLHLVEGL NSHPVWIEAIKTIIQEHLPHPHSQFSR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=356, Percent_Identity=24.7191011235955, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI60499021, Length=356, Percent_Identity=24.7191011235955, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1786681, Length=336, Percent_Identity=35.1190476190476, Blast_Score=204, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6324750, Length=355, Percent_Identity=24.5070422535211, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI17864156, Length=357, Percent_Identity=25.4901960784314, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24651774, Length=288, Percent_Identity=24.6527777777778, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552018, Length=203, Percent_Identity=24.1379310344828, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_PARUW (Q6MAW8)
Other databases:
- EMBL: BX908798 - RefSeq: YP_008556.1 - ProteinModelPortal: Q6MAW8 - SMR: Q6MAW8 - STRING: Q6MAW8 - GeneID: 2781264 - GenomeReviews: BX908798_GR - KEGG: pcu:pc1557 - NMPDR: fig|264201.1.peg.1557 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: GLPERHL - PhylomeDB: Q6MAW8 - ProtClustDB: PRK00035 - BioCyc: CPRO264201:PC1557-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 39974; Mature: 39974
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRTGILLVNLGTPKTPRPKDVYRYLNEFLTDGRVIDLPWLKRQLLVRCIIVPFRYKQS CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHH SMLYQKLWTAEGSPLLVHGIAVQTKLQMILGESFQVELAMRYQNPSIEEGLERLKLANVK HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCC EIVIFPLFPQYASATTGSVHQEVMKHLQQWQNIPTLTFINSYPDHPGLVGAFCERAKQYD EEEEEECCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCC LSIYDYFLFSFHGLPERQIRKGDSTGKCLTENCCQVICSDNAFCYKAQCYRTAKAIASKL CHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH RIKLEQYTVCFQSRLGKETWIQPYTSDLLKDCLAKNRKKILVFCPAFVCDCLETTCEVSI HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH EYAEEFKHLGGDTLHLVEGLNSHPVWIEAIKTIIQEHLPHPHSQFSR HHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MNQRTGILLVNLGTPKTPRPKDVYRYLNEFLTDGRVIDLPWLKRQLLVRCIIVPFRYKQS CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHH SMLYQKLWTAEGSPLLVHGIAVQTKLQMILGESFQVELAMRYQNPSIEEGLERLKLANVK HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCC EIVIFPLFPQYASATTGSVHQEVMKHLQQWQNIPTLTFINSYPDHPGLVGAFCERAKQYD EEEEEECCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCC LSIYDYFLFSFHGLPERQIRKGDSTGKCLTENCCQVICSDNAFCYKAQCYRTAKAIASKL CHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH RIKLEQYTVCFQSRLGKETWIQPYTSDLLKDCLAKNRKKILVFCPAFVCDCLETTCEVSI HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHH EYAEEFKHLGGDTLHLVEGLNSHPVWIEAIKTIIQEHLPHPHSQFSR HHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA