Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447084
Identifier: 46447084
GI number: 46447084
Start: 1722785
End: 1722979
Strand: Reverse
Name: 46447084
Synonym: pc1450
Alternate gene names: NA
Gene position: 1722979-1722785 (Counterclockwise)
Preceding gene: 46447085
Following gene: 46447083
Centisome position: 71.36
GC content: 32.31
Gene sequence:
>195_bases ATGCCTTTTGGTTTAATTATTAAACAAAGCCGTAGAAATGCGATAAAGAAGGGTTTAATTGCCAGGTTAAGGAATTTATT GATCAGATATCTCCATACTAAACCTGCCCCTTTTCAAAGTCTTCAAACATTTGATATTGAATATCTACTTTTAACTCTTT CTCGAATCAAAAACGTCTGTATTGATCGTCTTTAG
Upstream 100 bases:
>100_bases CTTTTTATAAATCAAAAAGAATTTCAAATTGTGCATGATAACTTCTTTAACGGTAAGTTAACTAAAGGATACTCTCTTTA TTGCGTTCAACAGGCAATCC
Downstream 100 bases:
>100_bases AGAAAGAGTTTTTTTAGCAATTTTCAGGAAAAATAGGATCATCGATCACTCTATGATCATTTTAATTAATTTTTTCATGA ATCATATATAACATTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MPFGLIIKQSRRNAIKKGLIARLRNLLIRYLHTKPAPFQSLQTFDIEYLLLTLSRIKNVCIDRL
Sequences:
>Translated_64_residues MPFGLIIKQSRRNAIKKGLIARLRNLLIRYLHTKPAPFQSLQTFDIEYLLLTLSRIKNVCIDRL >Mature_63_residues PFGLIIKQSRRNAIKKGLIARLRNLLIRYLHTKPAPFQSLQTFDIEYLLLTLSRIKNVCIDRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7523; Mature: 7392
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFGLIIKQSRRNAIKKGLIARLRNLLIRYLHTKPAPFQSLQTFDIEYLLLTLSRIKNVC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IDRL HCCC >Mature Secondary Structure PFGLIIKQSRRNAIKKGLIARLRNLLIRYLHTKPAPFQSLQTFDIEYLLLTLSRIKNVC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IDRL HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA