| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is treY [H]
Identifier: 46447190
GI number: 46447190
Start: 1861968
End: 1864838
Strand: Reverse
Name: treY [H]
Synonym: pc1556
Alternate gene names: 46447190
Gene position: 1864838-1861968 (Counterclockwise)
Preceding gene: 46447191
Following gene: 46447186
Centisome position: 77.24
GC content: 32.88
Gene sequence:
>2871_bases ATGAACGATCTTTCTATCATCCCCTTAGTCACTTATCGTTTACAATTCAACCAACATTTCACATTTAATCAAGCAAGCAA ATTAATTCCTTATTTTAAAGATTTAGGAATTTCTCATCTTTATGCCTCTCCTATTAATAAATCGCAACCAGGCAGCCTTC ATGGGTATGACCTTATTGATATCACACAATTAAATCCGGATATTGGAACAAAGGAAGAATTTTTTCTTTTTACTGAATCT CTTCGAGAAATGAAAATGGGACTAATCGTCGATTTTGTTCCCAACCATATGTGCATTAATGAAGGAAATAAATGGTGGAA CGACGTATTGGAAAATGGGCTCAGTTCTCTTTATGCCGAATATTTTGATATTAATTGGACGCCTCTAAAACCAGAATTAA ATAATAAGGTTCTTTTGCCGATATTAGACAAGCAATACGGAAAAGTGATAGATGATCAAAATCTCAAAATTGCCTTTAAG CAAGGAGCCTTTTTTGTTCAGTACCACAAAAAATTTTATCCTTTAAATCCAAGTTCTTGGGTACTCATTCTTAATTTGCT TGTTGAACACTTAAAAAACAATTTAGAATGCAATCAATCTCAGTTATCCGAATTAGAAAGCATTGTAACAGCTCTCGCAT ATATGCCAAGTATTCTGGAAACAGATTTAGAAAAACGTAAGGAGCGTAGCCGAGAGAAAGAAGTGATAAAAAAAAGATTA GTTAAATTAATTCAGCACAATCCCACTATTCTAATTGATATTCACGAAGTTTTAAAAAAATTTAATGTGAGTGAAGATTG CCCTCCTAATTATGATAATCTCGAAAAATTGCTCAATGAGCAAGCATATCGGTTAAGTTATTGGCGCGTCACCAATGAGG AAATCAATTATCGTCGATTTTGTGATATTAATGAATTAGCAAGCATGTGTGTAGAAAATGAGAGTGTGTTTGACAAGATG CATTCTTGGATTTTTAATATGATCAAACAAAATCATGTACAAGGCTTACGCATCGATCATGTAGATGGTTTATTTGATCC TGAACAATATTTCATGCGTTTGCAAGGCAAATATAAACAATTGCTTGGAAATTACGATTTACATGAGCAAAAAGCTTTTT ATGTCGTTATCGAGAAGATTTTAATTGGGAATGAAAAACTTCGTTCTCACTGGCTTGTTCATGGAACAACAGGTTATGAT TTTTTAAATTTAGTCAATGGCGTATTTGTTTTTACTCAGCATAGTGAAGACTTTTATCAAATTTATAGAAATTTTACAGG CTCTTTCCAAGAAATCGAGGAAATCATTTATCAAGCTAAAAAATTGATATTGTCCAATTTTTTATCCAGTGAACTACAAA TGCTCTCCCGGTGTTTAGAAATAATTGCCGAACAACATCGTTGGTCTAGAGATTATACATTTGAAAGTTTAAGGTCCGCG CTAATTGATATTGTCGCGTGTTTTCCCGTTTATCGTAGTTATATTCGCTTTTCTGATGAAATAATCAATCCAGAAGATAA AGTTTTAATCAACGAAGCAATTAAATTAGCAAAAAAAGTTAATCCAGCAAGCGATTTATCTGTTTTGAATTTCGTTCAAG ATGTTCTTCTATTTGAAAATCCGCCTGGTTTAAATCAAAAGCAAATTGATGATCGAAAATATTTTATTATGCGTTTTCAG CAATTATCCGCGCCTATTGCAGCAAAGGGGATAGAGGATACTTTTTTTTATCGTTTCTATCCTTTAAGTTCGTTAAATGA AGTGGGAATGAAACCCGGCCAATTTGGTATTGATGTCAGCCATTTTCATCGCATCAATCAAATGAGACTACAAAATTGGC CTCATAGTTTATTGACAACCTTCACTCATGATACTAAACGAAGTGAAGATGTTCGAGCGAGGATTAACGTATTATCAGAA GATCCTCAAGAGTGGAATTTAATGTTGAACCGTTGGCATAAATTTAACCATCTCTCGCAAAGCGAACTACATCAAAAAGA GTTAGATCGCAATGAGGAATATCTTTTATATCAAACACTTATTGGAACTTGGCCTATTTATGAAATGGATGCTAATGCTT TGGTACATTATTGCCATCGGATAGAACTTTACATGATAAAAGCATTAAGAGAGGCTAAAATTCATACTAGTTGGATTAAC CATCAAGTCGATTATGAAAATAGCGTTAGAAATTTTATTCAAAGAATTTTGTCGCCAGATAGCCTATTTTTAATAGATTT TAAAGCGTGGATTCCAAAAATTATCAAAGCTGGATTGTTTAATTCAATCTCCCAATTAATTTTGAAAATAACAAGCCCTG GAATTCCTGATTTCTACCAGGGAAGCGAATTATGGGAGTTTTCATTAGTAGATCCGGATAATCGTCATTTGGTTGATTAT TCAAGTCGACCCCAGCTATTACAAATTATTAAACAAAGATCAAAAGAAGATTTACCTAAATTTATTCATCAATTGGTTCA AAATCCAGAAGATGGATTGATCAAATTGTACGTTACATCTGTTCTTCTAAATTTTCGTAATGGCTATTTCAAAATTTTTC AAGAAGGAGATTATCAACCAGTAGAAATTATAGGAAATAAATCTCAACACGTGATTGCTTTTACTCGTTCTATTTCTAAT ATGCAGCTTCTTGTCGTCGTAGGAAGATTTTTCAAAAATTTAACCGATATATCAACAATATTACCTATCAATCAAGTTTG GGATCAGACCTATTTATCGATTTCTTTACCAAATGGGGAGGCTTATCGAGATATACTGTCTGGACAAACTTTTGAATTTG AATCTTGTCAATCAATCAGTCTTTCGCAGTTGTTTTCCCATTTTCCTTTTGCCGTTCTTTTGAAAGAATAA
Upstream 100 bases:
>100_bases CCGAAAGTGGACTAAAAATTTTCTCCTATAAAAATAATAAACACATGCCAATTCCACTCATTCCAATTCCCTTACATTTT TAGAATTTTTAGAGGAAATT
Downstream 100 bases:
>100_bases ATATTCATAAACTTTTTATTTTTCAAAATAAAGCTGTTTGTAAGAAATCAATGTTTATAAAAAAAAGACCACACAAATAA AATTTTGTGTGGTCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 956; Mature: 956
Protein sequence:
>956_residues MNDLSIIPLVTYRLQFNQHFTFNQASKLIPYFKDLGISHLYASPINKSQPGSLHGYDLIDITQLNPDIGTKEEFFLFTES LREMKMGLIVDFVPNHMCINEGNKWWNDVLENGLSSLYAEYFDINWTPLKPELNNKVLLPILDKQYGKVIDDQNLKIAFK QGAFFVQYHKKFYPLNPSSWVLILNLLVEHLKNNLECNQSQLSELESIVTALAYMPSILETDLEKRKERSREKEVIKKRL VKLIQHNPTILIDIHEVLKKFNVSEDCPPNYDNLEKLLNEQAYRLSYWRVTNEEINYRRFCDINELASMCVENESVFDKM HSWIFNMIKQNHVQGLRIDHVDGLFDPEQYFMRLQGKYKQLLGNYDLHEQKAFYVVIEKILIGNEKLRSHWLVHGTTGYD FLNLVNGVFVFTQHSEDFYQIYRNFTGSFQEIEEIIYQAKKLILSNFLSSELQMLSRCLEIIAEQHRWSRDYTFESLRSA LIDIVACFPVYRSYIRFSDEIINPEDKVLINEAIKLAKKVNPASDLSVLNFVQDVLLFENPPGLNQKQIDDRKYFIMRFQ QLSAPIAAKGIEDTFFYRFYPLSSLNEVGMKPGQFGIDVSHFHRINQMRLQNWPHSLLTTFTHDTKRSEDVRARINVLSE DPQEWNLMLNRWHKFNHLSQSELHQKELDRNEEYLLYQTLIGTWPIYEMDANALVHYCHRIELYMIKALREAKIHTSWIN HQVDYENSVRNFIQRILSPDSLFLIDFKAWIPKIIKAGLFNSISQLILKITSPGIPDFYQGSELWEFSLVDPDNRHLVDY SSRPQLLQIIKQRSKEDLPKFIHQLVQNPEDGLIKLYVTSVLLNFRNGYFKIFQEGDYQPVEIIGNKSQHVIAFTRSISN MQLLVVVGRFFKNLTDISTILPINQVWDQTYLSISLPNGEAYRDILSGQTFEFESCQSISLSQLFSHFPFAVLLKE
Sequences:
>Translated_956_residues MNDLSIIPLVTYRLQFNQHFTFNQASKLIPYFKDLGISHLYASPINKSQPGSLHGYDLIDITQLNPDIGTKEEFFLFTES LREMKMGLIVDFVPNHMCINEGNKWWNDVLENGLSSLYAEYFDINWTPLKPELNNKVLLPILDKQYGKVIDDQNLKIAFK QGAFFVQYHKKFYPLNPSSWVLILNLLVEHLKNNLECNQSQLSELESIVTALAYMPSILETDLEKRKERSREKEVIKKRL VKLIQHNPTILIDIHEVLKKFNVSEDCPPNYDNLEKLLNEQAYRLSYWRVTNEEINYRRFCDINELASMCVENESVFDKM HSWIFNMIKQNHVQGLRIDHVDGLFDPEQYFMRLQGKYKQLLGNYDLHEQKAFYVVIEKILIGNEKLRSHWLVHGTTGYD FLNLVNGVFVFTQHSEDFYQIYRNFTGSFQEIEEIIYQAKKLILSNFLSSELQMLSRCLEIIAEQHRWSRDYTFESLRSA LIDIVACFPVYRSYIRFSDEIINPEDKVLINEAIKLAKKVNPASDLSVLNFVQDVLLFENPPGLNQKQIDDRKYFIMRFQ QLSAPIAAKGIEDTFFYRFYPLSSLNEVGMKPGQFGIDVSHFHRINQMRLQNWPHSLLTTFTHDTKRSEDVRARINVLSE DPQEWNLMLNRWHKFNHLSQSELHQKELDRNEEYLLYQTLIGTWPIYEMDANALVHYCHRIELYMIKALREAKIHTSWIN HQVDYENSVRNFIQRILSPDSLFLIDFKAWIPKIIKAGLFNSISQLILKITSPGIPDFYQGSELWEFSLVDPDNRHLVDY SSRPQLLQIIKQRSKEDLPKFIHQLVQNPEDGLIKLYVTSVLLNFRNGYFKIFQEGDYQPVEIIGNKSQHVIAFTRSISN MQLLVVVGRFFKNLTDISTILPINQVWDQTYLSISLPNGEAYRDILSGQTFEFESCQSISLSQLFSHFPFAVLLKE >Mature_956_residues MNDLSIIPLVTYRLQFNQHFTFNQASKLIPYFKDLGISHLYASPINKSQPGSLHGYDLIDITQLNPDIGTKEEFFLFTES LREMKMGLIVDFVPNHMCINEGNKWWNDVLENGLSSLYAEYFDINWTPLKPELNNKVLLPILDKQYGKVIDDQNLKIAFK QGAFFVQYHKKFYPLNPSSWVLILNLLVEHLKNNLECNQSQLSELESIVTALAYMPSILETDLEKRKERSREKEVIKKRL VKLIQHNPTILIDIHEVLKKFNVSEDCPPNYDNLEKLLNEQAYRLSYWRVTNEEINYRRFCDINELASMCVENESVFDKM HSWIFNMIKQNHVQGLRIDHVDGLFDPEQYFMRLQGKYKQLLGNYDLHEQKAFYVVIEKILIGNEKLRSHWLVHGTTGYD FLNLVNGVFVFTQHSEDFYQIYRNFTGSFQEIEEIIYQAKKLILSNFLSSELQMLSRCLEIIAEQHRWSRDYTFESLRSA LIDIVACFPVYRSYIRFSDEIINPEDKVLINEAIKLAKKVNPASDLSVLNFVQDVLLFENPPGLNQKQIDDRKYFIMRFQ QLSAPIAAKGIEDTFFYRFYPLSSLNEVGMKPGQFGIDVSHFHRINQMRLQNWPHSLLTTFTHDTKRSEDVRARINVLSE DPQEWNLMLNRWHKFNHLSQSELHQKELDRNEEYLLYQTLIGTWPIYEMDANALVHYCHRIELYMIKALREAKIHTSWIN HQVDYENSVRNFIQRILSPDSLFLIDFKAWIPKIIKAGLFNSISQLILKITSPGIPDFYQGSELWEFSLVDPDNRHLVDY SSRPQLLQIIKQRSKEDLPKFIHQLVQNPEDGLIKLYVTSVLLNFRNGYFKIFQEGDYQPVEIIGNKSQHVIAFTRSISN MQLLVVVGRFFKNLTDISTILPINQVWDQTYLSISLPNGEAYRDILSGQTFEFESCQSISLSQLFSHFPFAVLLKE
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 112368; Mature: 112368
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLSIIPLVTYRLQFNQHFTFNQASKLIPYFKDLGISHLYASPINKSQPGSLHGYDLID CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEE ITQLNPDIGTKEEFFLFTESLREMKMGLIVDFVPNHMCINEGNKWWNDVLENGLSSLYAE EEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHHHHHHHHHHHH YFDINWTPLKPELNNKVLLPILDKQYGKVIDDQNLKIAFKQGAFFVQYHKKFYPLNPSSW HHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCEEEEECCCEEEEEHHHCCCCCCCHH VLILNLLVEHLKNNLECNQSQLSELESIVTALAYMPSILETDLEKRKERSREKEVIKKRL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLIQHNPTILIDIHEVLKKFNVSEDCPPNYDNLEKLLNEQAYRLSYWRVTNEEINYRRF HHHHHCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHC CDINELASMCVENESVFDKMHSWIFNMIKQNHVQGLRIDHVDGLFDPEQYFMRLQGKYKQ CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH LLGNYDLHEQKAFYVVIEKILIGNEKLRSHWLVHGTTGYDFLNLVNGVFVFTQHSEDFYQ HHCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHCCEEEEEECCHHHHH IYRNFTGSFQEIEEIIYQAKKLILSNFLSSELQMLSRCLEIIAEQHRWSRDYTFESLRSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LIDIVACFPVYRSYIRFSDEIINPEDKVLINEAIKLAKKVNPASDLSVLNFVQDVLLFEN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC PPGLNQKQIDDRKYFIMRFQQLSAPIAAKGIEDTFFYRFYPLSSLNEVGMKPGQFGIDVS CCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHH HFHRINQMRLQNWPHSLLTTFTHDTKRSEDVRARINVLSEDPQEWNLMLNRWHKFNHLSQ HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH SELHQKELDRNEEYLLYQTLIGTWPIYEMDANALVHYCHRIELYMIKALREAKIHTSWIN HHHHHHHCCCCCCEEHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HQVDYENSVRNFIQRILSPDSLFLIDFKAWIPKIIKAGLFNSISQLILKITSPGIPDFYQ CCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSELWEFSLVDPDNRHLVDYSSRPQLLQIIKQRSKEDLPKFIHQLVQNPEDGLIKLYVTS CCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHH VLLNFRNGYFKIFQEGDYQPVEIIGNKSQHVIAFTRSISNMQLLVVVGRFFKNLTDISTI HHHHHCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LPINQVWDQTYLSISLPNGEAYRDILSGQTFEFESCQSISLSQLFSHFPFAVLLKE CCHHHHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECC >Mature Secondary Structure MNDLSIIPLVTYRLQFNQHFTFNQASKLIPYFKDLGISHLYASPINKSQPGSLHGYDLID CCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEE ITQLNPDIGTKEEFFLFTESLREMKMGLIVDFVPNHMCINEGNKWWNDVLENGLSSLYAE EEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCHHHHHHHHHHHHHHHHH YFDINWTPLKPELNNKVLLPILDKQYGKVIDDQNLKIAFKQGAFFVQYHKKFYPLNPSSW HHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCEEEEECCCEEEEEHHHCCCCCCCHH VLILNLLVEHLKNNLECNQSQLSELESIVTALAYMPSILETDLEKRKERSREKEVIKKRL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLIQHNPTILIDIHEVLKKFNVSEDCPPNYDNLEKLLNEQAYRLSYWRVTNEEINYRRF HHHHHCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHC CDINELASMCVENESVFDKMHSWIFNMIKQNHVQGLRIDHVDGLFDPEQYFMRLQGKYKQ CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH LLGNYDLHEQKAFYVVIEKILIGNEKLRSHWLVHGTTGYDFLNLVNGVFVFTQHSEDFYQ HHCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEECCCCHHHHHHHCCEEEEEECCHHHHH IYRNFTGSFQEIEEIIYQAKKLILSNFLSSELQMLSRCLEIIAEQHRWSRDYTFESLRSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LIDIVACFPVYRSYIRFSDEIINPEDKVLINEAIKLAKKVNPASDLSVLNFVQDVLLFEN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC PPGLNQKQIDDRKYFIMRFQQLSAPIAAKGIEDTFFYRFYPLSSLNEVGMKPGQFGIDVS CCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCHH HFHRINQMRLQNWPHSLLTTFTHDTKRSEDVRARINVLSEDPQEWNLMLNRWHKFNHLSQ HHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH SELHQKELDRNEEYLLYQTLIGTWPIYEMDANALVHYCHRIELYMIKALREAKIHTSWIN HHHHHHHCCCCCCEEHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HQVDYENSVRNFIQRILSPDSLFLIDFKAWIPKIIKAGLFNSISQLILKITSPGIPDFYQ CCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSELWEFSLVDPDNRHLVDYSSRPQLLQIIKQRSKEDLPKFIHQLVQNPEDGLIKLYVTS CCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHH VLLNFRNGYFKIFQEGDYQPVEIIGNKSQHVIAFTRSISNMQLLVVVGRFFKNLTDISTI HHHHHCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LPINQVWDQTYLSISLPNGEAYRDILSGQTFEFESCQSISLSQLFSHFPFAVLLKE CCHHHHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]