Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447085
Identifier: 46447085
GI number: 46447085
Start: 1723169
End: 1723504
Strand: Reverse
Name: 46447085
Synonym: pc1451
Alternate gene names: NA
Gene position: 1723504-1723169 (Counterclockwise)
Preceding gene: 46447089
Following gene: 46447084
Centisome position: 71.38
GC content: 37.2
Gene sequence:
>336_bases ATGTCTACGTTTGAAGTTATTTCCGTTCTGCTATCCTCTGGTGTTTTCATAGGGATTCTTGCTCTATTTTATCGTTTTGG ACGTAATCAAGAACGTATAGATAACAGCTTCAAGGCTATTGATGAAAAGTTAAAGGCCGTAGACGAGCGTTTCAATAAAA TGGATGAACGTTTTGATAAAGTTGACTCTAGACTTAATAGAATCGACGAACGTTTCAATTCCCTAGAAACGCGTATGGCT ATTGTAGAAACGCGAATAGGCGACATAGCAAGGTATGTTAGTTATTTAATTTGGCATAGTCAAACCGTTTCACCTAAAGA GATTCAAGAACACTAG
Upstream 100 bases:
>100_bases TTACTTGGACCAAATCGCAAAGCTCTTAAAGGGGATCTCGTAATTGACACGAAAAAAGTTTGCTCGTAGAATACTATATT TAAAGAGAAAGGTTAAAATT
Downstream 100 bases:
>100_bases TTTGACAAGGTTTAAAGTTTTTCCTAGAATGTTTTTTTGAGAATGGCTTGTCTACGGTTAACTATATTCAGTTTAAACCG ACAAATCAGCTTTTTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSTFEVISVLLSSGVFIGILALFYRFGRNQERIDNSFKAIDEKLKAVDERFNKMDERFDKVDSRLNRIDERFNSLETRMA IVETRIGDIARYVSYLIWHSQTVSPKEIQEH
Sequences:
>Translated_111_residues MSTFEVISVLLSSGVFIGILALFYRFGRNQERIDNSFKAIDEKLKAVDERFNKMDERFDKVDSRLNRIDERFNSLETRMA IVETRIGDIARYVSYLIWHSQTVSPKEIQEH >Mature_110_residues STFEVISVLLSSGVFIGILALFYRFGRNQERIDNSFKAIDEKLKAVDERFNKMDERFDKVDSRLNRIDERFNSLETRMAI VETRIGDIARYVSYLIWHSQTVSPKEIQEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13092; Mature: 12961
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFEVISVLLSSGVFIGILALFYRFGRNQERIDNSFKAIDEKLKAVDERFNKMDERFDK CCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDSRLNRIDERFNSLETRMAIVETRIGDIARYVSYLIWHSQTVSPKEIQEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure STFEVISVLLSSGVFIGILALFYRFGRNQERIDNSFKAIDEKLKAVDERFNKMDERFDK CHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDSRLNRIDERFNSLETRMAIVETRIGDIARYVSYLIWHSQTVSPKEIQEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA