Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is hvsT1 [H]
Identifier: 46447112
GI number: 46447112
Start: 1753302
End: 1755224
Strand: Reverse
Name: hvsT1 [H]
Synonym: pc1478
Alternate gene names: 46447112
Gene position: 1755224-1753302 (Counterclockwise)
Preceding gene: 46447118
Following gene: 46447101
Centisome position: 72.7
GC content: 36.25
Gene sequence:
>1923_bases ATGTCACACTCTCATCATGACGAAGTATCTCTGATTGCTTTCCAGAAAGATTTTGAAAAATATTCTTGGAGTGCATTTCG CTTAGATTTACTGTCGGGCTTATCTGTTTCTATGCTAACAGTTCCTCAAGTAATGGCTTACGCCCTTGTAGCTGGTTTAC CAGTTTCGTGTGGTATTTTGGCTTCTGTTTTTTCTGCTATAGTGGTAGCTATTTTCTGTTCTTCTCGCCATTTGATCGTT GGTCCTAGCAATGCAATCGCTATTCTAATTCAAGCATGTATTTCAGAAATTTTATTTACCTATTATCGAGATATTTCTGG TCCTGAAAAAGAGCAGCTTATTTTGCAAATTTTATCCCAACTTATGTTGTTAGTAGGAGCAATTCAAATTTTAGCTGCAT TTTTTAAATTGGGAAGGTTGACGCACTTTGTCAGTCATACGGTGATTATTGGTTATATCTCTGGAGTTGCTCTTGCCCTG GTGATTAACCAAATTTTTCCCTTACTTGGTATGCCTGTCCCTCGTCATCTTTCTTCTCTCTATGAAATGAGTGTTTATAT TTTAACGCATTTGACAACGATCAATTGGCCGACAGCTTTAATTGGTGTTACGTGTTTGAGTTTGTTGCTCATATTAAGAA GAATTGATCGAAAGCTTCCTTCTGGTGCCATTGTTTTAGCTATAGTAGCTCTTGTCGCTTATTTTTTTGGCTATATTTAC AATTATTTTATTGTTAATGAATACCAATTTTTCAATTGGGAATATATTGGAAAAATAATGGAACCTATCGCCCTTGTTGG AGAAACAAACGGTGAGGGTTTAATTCCCAATTGGGGTTTGCCTTATTTTAATACAGGAATTATGAATAACTTACTTCCTG TCGCTTTTGCTATTGCTCTTTTAAGTGTCATGGAAGCAACAACAGCTTCTAAGTCCATCGCCGTAAAGTCGGGTCAGCAT CTCTCTACAAATCAAGAAATTTTTGGAGTGGGCTTAGGAAACTTTTTTGGTGCTTTTATTGGAGCGATGCCTGTATCAGG AAGTGCGGCTAGGAGTTCATTAAATTTTGAAAATGGTGCTAAAACGCGTTTAGCAGCAATAGTAAGCTCTCTAACTGTTG CTTTAATTTTATTTGCTTTTGGTTTTCTCATTAGACACATTCCTGTTGCTGCTTTTGCAGCACTTCTGGTTGCATCAGCT AGTAATATCGTGAATTTAAAACAATTATTTGTCTGTTTGAAAGCTACGCGATCAGATGCTTTTGTTTTGATTTTAACCAT ATTGTCTTGCATCTTTTTTAGACTAGATATTGCTTTTTACATAGGTGTTATCATGTCTATTTCGCTTTACTTAAAAAAAG CAGCGATTCCTCAGCTTGTTGAATTTACAGTAGATAATGAAGGAGTCTTGCATACAATCGATCACCATCACTTACAAGAA CCTCGAAGTATTCGTTTTATTAAGGTTGAAGGGGAGCTGTTTTTTGGCTCAGCAGATTTATTTCAGGCCGCATTAAAGTC AATTACAGAAGATGATACAACAACAAGAGTCCTCATTTTACAGCTCAAAAATGCGCGTGATATTGATGCGACAACTTGTT TAGCATTGCAACAACTTCATCATTATTTGAAATCTTCAGGAAGGCACCTTATTGGCTGTGGATTAACCCACCAAATTTGG GATGTTTTGAGTGATTCAGGAATCATTGATATTGTCGGAAAAAGCAATTTATTTATTTTTGACGAAAAACATCCTCAATT ATCTGTTCAAAAAGCTTTTATACGAGCACATGAACTTTTATCCATCGATACAGCAAATATTTCAGAAATTGTCCCTCCTA TTACTGCGATGCCTATGCCCGAAGCTATTTCTGATTCTCAAGTCATAGATCCTTCTTCAGTTATTTCACCAGTAGCTAAC TAA
Upstream 100 bases:
>100_bases ATTATATTTTTTTCAAAAAGCCTAGACAGCGTTAAGAAAAATTTAAATTTTTTAATAGATTAGAATAAAGTTATTTTCAT AAAAAATTACCTATTTAATT
Downstream 100 bases:
>100_bases TCCATTTATATTGTTTGCGTTTTTTTAATAGCCAGGGGAAGCGCGTTAAAGTTTCGGTAAAATTTTTTACTGAAATTAAA TTCTACTAGGTTTTTTTTAA
Product: putative sulfate transport protein
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MSHSHHDEVSLIAFQKDFEKYSWSAFRLDLLSGLSVSMLTVPQVMAYALVAGLPVSCGILASVFSAIVVAIFCSSRHLIV GPSNAIAILIQACISEILFTYYRDISGPEKEQLILQILSQLMLLVGAIQILAAFFKLGRLTHFVSHTVIIGYISGVALAL VINQIFPLLGMPVPRHLSSLYEMSVYILTHLTTINWPTALIGVTCLSLLLILRRIDRKLPSGAIVLAIVALVAYFFGYIY NYFIVNEYQFFNWEYIGKIMEPIALVGETNGEGLIPNWGLPYFNTGIMNNLLPVAFAIALLSVMEATTASKSIAVKSGQH LSTNQEIFGVGLGNFFGAFIGAMPVSGSAARSSLNFENGAKTRLAAIVSSLTVALILFAFGFLIRHIPVAAFAALLVASA SNIVNLKQLFVCLKATRSDAFVLILTILSCIFFRLDIAFYIGVIMSISLYLKKAAIPQLVEFTVDNEGVLHTIDHHHLQE PRSIRFIKVEGELFFGSADLFQAALKSITEDDTTTRVLILQLKNARDIDATTCLALQQLHHYLKSSGRHLIGCGLTHQIW DVLSDSGIIDIVGKSNLFIFDEKHPQLSVQKAFIRAHELLSIDTANISEIVPPITAMPMPEAISDSQVIDPSSVISPVAN
Sequences:
>Translated_640_residues MSHSHHDEVSLIAFQKDFEKYSWSAFRLDLLSGLSVSMLTVPQVMAYALVAGLPVSCGILASVFSAIVVAIFCSSRHLIV GPSNAIAILIQACISEILFTYYRDISGPEKEQLILQILSQLMLLVGAIQILAAFFKLGRLTHFVSHTVIIGYISGVALAL VINQIFPLLGMPVPRHLSSLYEMSVYILTHLTTINWPTALIGVTCLSLLLILRRIDRKLPSGAIVLAIVALVAYFFGYIY NYFIVNEYQFFNWEYIGKIMEPIALVGETNGEGLIPNWGLPYFNTGIMNNLLPVAFAIALLSVMEATTASKSIAVKSGQH LSTNQEIFGVGLGNFFGAFIGAMPVSGSAARSSLNFENGAKTRLAAIVSSLTVALILFAFGFLIRHIPVAAFAALLVASA SNIVNLKQLFVCLKATRSDAFVLILTILSCIFFRLDIAFYIGVIMSISLYLKKAAIPQLVEFTVDNEGVLHTIDHHHLQE PRSIRFIKVEGELFFGSADLFQAALKSITEDDTTTRVLILQLKNARDIDATTCLALQQLHHYLKSSGRHLIGCGLTHQIW DVLSDSGIIDIVGKSNLFIFDEKHPQLSVQKAFIRAHELLSIDTANISEIVPPITAMPMPEAISDSQVIDPSSVISPVAN >Mature_639_residues SHSHHDEVSLIAFQKDFEKYSWSAFRLDLLSGLSVSMLTVPQVMAYALVAGLPVSCGILASVFSAIVVAIFCSSRHLIVG PSNAIAILIQACISEILFTYYRDISGPEKEQLILQILSQLMLLVGAIQILAAFFKLGRLTHFVSHTVIIGYISGVALALV INQIFPLLGMPVPRHLSSLYEMSVYILTHLTTINWPTALIGVTCLSLLLILRRIDRKLPSGAIVLAIVALVAYFFGYIYN YFIVNEYQFFNWEYIGKIMEPIALVGETNGEGLIPNWGLPYFNTGIMNNLLPVAFAIALLSVMEATTASKSIAVKSGQHL STNQEIFGVGLGNFFGAFIGAMPVSGSAARSSLNFENGAKTRLAAIVSSLTVALILFAFGFLIRHIPVAAFAALLVASAS NIVNLKQLFVCLKATRSDAFVLILTILSCIFFRLDIAFYIGVIMSISLYLKKAAIPQLVEFTVDNEGVLHTIDHHHLQEP RSIRFIKVEGELFFGSADLFQAALKSITEDDTTTRVLILQLKNARDIDATTCLALQQLHHYLKSSGRHLIGCGLTHQIWD VLSDSGIIDIVGKSNLFIFDEKHPQLSVQKAFIRAHELLSIDTANISEIVPPITAMPMPEAISDSQVIDPSSVISPVAN
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI94721259, Length=489, Percent_Identity=23.721881390593, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI94721253, Length=489, Percent_Identity=23.721881390593, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI94721255, Length=489, Percent_Identity=23.721881390593, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI94721257, Length=489, Percent_Identity=23.721881390593, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI262206105, Length=571, Percent_Identity=25.3940455341506, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI262206075, Length=571, Percent_Identity=25.3940455341506, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI262206069, Length=571, Percent_Identity=25.3940455341506, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI262206063, Length=571, Percent_Identity=25.3940455341506, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI39752683, Length=518, Percent_Identity=23.5521235521236, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI45827800, Length=518, Percent_Identity=23.5521235521236, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI4505697, Length=531, Percent_Identity=22.9755178907721, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI4557535, Length=521, Percent_Identity=22.2648752399232, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI45827802, Length=459, Percent_Identity=23.9651416122004, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI269784651, Length=511, Percent_Identity=22.3091976516634, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI20336282, Length=506, Percent_Identity=21.5415019762846, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI16306483, Length=506, Percent_Identity=21.5415019762846, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI100913030, Length=515, Percent_Identity=21.3592233009709, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI16418413, Length=542, Percent_Identity=21.2177121771218, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI47131207, Length=526, Percent_Identity=22.4334600760456, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI20336272, Length=526, Percent_Identity=22.4334600760456, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI217272867, Length=542, Percent_Identity=21.2177121771218, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI65506789, Length=384, Percent_Identity=25.5208333333333, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI87081859, Length=580, Percent_Identity=25.8620689655172, Blast_Score=133, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17566848, Length=591, Percent_Identity=24.5346869712352, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17551690, Length=642, Percent_Identity=22.4299065420561, Blast_Score=129, Evalue=7e-30, Organism=Caenorhabditis elegans, GI86565215, Length=439, Percent_Identity=24.6013667425968, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193203292, Length=527, Percent_Identity=23.5294117647059, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI86564196, Length=512, Percent_Identity=22.4609375, Blast_Score=105, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17562578, Length=541, Percent_Identity=22.550831792976, Blast_Score=96, Evalue=6e-20, Organism=Caenorhabditis elegans, GI86565213, Length=152, Percent_Identity=30.9210526315789, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI86564876, Length=578, Percent_Identity=19.0311418685121, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323121, Length=453, Percent_Identity=24.7240618101545, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6319771, Length=467, Percent_Identity=23.982869379015, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6325260, Length=461, Percent_Identity=22.5596529284165, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI85815873, Length=595, Percent_Identity=24.7058823529412, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI19922482, Length=569, Percent_Identity=24.4288224956063, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI24649801, Length=487, Percent_Identity=24.6406570841889, Blast_Score=128, Evalue=2e-29, Organism=Drosophila melanogaster, GI24647160, Length=458, Percent_Identity=24.235807860262, Blast_Score=107, Evalue=4e-23, Organism=Drosophila melanogaster, GI21355087, Length=458, Percent_Identity=24.4541484716157, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24663084, Length=566, Percent_Identity=23.1448763250883, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI21357695, Length=566, Percent_Identity=23.1448763250883, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24651449, Length=489, Percent_Identity=23.1083844580777, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI21358633, Length=500, Percent_Identity=23.4, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24666186, Length=641, Percent_Identity=21.6848673946958, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI21358229, Length=459, Percent_Identity=24.400871459695, Blast_Score=89, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 70013; Mature: 69882
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50801 STAS ; PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSHHDEVSLIAFQKDFEKYSWSAFRLDLLSGLSVSMLTVPQVMAYALVAGLPVSCGIL CCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ASVFSAIVVAIFCSSRHLIVGPSNAIAILIQACISEILFTYYRDISGPEKEQLILQILSQ HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LMLLVGAIQILAAFFKLGRLTHFVSHTVIIGYISGVALALVINQIFPLLGMPVPRHLSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YEMSVYILTHLTTINWPTALIGVTCLSLLLILRRIDRKLPSGAIVLAIVALVAYFFGYIY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NYFIVNEYQFFNWEYIGKIMEPIALVGETNGEGLIPNWGLPYFNTGIMNNLLPVAFAIAL HHHHEECEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSVMEATTASKSIAVKSGQHLSTNQEIFGVGLGNFFGAFIGAMPVSGSAARSSLNFENGA HHHHHHHHCCCCEEECCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHCCCCCCCCH KTRLAAIVSSLTVALILFAFGFLIRHIPVAAFAALLVASASNIVNLKQLFVCLKATRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FVLILTILSCIFFRLDIAFYIGVIMSISLYLKKAAIPQLVEFTVDNEGVLHTIDHHHLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHCCC PRSIRFIKVEGELFFGSADLFQAALKSITEDDTTTRVLILQLKNARDIDATTCLALQQLH CCCEEEEEEECEEEECCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH HYLKSSGRHLIGCGLTHQIWDVLSDSGIIDIVGKSNLFIFDEKHPQLSVQKAFIRAHELL HHHHCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH SIDTANISEIVPPITAMPMPEAISDSQVIDPSSVISPVAN CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure SHSHHDEVSLIAFQKDFEKYSWSAFRLDLLSGLSVSMLTVPQVMAYALVAGLPVSCGIL CCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH ASVFSAIVVAIFCSSRHLIVGPSNAIAILIQACISEILFTYYRDISGPEKEQLILQILSQ HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LMLLVGAIQILAAFFKLGRLTHFVSHTVIIGYISGVALALVINQIFPLLGMPVPRHLSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YEMSVYILTHLTTINWPTALIGVTCLSLLLILRRIDRKLPSGAIVLAIVALVAYFFGYIY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NYFIVNEYQFFNWEYIGKIMEPIALVGETNGEGLIPNWGLPYFNTGIMNNLLPVAFAIAL HHHHEECEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSVMEATTASKSIAVKSGQHLSTNQEIFGVGLGNFFGAFIGAMPVSGSAARSSLNFENGA HHHHHHHHCCCCEEECCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHCCCCCCCCH KTRLAAIVSSLTVALILFAFGFLIRHIPVAAFAALLVASASNIVNLKQLFVCLKATRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FVLILTILSCIFFRLDIAFYIGVIMSISLYLKKAAIPQLVEFTVDNEGVLHTIDHHHLQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHCCC PRSIRFIKVEGELFFGSADLFQAALKSITEDDTTTRVLILQLKNARDIDATTCLALQQLH CCCEEEEEEECEEEECCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH HYLKSSGRHLIGCGLTHQIWDVLSDSGIIDIVGKSNLFIFDEKHPQLSVQKAFIRAHELL HHHHCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHH SIDTANISEIVPPITAMPMPEAISDSQVIDPSSVISPVAN CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]