Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is ywqA [H]
Identifier: 46447118
GI number: 46447118
Start: 1759218
End: 1762988
Strand: Reverse
Name: ywqA [H]
Synonym: pc1484
Alternate gene names: 46447118
Gene position: 1762988-1759218 (Counterclockwise)
Preceding gene: 46447119
Following gene: 46447112
Centisome position: 73.02
GC content: 33.36
Gene sequence:
>3771_bases ATGACTGCTATTCCTTCTTATTTACAACCTTATTTTCAAGATGCAGAAAAATCGCTAAATGCAAAATTAGCGAAAGAGAT TGAATTTTCTGGGGCAACTTATCAAATTCTTGTTGAAGATTTGTACACACATTTAGAGTATTGGGTTTTTCTCCAATTAG AAGCACAAGGAAATATTAAAGATGCTTTTTGTTCGTGTAATAGTCAGGATGAAGGATGCTTACATCAACTTGTTGCTTAT TTGAGTTTATTCAATACAAATGAAATCCCCTTACATTTAAGATTTGAACGATCTTTGTGGAATCATCTGTGTTTTCTTTA TGAAGATCGTTTAAATGACGCATTAATGGAGCTAAAGCAACTCCAACCTGGTCATTATATTTTTCAGTCTAGTTCAGAGA AAATTATTTTTTCTATCAAAGCTTTGAGTGATTCATCGATTTTATTTTTAGATGAATTAGTGACTCCTCGCCCTAAAGAA ACAGAAGAAACTTCTCTAAAATTTTCTAATTTATCCAACGAAGATCTTTTACTTTGGCGTGAGGGTAGGCCTAATCCACA GTTAAGATATGATCTTTCTTATTGGAGTGATTTAGCGAAATGGCTAATGCGTAAACAAGATAATCAAGAAGCGTATCAAG TATCATTCCAGTATTCTAAAAAAAAGCTCCCTAATTGGATACAAATTGATTTCTACGATTTAGAAATAGGGTTTTATTTA TCGGAAGCTAATTTGCCATTCATTATTCCTTCTTTAGCTACTGTCAAATCTCCCTTATCAGTTCGAAATGCTAATAATCA AGGAATTGATCGTATAGAGTATGATAAAACAACGGGAATCATGCGCATATTTGAAGGATCTCTTGAGAAAGCACCTAAAA TTAAAAAGGAATCAGATTCCTTCTTAAATGGGATACGTTTAGAAAATTGGATATTTATTCCTGAAAAGGGGTTTTATACT GATGAACCACATAATCTATTGCAAACTCCAGAATTAGAAGGAGAGCAATTGTCCGTTGCTTTAACTGAGCATCAACGTTT TCTTTCTACTTTATTAATGAATGAAGTAATTCATAGATCTGTACAGGTTCCTTCCTATCAATTGTTTTTCGATAAAAAAT GGAATTTGCATATTGTTGCTTATTTATTTGAAATAGGCGACTTATCTTTAAACTATTCACGAATCATTGGAGATTGGGCT TATCTAGATGGAGAAGGTTTTTATCCCTTAGAAAATAAGCGTTTTGAGGAAGTGGAAACGATTATTCCTATTTATCAAGT ATCAGATTTTGTGACACAAAATCGTGGTTGGTTAAATAACATAGAAGGATTTCATACGCATATTAGAAGCATTGAATATC AATTAAGTTATCAAGTGAGTGAAACAAATCGTCTTACTTTTCAATGCTCCCTAGCTAAAGCAAAACAACGAGCTCGTTTG CAGGATTTTGGAGTATGGGTTTATTTAGAAGAGTATGGATTTTATTCTAAATCCGTTGGCCCATTTAGTCATTTATTAAA GCCTGGTTTTTCATTAAGTCCCGAACAAGTTCCTTTATTTATTCGAATGAATCGCGACGAGCTATCTTTGATTCCTCATT TTTTTTATGAAAAATGTCCTCTCGAAAAAACGAAACTCCATCTTCAGATGACTCAAAAGGGAACAATAAAAATTAATCCT GAATACGTTTTGTTACCTTTTTTAAAAGACACAAATTTTCGTTTGTTTGATGATTTCATCTATATCGAAAAAAAGGGGTT TTATGAACTCTCTGCTCCCTTAAGACTTCCTGAAAAATTTCGTTACCCTGTTGAATTAGCAGGGGAAGAATTAGATTTAT TTCTCTCTTATGAAATGGAAGAAATTCGCCCTTACATTCATGATATCGACCCAAGATTGCTCAAACCTCAAAAAAAACAA TTGGTGACAAGTTTTGTTGAAGCGGAAGAGAAAAAAGGTAAAGGTTGGTATCGCTTTAAGCTATATTATCAAACTGAAAA TGGTATCATCCCTATTACGGCTCTTCGCCAAGCTTTAAACAAAAAGAAGCAACAATTTGCTTTTTTTGAGGCAGGATTAA TCGCTCTTCAAGATAAACAATTAGATTGGATTCGTAGATTAGATAAAGATCGATTTGATAAAGATGAAGAAGTGGTTTTT TTAACAACGTTAGAATTTATGCGCATCAATGCTTTTGAGCAAATACAGTTTTTTGAAACTGAAAATCTTGATTTAGAATC TAGTCAGAAAAATTTTATCGCTTTACAGGAACTTCAAACCCCAGATGTGCCTAATATTACAGGTCTTAACAGTCATTTAA GACCGTATCAAGAAATTGGTGTTCAATGGTTATGGTTTCTTTATCATCAACAATTAGCTGGTTTACTTTGCGATGATATG GGGCTGGGAAAAACCCATCAAGCCATGGCTTTGATAGCTTCTGTAGCTAATCTTTATCGTAATTACGCAGAAGGTATTCA AAGGCATTTTCTTATCGTTTGTCCAACTTCTGTCATTTACCATTGGCAAGATAAATTAGAGCAATTTTTGCCAGGTTTGA GGATTTGTACATTTTTTGGTGTAAAACGTAGTTTAGCAGCTTTTCATCAAAGTTACGATATTCTTCTGACATCTTATGGA ATTCTTCGTAACGAGAAAGAACTTCTCTCTCAAGTGAATTTTGAAATTGCTATTTTCGATGAAATTCAAGTTGCCAAGAA TCAGACAAGTTTAGTTTATGCTGCTTTAAAAAATGTTAAGGCTCAAATGAAATTAGGATTAACGGGGACTCCCATTGAAA ATCATTTGAGAGAATTGAAATCTTTATTTGACATCGTTCTGCCAACTTACATGCCAAACGAAAATGACTATCGAGAGCTT TTTATTAAACCTATTGAAAGAGAATATAATTCACACAGAAAAGATATTCTAAATCGATTAATTAAACCTTTTACATTGCG TCGTAAAAAAGAAGATGTATTGAAAGATTTACCCGAAAAGAGTGAAGAAATAGCCTATTGTGATTTGTCTCCTTATCAAC AGCAACTTTATACAGAAGTTTTAGAACAGCGTAAACGTCATTTAATGCAAGATTTAAAAGATGATCAAACACCTATCCCT TATTTACATATTTTTGCTCTTCTTTCTAGTCTTAAGCAAATTTGTAATCATCCAGCAGTTCATTTGAAAAATCCGGGAGA CTATCAAAAATACTCTTCTGGTAAATGGGAACTTTTTATAGAGCTTTTACGTGAAGCAAGGGAAAGCCAGCAAAAAGTAG TGATTTTTTCACAGTATCTTGGCATGCTAGATATTATTGAAAATTACTTGAATGATCAAAAAATTGGTTACGCGTCGATT CGAGGATCAACACAAAATCGAAAAGAACAGCTGCAAAAATTTAATCACGATCCTTCGTGTGAAGTTTTTGTGGGATCACT TCAAGCCGCAGGATTGGGAATTGACTTAACAGCAGCTTCTGTTGTAATTCATTATGATCGTTGGTGGAACGCGGCACGTG AAAATCAAGCGACAGATCGTGTTCACCGAATTGGGCAAATGAAAGGAGTTCAAGTTTTTAAACTTGTGACAAAAGGAACT TTTGAAGAAAAAATTGACGCAATGATAAACCGAAAAGGTCAGCTAATGGAAGAAATCATTGGCGTTGATGATCAAAATAC CTTGAAAAAGTTCACCAGAAATGAACTAATTGAACTTCTCACTTACGAAGAAAAAGATGATGATCATATGACTCTTTCAG ATGTAGAATAA
Upstream 100 bases:
>100_bases TGCAATTGGCTCTAGAATTTATACATTTATTTTTCTGATTATTATATGATTAAAAGTTTTGAAGAAAATTTGATTGTCCT TTTAGCTTTAAAGAGAAACG
Downstream 100 bases:
>100_bases TAAAAAAATTCTTCTAATTTTACAAATTATTTTATAGAACGACCCAAGATTCTTTTTAATGATCCATCATCTTCTTCATC GTAAATATCACCGACTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1256; Mature: 1255
Protein sequence:
>1256_residues MTAIPSYLQPYFQDAEKSLNAKLAKEIEFSGATYQILVEDLYTHLEYWVFLQLEAQGNIKDAFCSCNSQDEGCLHQLVAY LSLFNTNEIPLHLRFERSLWNHLCFLYEDRLNDALMELKQLQPGHYIFQSSSEKIIFSIKALSDSSILFLDELVTPRPKE TEETSLKFSNLSNEDLLLWREGRPNPQLRYDLSYWSDLAKWLMRKQDNQEAYQVSFQYSKKKLPNWIQIDFYDLEIGFYL SEANLPFIIPSLATVKSPLSVRNANNQGIDRIEYDKTTGIMRIFEGSLEKAPKIKKESDSFLNGIRLENWIFIPEKGFYT DEPHNLLQTPELEGEQLSVALTEHQRFLSTLLMNEVIHRSVQVPSYQLFFDKKWNLHIVAYLFEIGDLSLNYSRIIGDWA YLDGEGFYPLENKRFEEVETIIPIYQVSDFVTQNRGWLNNIEGFHTHIRSIEYQLSYQVSETNRLTFQCSLAKAKQRARL QDFGVWVYLEEYGFYSKSVGPFSHLLKPGFSLSPEQVPLFIRMNRDELSLIPHFFYEKCPLEKTKLHLQMTQKGTIKINP EYVLLPFLKDTNFRLFDDFIYIEKKGFYELSAPLRLPEKFRYPVELAGEELDLFLSYEMEEIRPYIHDIDPRLLKPQKKQ LVTSFVEAEEKKGKGWYRFKLYYQTENGIIPITALRQALNKKKQQFAFFEAGLIALQDKQLDWIRRLDKDRFDKDEEVVF LTTLEFMRINAFEQIQFFETENLDLESSQKNFIALQELQTPDVPNITGLNSHLRPYQEIGVQWLWFLYHQQLAGLLCDDM GLGKTHQAMALIASVANLYRNYAEGIQRHFLIVCPTSVIYHWQDKLEQFLPGLRICTFFGVKRSLAAFHQSYDILLTSYG ILRNEKELLSQVNFEIAIFDEIQVAKNQTSLVYAALKNVKAQMKLGLTGTPIENHLRELKSLFDIVLPTYMPNENDYREL FIKPIEREYNSHRKDILNRLIKPFTLRRKKEDVLKDLPEKSEEIAYCDLSPYQQQLYTEVLEQRKRHLMQDLKDDQTPIP YLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFIELLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASI RGSTQNRKEQLQKFNHDPSCEVFVGSLQAAGLGIDLTAASVVIHYDRWWNAARENQATDRVHRIGQMKGVQVFKLVTKGT FEEKIDAMINRKGQLMEEIIGVDDQNTLKKFTRNELIELLTYEEKDDDHMTLSDVE
Sequences:
>Translated_1256_residues MTAIPSYLQPYFQDAEKSLNAKLAKEIEFSGATYQILVEDLYTHLEYWVFLQLEAQGNIKDAFCSCNSQDEGCLHQLVAY LSLFNTNEIPLHLRFERSLWNHLCFLYEDRLNDALMELKQLQPGHYIFQSSSEKIIFSIKALSDSSILFLDELVTPRPKE TEETSLKFSNLSNEDLLLWREGRPNPQLRYDLSYWSDLAKWLMRKQDNQEAYQVSFQYSKKKLPNWIQIDFYDLEIGFYL SEANLPFIIPSLATVKSPLSVRNANNQGIDRIEYDKTTGIMRIFEGSLEKAPKIKKESDSFLNGIRLENWIFIPEKGFYT DEPHNLLQTPELEGEQLSVALTEHQRFLSTLLMNEVIHRSVQVPSYQLFFDKKWNLHIVAYLFEIGDLSLNYSRIIGDWA YLDGEGFYPLENKRFEEVETIIPIYQVSDFVTQNRGWLNNIEGFHTHIRSIEYQLSYQVSETNRLTFQCSLAKAKQRARL QDFGVWVYLEEYGFYSKSVGPFSHLLKPGFSLSPEQVPLFIRMNRDELSLIPHFFYEKCPLEKTKLHLQMTQKGTIKINP EYVLLPFLKDTNFRLFDDFIYIEKKGFYELSAPLRLPEKFRYPVELAGEELDLFLSYEMEEIRPYIHDIDPRLLKPQKKQ LVTSFVEAEEKKGKGWYRFKLYYQTENGIIPITALRQALNKKKQQFAFFEAGLIALQDKQLDWIRRLDKDRFDKDEEVVF LTTLEFMRINAFEQIQFFETENLDLESSQKNFIALQELQTPDVPNITGLNSHLRPYQEIGVQWLWFLYHQQLAGLLCDDM GLGKTHQAMALIASVANLYRNYAEGIQRHFLIVCPTSVIYHWQDKLEQFLPGLRICTFFGVKRSLAAFHQSYDILLTSYG ILRNEKELLSQVNFEIAIFDEIQVAKNQTSLVYAALKNVKAQMKLGLTGTPIENHLRELKSLFDIVLPTYMPNENDYREL FIKPIEREYNSHRKDILNRLIKPFTLRRKKEDVLKDLPEKSEEIAYCDLSPYQQQLYTEVLEQRKRHLMQDLKDDQTPIP YLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFIELLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASI RGSTQNRKEQLQKFNHDPSCEVFVGSLQAAGLGIDLTAASVVIHYDRWWNAARENQATDRVHRIGQMKGVQVFKLVTKGT FEEKIDAMINRKGQLMEEIIGVDDQNTLKKFTRNELIELLTYEEKDDDHMTLSDVE >Mature_1255_residues TAIPSYLQPYFQDAEKSLNAKLAKEIEFSGATYQILVEDLYTHLEYWVFLQLEAQGNIKDAFCSCNSQDEGCLHQLVAYL SLFNTNEIPLHLRFERSLWNHLCFLYEDRLNDALMELKQLQPGHYIFQSSSEKIIFSIKALSDSSILFLDELVTPRPKET EETSLKFSNLSNEDLLLWREGRPNPQLRYDLSYWSDLAKWLMRKQDNQEAYQVSFQYSKKKLPNWIQIDFYDLEIGFYLS EANLPFIIPSLATVKSPLSVRNANNQGIDRIEYDKTTGIMRIFEGSLEKAPKIKKESDSFLNGIRLENWIFIPEKGFYTD EPHNLLQTPELEGEQLSVALTEHQRFLSTLLMNEVIHRSVQVPSYQLFFDKKWNLHIVAYLFEIGDLSLNYSRIIGDWAY LDGEGFYPLENKRFEEVETIIPIYQVSDFVTQNRGWLNNIEGFHTHIRSIEYQLSYQVSETNRLTFQCSLAKAKQRARLQ DFGVWVYLEEYGFYSKSVGPFSHLLKPGFSLSPEQVPLFIRMNRDELSLIPHFFYEKCPLEKTKLHLQMTQKGTIKINPE YVLLPFLKDTNFRLFDDFIYIEKKGFYELSAPLRLPEKFRYPVELAGEELDLFLSYEMEEIRPYIHDIDPRLLKPQKKQL VTSFVEAEEKKGKGWYRFKLYYQTENGIIPITALRQALNKKKQQFAFFEAGLIALQDKQLDWIRRLDKDRFDKDEEVVFL TTLEFMRINAFEQIQFFETENLDLESSQKNFIALQELQTPDVPNITGLNSHLRPYQEIGVQWLWFLYHQQLAGLLCDDMG LGKTHQAMALIASVANLYRNYAEGIQRHFLIVCPTSVIYHWQDKLEQFLPGLRICTFFGVKRSLAAFHQSYDILLTSYGI LRNEKELLSQVNFEIAIFDEIQVAKNQTSLVYAALKNVKAQMKLGLTGTPIENHLRELKSLFDIVLPTYMPNENDYRELF IKPIEREYNSHRKDILNRLIKPFTLRRKKEDVLKDLPEKSEEIAYCDLSPYQQQLYTEVLEQRKRHLMQDLKDDQTPIPY LHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFIELLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASIR GSTQNRKEQLQKFNHDPSCEVFVGSLQAAGLGIDLTAASVVIHYDRWWNAARENQATDRVHRIGQMKGVQVFKLVTKGTF EEKIDAMINRKGQLMEEIIGVDDQNTLKKFTRNELIELLTYEEKDDDHMTLSDVE
Specific function: Unknown
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI27477070, Length=551, Percent_Identity=31.7604355716878, Blast_Score=260, Evalue=7e-69, Organism=Homo sapiens, GI164419749, Length=506, Percent_Identity=32.6086956521739, Blast_Score=244, Evalue=5e-64, Organism=Homo sapiens, GI190358536, Length=536, Percent_Identity=30.9701492537313, Blast_Score=241, Evalue=3e-63, Organism=Homo sapiens, GI190358532, Length=536, Percent_Identity=30.9701492537313, Blast_Score=241, Evalue=3e-63, Organism=Homo sapiens, GI190358534, Length=536, Percent_Identity=30.9701492537313, Blast_Score=240, Evalue=7e-63, Organism=Homo sapiens, GI21071058, Length=570, Percent_Identity=31.5789473684211, Blast_Score=239, Evalue=1e-62, Organism=Homo sapiens, GI21071044, Length=518, Percent_Identity=31.6602316602317, Blast_Score=238, Evalue=4e-62, Organism=Homo sapiens, GI148612870, Length=473, Percent_Identity=34.46088794926, Blast_Score=231, Evalue=4e-60, Organism=Homo sapiens, GI4557565, Length=521, Percent_Identity=31.4779270633397, Blast_Score=228, Evalue=4e-59, Organism=Homo sapiens, GI118421089, Length=465, Percent_Identity=33.3333333333333, Blast_Score=223, Evalue=8e-58, Organism=Homo sapiens, GI24308089, Length=520, Percent_Identity=30.7692307692308, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI52630322, Length=519, Percent_Identity=30.4431599229287, Blast_Score=214, Evalue=4e-55, Organism=Homo sapiens, GI52630326, Length=519, Percent_Identity=30.4431599229287, Blast_Score=214, Evalue=4e-55, Organism=Homo sapiens, GI158420731, Length=519, Percent_Identity=30.4431599229287, Blast_Score=214, Evalue=6e-55, Organism=Homo sapiens, GI192807312, Length=519, Percent_Identity=31.2138728323699, Blast_Score=213, Evalue=9e-55, Organism=Homo sapiens, GI21071056, Length=519, Percent_Identity=31.2138728323699, Blast_Score=213, Evalue=9e-55, Organism=Homo sapiens, GI192807323, Length=519, Percent_Identity=31.2138728323699, Blast_Score=213, Evalue=1e-54, Organism=Homo sapiens, GI68299795, Length=480, Percent_Identity=33.125, Blast_Score=209, Evalue=1e-53, Organism=Homo sapiens, GI51599156, Length=524, Percent_Identity=30.7251908396947, Blast_Score=207, Evalue=5e-53, Organism=Homo sapiens, GI192807318, Length=499, Percent_Identity=31.2625250501002, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI192807316, Length=499, Percent_Identity=31.2625250501002, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI192807320, Length=499, Percent_Identity=31.2625250501002, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI192807314, Length=499, Percent_Identity=31.2625250501002, Blast_Score=207, Evalue=6e-53, Organism=Homo sapiens, GI48255898, Length=499, Percent_Identity=30.8617234468938, Blast_Score=206, Evalue=9e-53, Organism=Homo sapiens, GI48255900, Length=499, Percent_Identity=30.8617234468938, Blast_Score=206, Evalue=1e-52, Organism=Homo sapiens, GI21914927, Length=562, Percent_Identity=29.8932384341637, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI58331268, Length=556, Percent_Identity=29.6762589928058, Blast_Score=201, Evalue=3e-51, Organism=Homo sapiens, GI114326455, Length=515, Percent_Identity=29.3203883495146, Blast_Score=200, Evalue=8e-51, Organism=Homo sapiens, GI282165704, Length=515, Percent_Identity=29.3203883495146, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI58219008, Length=545, Percent_Identity=27.3394495412844, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI6912622, Length=534, Percent_Identity=29.0262172284644, Blast_Score=190, Evalue=9e-48, Organism=Homo sapiens, GI54112403, Length=516, Percent_Identity=28.2945736434109, Blast_Score=189, Evalue=2e-47, Organism=Homo sapiens, GI29244924, Length=514, Percent_Identity=27.6264591439689, Blast_Score=188, Evalue=3e-47, Organism=Homo sapiens, GI95147342, Length=521, Percent_Identity=29.5585412667946, Blast_Score=187, Evalue=7e-47, Organism=Homo sapiens, GI216548193, Length=528, Percent_Identity=27.6515151515151, Blast_Score=161, Evalue=3e-39, Organism=Homo sapiens, GI216548186, Length=528, Percent_Identity=27.6515151515151, Blast_Score=161, Evalue=3e-39, Organism=Homo sapiens, GI146219843, Length=318, Percent_Identity=32.0754716981132, Blast_Score=158, Evalue=4e-38, Organism=Homo sapiens, GI38708321, Length=320, Percent_Identity=30.3125, Blast_Score=150, Evalue=5e-36, Organism=Homo sapiens, GI40807471, Length=595, Percent_Identity=25.546218487395, Blast_Score=145, Evalue=3e-34, Organism=Homo sapiens, GI56549696, Length=315, Percent_Identity=31.1111111111111, Blast_Score=132, Evalue=2e-30, Organism=Homo sapiens, GI187761314, Length=601, Percent_Identity=28.1198003327787, Blast_Score=130, Evalue=9e-30, Organism=Homo sapiens, GI21071060, Length=601, Percent_Identity=28.1198003327787, Blast_Score=130, Evalue=9e-30, Organism=Homo sapiens, GI62860046, Length=467, Percent_Identity=25.6959314775161, Blast_Score=122, Evalue=2e-27, Organism=Homo sapiens, GI20336205, Length=198, Percent_Identity=36.8686868686869, Blast_Score=93, Evalue=2e-18, Organism=Homo sapiens, GI20336209, Length=197, Percent_Identity=37.0558375634518, Blast_Score=93, Evalue=2e-18, Organism=Homo sapiens, GI168823443, Length=199, Percent_Identity=33.1658291457286, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI21071052, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI21071054, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI27436873, Length=123, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI289547541, Length=123, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32563629, Length=522, Percent_Identity=32.5670498084291, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI25144179, Length=457, Percent_Identity=31.5098468271335, Blast_Score=219, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17569817, Length=529, Percent_Identity=30.2457466918715, Blast_Score=215, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17551114, Length=481, Percent_Identity=30.977130977131, Blast_Score=215, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17539642, Length=482, Percent_Identity=30.2904564315353, Blast_Score=213, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17562600, Length=494, Percent_Identity=30.3643724696356, Blast_Score=203, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71988744, Length=534, Percent_Identity=29.4007490636704, Blast_Score=194, Evalue=2e-49, Organism=Caenorhabditis elegans, GI193204424, Length=522, Percent_Identity=28.544061302682, Blast_Score=193, Evalue=5e-49, Organism=Caenorhabditis elegans, GI71991518, Length=476, Percent_Identity=29.4117647058824, Blast_Score=190, Evalue=5e-48, Organism=Caenorhabditis elegans, GI193203140, Length=482, Percent_Identity=30.4979253112033, Blast_Score=183, Evalue=6e-46, Organism=Caenorhabditis elegans, GI71995707, Length=516, Percent_Identity=27.3255813953488, Blast_Score=181, Evalue=2e-45, Organism=Caenorhabditis elegans, GI115534248, Length=341, Percent_Identity=33.4310850439883, Blast_Score=179, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17508659, Length=529, Percent_Identity=25.7088846880907, Blast_Score=155, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17552194, Length=508, Percent_Identity=26.3779527559055, Blast_Score=122, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148960, Length=508, Percent_Identity=26.3779527559055, Blast_Score=122, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148958, Length=508, Percent_Identity=26.3779527559055, Blast_Score=122, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540630, Length=178, Percent_Identity=32.5842696629214, Blast_Score=97, Evalue=5e-20, Organism=Caenorhabditis elegans, GI193203249, Length=167, Percent_Identity=32.3353293413174, Blast_Score=94, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538806, Length=203, Percent_Identity=30.5418719211823, Blast_Score=87, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17561718, Length=133, Percent_Identity=30.0751879699248, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325175, Length=552, Percent_Identity=33.3333333333333, Blast_Score=285, Evalue=5e-77, Organism=Saccharomyces cerevisiae, GI6319722, Length=478, Percent_Identity=33.0543933054393, Blast_Score=231, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6324879, Length=503, Percent_Identity=31.2127236580517, Blast_Score=218, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6324864, Length=463, Percent_Identity=32.1814254859611, Blast_Score=214, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6321012, Length=504, Percent_Identity=30.5555555555556, Blast_Score=210, Evalue=9e-55, Organism=Saccharomyces cerevisiae, GI6322495, Length=530, Percent_Identity=28.8679245283019, Blast_Score=208, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6322065, Length=462, Percent_Identity=32.2510822510823, Blast_Score=203, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6319547, Length=531, Percent_Identity=27.3069679849341, Blast_Score=179, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321275, Length=469, Percent_Identity=27.9317697228145, Blast_Score=162, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6320541, Length=379, Percent_Identity=28.4960422163588, Blast_Score=155, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319300, Length=292, Percent_Identity=30.4794520547945, Blast_Score=147, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321289, Length=314, Percent_Identity=28.0254777070064, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321153, Length=286, Percent_Identity=31.4685314685315, Blast_Score=128, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6319590, Length=162, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324765, Length=169, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323060, Length=321, Percent_Identity=25.2336448598131, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281361889, Length=560, Percent_Identity=31.6071428571429, Blast_Score=257, Evalue=5e-68, Organism=Drosophila melanogaster, GI24653134, Length=504, Percent_Identity=31.9444444444444, Blast_Score=229, Evalue=8e-60, Organism=Drosophila melanogaster, GI24653132, Length=504, Percent_Identity=31.9444444444444, Blast_Score=229, Evalue=8e-60, Organism=Drosophila melanogaster, GI17737463, Length=504, Percent_Identity=31.9444444444444, Blast_Score=229, Evalue=8e-60, Organism=Drosophila melanogaster, GI85724914, Length=541, Percent_Identity=28.6506469500924, Blast_Score=213, Evalue=9e-55, Organism=Drosophila melanogaster, GI24583161, Length=541, Percent_Identity=28.6506469500924, Blast_Score=212, Evalue=1e-54, Organism=Drosophila melanogaster, GI24666729, Length=511, Percent_Identity=29.3542074363992, Blast_Score=209, Evalue=8e-54, Organism=Drosophila melanogaster, GI281366478, Length=521, Percent_Identity=28.9827255278311, Blast_Score=208, Evalue=2e-53, Organism=Drosophila melanogaster, GI24667055, Length=521, Percent_Identity=28.9827255278311, Blast_Score=208, Evalue=2e-53, Organism=Drosophila melanogaster, GI62472261, Length=521, Percent_Identity=28.9827255278311, Blast_Score=208, Evalue=2e-53, Organism=Drosophila melanogaster, GI24664914, Length=495, Percent_Identity=30.3030303030303, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI17985967, Length=495, Percent_Identity=30.3030303030303, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI24664907, Length=495, Percent_Identity=30.3030303030303, Blast_Score=205, Evalue=2e-52, Organism=Drosophila melanogaster, GI28574896, Length=495, Percent_Identity=30.3030303030303, Blast_Score=205, Evalue=2e-52, Organism=Drosophila melanogaster, GI221330583, Length=522, Percent_Identity=29.3103448275862, Blast_Score=201, Evalue=4e-51, Organism=Drosophila melanogaster, GI17137266, Length=471, Percent_Identity=30.1486199575372, Blast_Score=197, Evalue=4e-50, Organism=Drosophila melanogaster, GI17986031, Length=523, Percent_Identity=29.2543021032505, Blast_Score=190, Evalue=6e-48, Organism=Drosophila melanogaster, GI17136368, Length=527, Percent_Identity=28.4629981024668, Blast_Score=178, Evalue=2e-44, Organism=Drosophila melanogaster, GI28573600, Length=303, Percent_Identity=32.6732673267327, Blast_Score=156, Evalue=1e-37, Organism=Drosophila melanogaster, GI24656966, Length=303, Percent_Identity=32.6732673267327, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI24656962, Length=303, Percent_Identity=32.6732673267327, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI24648168, Length=320, Percent_Identity=28.75, Blast_Score=151, Evalue=2e-36, Organism=Drosophila melanogaster, GI85724912, Length=315, Percent_Identity=30.1587301587302, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI24581780, Length=482, Percent_Identity=27.1784232365145, Blast_Score=124, Evalue=6e-28, Organism=Drosophila melanogaster, GI62484263, Length=191, Percent_Identity=30.8900523560209, Blast_Score=83, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356675, Length=297, Percent_Identity=25.2525252525253, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24650076, Length=297, Percent_Identity=25.2525252525253, Blast_Score=82, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644932, Length=153, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=4e-15, Organism=Drosophila melanogaster, GI281361297, Length=223, Percent_Identity=28.2511210762332, Blast_Score=75, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022138 - InterPro: IPR000330 [H]
Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]
EC number: NA
Molecular weight: Translated: 147319; Mature: 147188
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIPSYLQPYFQDAEKSLNAKLAKEIEFSGATYQILVEDLYTHLEYWVFLQLEAQGNIK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCH DAFCSCNSQDEGCLHQLVAYLSLFNTNEIPLHLRFERSLWNHLCFLYEDRLNDALMELKQ HHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LQPGHYIFQSSSEKIIFSIKALSDSSILFLDELVTPRPKETEETSLKFSNLSNEDLLLWR CCCCCEEEECCCCEEEEEEEECCCCCEEEEHHHCCCCCCCCCHHCEEECCCCCCCEEEEE EGRPNPQLRYDLSYWSDLAKWLMRKQDNQEAYQVSFQYSKKKLPNWIQIDFYDLEIGFYL CCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEEEEEEEEEEEEEEE SEANLPFIIPSLATVKSPLSVRNANNQGIDRIEYDKTTGIMRIFEGSLEKAPKIKKESDS ECCCCCEEECCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCHHHHCCCCCCCCHH FLNGIRLENWIFIPEKGFYTDEPHNLLQTPELEGEQLSVALTEHQRFLSTLLMNEVIHRS HHCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH VQVPSYQLFFDKKWNLHIVAYLFEIGDLSLNYSRIIGDWAYLDGEGFYPLENKRFEEVET CCCCCEEEEEECCCCEEEEEEEHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHH IIPIYQVSDFVTQNRGWLNNIEGFHTHIRSIEYQLSYQVSETNRLTFQCSLAKAKQRARL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCEEEEEEEHHHHHHHHHH QDFGVWVYLEEYGFYSKSVGPFSHLLKPGFSLSPEQVPLFIRMNRDELSLIPHFFYEKCP HHCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCC LEKTKLHLQMTQKGTIKINPEYVLLPFLKDTNFRLFDDFIYIEKKGFYELSAPLRLPEKF CCHHEEEEEEECCCEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCEEECCCCCCCHHC RYPVELAGEELDLFLSYEMEEIRPYIHDIDPRLLKPQKKQLVTSFVEAEEKKGKGWYRFK CCCHHCCCCCEEEEEECCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEE LYYQTENGIIPITALRQALNKKKQQFAFFEAGLIALQDKQLDWIRRLDKDRFDKDEEVVF EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHCHHHCCCCCCEEE LTTLEFMRINAFEQIQFFETENLDLESSQKNFIALQELQTPDVPNITGLNSHLRPYQEIG EEEHHHHHCCHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH VQWLWFLYHQQLAGLLCDDMGLGKTHQAMALIASVANLYRNYAEGIQRHFLIVCPTSVIY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHH HWQDKLEQFLPGLRICTFFGVKRSLAAFHQSYDILLTSYGILRNEKELLSQVNFEIAIFD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEC EIQVAKNQTSLVYAALKNVKAQMKLGLTGTPIENHLRELKSLFDIVLPTYMPNENDYREL CHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FIKPIEREYNSHRKDILNRLIKPFTLRRKKEDVLKDLPEKSEEIAYCDLSPYQQQLYTEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH LEQRKRHLMQDLKDDQTPIPYLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHH ELLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASIRGSTQNRKEQLQKFNHDPSC HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCC EVFVGSLQAAGLGIDLTAASVVIHYDRWWNAARENQATDRVHRIGQMKGVQVFKLVTKGT EEEEECHHHCCCCEEEEEEEEEEEEHHHHCHHHCCHHHHHHHHHHHCCCHHHHHHHHCCC FEEKIDAMINRKGQLMEEIIGVDDQNTLKKFTRNELIELLTYEEKDDDHMTLSDVE HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC >Mature Secondary Structure TAIPSYLQPYFQDAEKSLNAKLAKEIEFSGATYQILVEDLYTHLEYWVFLQLEAQGNIK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCH DAFCSCNSQDEGCLHQLVAYLSLFNTNEIPLHLRFERSLWNHLCFLYEDRLNDALMELKQ HHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH LQPGHYIFQSSSEKIIFSIKALSDSSILFLDELVTPRPKETEETSLKFSNLSNEDLLLWR CCCCCEEEECCCCEEEEEEEECCCCCEEEEHHHCCCCCCCCCHHCEEECCCCCCCEEEEE EGRPNPQLRYDLSYWSDLAKWLMRKQDNQEAYQVSFQYSKKKLPNWIQIDFYDLEIGFYL CCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEEEEEEEEEEEEEEE SEANLPFIIPSLATVKSPLSVRNANNQGIDRIEYDKTTGIMRIFEGSLEKAPKIKKESDS ECCCCCEEECCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCHHHHCCCCCCCCHH FLNGIRLENWIFIPEKGFYTDEPHNLLQTPELEGEQLSVALTEHQRFLSTLLMNEVIHRS HHCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH VQVPSYQLFFDKKWNLHIVAYLFEIGDLSLNYSRIIGDWAYLDGEGFYPLENKRFEEVET CCCCCEEEEEECCCCEEEEEEEHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHH IIPIYQVSDFVTQNRGWLNNIEGFHTHIRSIEYQLSYQVSETNRLTFQCSLAKAKQRARL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCEEEEEEEHHHHHHHHHH QDFGVWVYLEEYGFYSKSVGPFSHLLKPGFSLSPEQVPLFIRMNRDELSLIPHFFYEKCP HHCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCC LEKTKLHLQMTQKGTIKINPEYVLLPFLKDTNFRLFDDFIYIEKKGFYELSAPLRLPEKF CCHHEEEEEEECCCEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCEEECCCCCCCHHC RYPVELAGEELDLFLSYEMEEIRPYIHDIDPRLLKPQKKQLVTSFVEAEEKKGKGWYRFK CCCHHCCCCCEEEEEECCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCEEEEE LYYQTENGIIPITALRQALNKKKQQFAFFEAGLIALQDKQLDWIRRLDKDRFDKDEEVVF EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHCHHHCCCCCCEEE LTTLEFMRINAFEQIQFFETENLDLESSQKNFIALQELQTPDVPNITGLNSHLRPYQEIG EEEHHHHHCCHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH VQWLWFLYHQQLAGLLCDDMGLGKTHQAMALIASVANLYRNYAEGIQRHFLIVCPTSVIY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHH HWQDKLEQFLPGLRICTFFGVKRSLAAFHQSYDILLTSYGILRNEKELLSQVNFEIAIFD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEC EIQVAKNQTSLVYAALKNVKAQMKLGLTGTPIENHLRELKSLFDIVLPTYMPNENDYREL CHHHHCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FIKPIEREYNSHRKDILNRLIKPFTLRRKKEDVLKDLPEKSEEIAYCDLSPYQQQLYTEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH LEQRKRHLMQDLKDDQTPIPYLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHH ELLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASIRGSTQNRKEQLQKFNHDPSC HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCC EVFVGSLQAAGLGIDLTAASVVIHYDRWWNAARENQATDRVHRIGQMKGVQVFKLVTKGT EEEEECHHHCCCCEEEEEEEEEEEEHHHHCHHHCCHHHHHHHHHHHCCCHHHHHHHHCCC FEEKIDAMINRKGQLMEEIIGVDDQNTLKKFTRNELIELLTYEEKDDDHMTLSDVE HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9353933 [H]