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The map label for this gene is 46447083

Identifier: 46447083

GI number: 46447083

Start: 1720498

End: 1722591

Strand: Reverse

Name: 46447083

Synonym: pc1449

Alternate gene names: NA

Gene position: 1722591-1720498 (Counterclockwise)

Preceding gene: 46447084

Following gene: 46447061

Centisome position: 71.34

GC content: 32.95

Gene sequence:

>2094_bases
ATGATTCGGAATGAAACAATTAGATTTCGAGCTCAGAATACTTTATCAGAAGCTAGCAACATATCTGATAACCTCTGTGG
GGTATTAGTACCAGTTGAAATCGTTACTCATATTTTTACTTTTTTAACGGAAAATTCAAAAAATCTGCTTAATCTAAGGT
CTGTTTGTTGGCGGTTTAAAGCTATCATCGAAACAAATGGCAATTGCAAACGATTCTTCAACATAAGCACCTCAAGAGAT
CTAACATTCCAAAACAGTTCAAAAATTTCAAACTATATCAGCAAATTCCTCTTGCATCTGACCCAATACCTAACCTCTAA
ATTAGGCGTTAATAAATTATTAGTCTGCCCATCTTTTAAAGATCGTTTTGCTATAACAATTCTTAATATATTTTTGCAAA
AAGTTTTAAGAAATTCTATTAGTCTAGCTGATAAACAAGCTTTAATAGAAAAAATTGAACACCTAAAAACCCGCCTTCAT
ATTACCATAGAACCCAACACAATTTCCTCAAGTTTTGAATTGCAAGAAAATCAAAACCAGGAAAACTGCAACCCTCTTTT
AGAATTATTTATCAATTTTGGAATCGATCCAACGGCAGTTAATAGTCAAACTGGTCATTCTTTATTAGGAGAAGCGGCAG
CCCTACAAAATACACAAGGCATAAAGATCATATTGGAAGCTCTTCAAAGCAAAGGAGTAAGTGGCGAAGAGCTAATCAAA
AAATTAGACACGCAAGATAATTGGGGAAAAACAGCTCTTCATCATGCAATGCGGAGCATTGATACGCCTTATTATAATCG
AAAAAAAATGAAAGAAACCGAGAACTTATTGGTTGAACATGGTGCTGACTCACACATTGAAGATGACGACGGAGGCACGC
CTTTTAATAATTTTCAAATTTCAATAGAAGTCAAAAAACTTATAAAAAAAGATTATAATAAATTATGGATTAAAGAAAAT
TCAGAAAAAGAATCTAGTCAAATTAAAGAATTGTATGCAGCGATAAAACAAAAGAACCCAGATGAAGTCAAGAGACTCCT
TGAAACAGAGAAAAACCTTGTTAATCACCCAAATCTAAGACGTGGTGGGATAACACCTTTAATATATGCTTTATATTATG
GAGATTTAGAAATTATTGAACTTATCCTTTCTTATAATCCTAACATTACGCATTTAGATCATATTGGATACTCTGTATTT
CATTATTGCGTAAGTGGTAAACTTAAAGCAAGATCTAAAATTAATATCTTAACAAAGTTAATTCAGAGTGCTGTAAATAG
TGGACAAACTGGTATGATTGCAAAAGCGGACAATTCGAGCGTATTCACCCCTCTCAGTATGGCAATTAACTATAATAAAG
ATTCTTTAGGGCTCGTGAGAGAGCTTTTGCCCTACTATTGTGATGAAATAAATCAAAAATCCTATTTATACATGGCAGTT
GAGTTGAAACAGGTTGAAGTTACTCGTTTATTACTTGAAGCAGGAGCTAAAATTAATTTTCAACCTCATTATTATGATAG
CGACCATGCTTTGTATTCAGCTGTTTCTGATGAAAATGTAGAGATGACAAAACTGCTGCTTGAATTTAACAGAGATTCCC
ATGAATTGAATATAAGACATGAGGATATGGACGGGAATGAAATGACTATCCTGCATATTGCCACCAAAAATCTGAATCTG
GAAATGATGAAACTTTTACTTTCTCAGGAAAAAATTGATCTTCATGTCCAAGATAATAAAGGTGATACGCCTTTGAATAT
TGCTATAGAATCGGGATATTATGAAGGTGCCAAGCTCTTGATTTATTCTGGAGCTCAAATAAAGTTGACTGAGAACTCAA
AGATTTTAAGTGAAGAGGGGCCTCATTTCGATAAGCTTAGGCATCATTTATTATATTTATTCATAAAGAATAAAGATTTG
GATTCCCTTCAATTAATTCTTAATAGCCCTTTCGACCTCCAGCTCACAACAGCACATGAAGAATTTGGTAAATCTCCCAT
TATGTATGCAAAAGAAATTGATCCTAACATAATGCAAATGATTTACAGACTAACTTTGAATAAATCAAATAGGAATGGAA
ATTATTCGAATTAG

Upstream 100 bases:

>100_bases
TTGATTTGAATTTGAAATGCCCTGACTTGATTCTTTTAACCTAGCACTGTAAGGTTAAAAGTGAAAATTTTTTATTAAAA
GCTCTAACTAGGAAATAAAA

Downstream 100 bases:

>100_bases
GAAACTGTCATTGCATGAGATGCATTTGCTTATTTTGCTTGATCATTGCAAAAGAACTGATAGCTTCAATGAAGCTATCT
ACTCCTGAATATATTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MIRNETIRFRAQNTLSEASNISDNLCGVLVPVEIVTHIFTFLTENSKNLLNLRSVCWRFKAIIETNGNCKRFFNISTSRD
LTFQNSSKISNYISKFLLHLTQYLTSKLGVNKLLVCPSFKDRFAITILNIFLQKVLRNSISLADKQALIEKIEHLKTRLH
ITIEPNTISSSFELQENQNQENCNPLLELFINFGIDPTAVNSQTGHSLLGEAAALQNTQGIKIILEALQSKGVSGEELIK
KLDTQDNWGKTALHHAMRSIDTPYYNRKKMKETENLLVEHGADSHIEDDDGGTPFNNFQISIEVKKLIKKDYNKLWIKEN
SEKESSQIKELYAAIKQKNPDEVKRLLETEKNLVNHPNLRRGGITPLIYALYYGDLEIIELILSYNPNITHLDHIGYSVF
HYCVSGKLKARSKINILTKLIQSAVNSGQTGMIAKADNSSVFTPLSMAINYNKDSLGLVRELLPYYCDEINQKSYLYMAV
ELKQVEVTRLLLEAGAKINFQPHYYDSDHALYSAVSDENVEMTKLLLEFNRDSHELNIRHEDMDGNEMTILHIATKNLNL
EMMKLLLSQEKIDLHVQDNKGDTPLNIAIESGYYEGAKLLIYSGAQIKLTENSKILSEEGPHFDKLRHHLLYLFIKNKDL
DSLQLILNSPFDLQLTTAHEEFGKSPIMYAKEIDPNIMQMIYRLTLNKSNRNGNYSN

Sequences:

>Translated_697_residues
MIRNETIRFRAQNTLSEASNISDNLCGVLVPVEIVTHIFTFLTENSKNLLNLRSVCWRFKAIIETNGNCKRFFNISTSRD
LTFQNSSKISNYISKFLLHLTQYLTSKLGVNKLLVCPSFKDRFAITILNIFLQKVLRNSISLADKQALIEKIEHLKTRLH
ITIEPNTISSSFELQENQNQENCNPLLELFINFGIDPTAVNSQTGHSLLGEAAALQNTQGIKIILEALQSKGVSGEELIK
KLDTQDNWGKTALHHAMRSIDTPYYNRKKMKETENLLVEHGADSHIEDDDGGTPFNNFQISIEVKKLIKKDYNKLWIKEN
SEKESSQIKELYAAIKQKNPDEVKRLLETEKNLVNHPNLRRGGITPLIYALYYGDLEIIELILSYNPNITHLDHIGYSVF
HYCVSGKLKARSKINILTKLIQSAVNSGQTGMIAKADNSSVFTPLSMAINYNKDSLGLVRELLPYYCDEINQKSYLYMAV
ELKQVEVTRLLLEAGAKINFQPHYYDSDHALYSAVSDENVEMTKLLLEFNRDSHELNIRHEDMDGNEMTILHIATKNLNL
EMMKLLLSQEKIDLHVQDNKGDTPLNIAIESGYYEGAKLLIYSGAQIKLTENSKILSEEGPHFDKLRHHLLYLFIKNKDL
DSLQLILNSPFDLQLTTAHEEFGKSPIMYAKEIDPNIMQMIYRLTLNKSNRNGNYSN
>Mature_697_residues
MIRNETIRFRAQNTLSEASNISDNLCGVLVPVEIVTHIFTFLTENSKNLLNLRSVCWRFKAIIETNGNCKRFFNISTSRD
LTFQNSSKISNYISKFLLHLTQYLTSKLGVNKLLVCPSFKDRFAITILNIFLQKVLRNSISLADKQALIEKIEHLKTRLH
ITIEPNTISSSFELQENQNQENCNPLLELFINFGIDPTAVNSQTGHSLLGEAAALQNTQGIKIILEALQSKGVSGEELIK
KLDTQDNWGKTALHHAMRSIDTPYYNRKKMKETENLLVEHGADSHIEDDDGGTPFNNFQISIEVKKLIKKDYNKLWIKEN
SEKESSQIKELYAAIKQKNPDEVKRLLETEKNLVNHPNLRRGGITPLIYALYYGDLEIIELILSYNPNITHLDHIGYSVF
HYCVSGKLKARSKINILTKLIQSAVNSGQTGMIAKADNSSVFTPLSMAINYNKDSLGLVRELLPYYCDEINQKSYLYMAV
ELKQVEVTRLLLEAGAKINFQPHYYDSDHALYSAVSDENVEMTKLLLEFNRDSHELNIRHEDMDGNEMTILHIATKNLNL
EMMKLLLSQEKIDLHVQDNKGDTPLNIAIESGYYEGAKLLIYSGAQIKLTENSKILSEEGPHFDKLRHHLLYLFIKNKDL
DSLQLILNSPFDLQLTTAHEEFGKSPIMYAKEIDPNIMQMIYRLTLNKSNRNGNYSN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI37620163, Length=374, Percent_Identity=25.1336898395722, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI46519147, Length=374, Percent_Identity=25.1336898395722, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI46519151, Length=304, Percent_Identity=25.6578947368421, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI46519154, Length=304, Percent_Identity=25.6578947368421, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI38683816, Length=371, Percent_Identity=24.2587601078167, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI38683807, Length=371, Percent_Identity=24.2587601078167, Blast_Score=70, Evalue=9e-12,
Organism=Homo sapiens, GI156142197, Length=145, Percent_Identity=31.7241379310345, Blast_Score=70, Evalue=9e-12,
Organism=Homo sapiens, GI156142199, Length=145, Percent_Identity=31.7241379310345, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI30348954, Length=287, Percent_Identity=25.4355400696864, Blast_Score=67, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71981414, Length=433, Percent_Identity=23.3256351039261, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 79609; Mature: 79609

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNETIRFRAQNTLSEASNISDNLCGVLVPVEIVTHIFTFLTENSKNLLNLRSVCWRFK
CCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AIIETNGNCKRFFNISTSRDLTFQNSSKISNYISKFLLHLTQYLTSKLGVNKLLVCPSFK
HHHCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
DRFAITILNIFLQKVLRNSISLADKQALIEKIEHLKTRLHITIEPNTISSSFELQENQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCC
ENCNPLLELFINFGIDPTAVNSQTGHSLLGEAAALQNTQGIKIILEALQSKGVSGEELIK
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHH
KLDTQDNWGKTALHHAMRSIDTPYYNRKKMKETENLLVEHGADSHIEDDDGGTPFNNFQI
HHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
SIEVKKLIKKDYNKLWIKENSEKESSQIKELYAAIKQKNPDEVKRLLETEKNLVNHPNLR
EEEHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
RGGITPLIYALYYGDLEIIELILSYNPNITHLDHIGYSVFHYCVSGKLKARSKINILTKL
CCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IQSAVNSGQTGMIAKADNSSVFTPLSMAINYNKDSLGLVRELLPYYCDEINQKSYLYMAV
HHHHHCCCCCCEEEECCCCCEECEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
ELKQVEVTRLLLEAGAKINFQPHYYDSDHALYSAVSDENVEMTKLLLEFNRDSHELNIRH
EEHHHHHHHHHHHCCCEEECCCCEECCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEE
EDMDGNEMTILHIATKNLNLEMMKLLLSQEKIDLHVQDNKGDTPLNIAIESGYYEGAKLL
CCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE
IYSGAQIKLTENSKILSEEGPHFDKLRHHLLYLFIKNKDLDSLQLILNSPFDLQLTTAHE
EEECCEEEECCCCCCCCCCCCCHHHHHHHEEEEEEECCCCCHHHHHHCCCCCEEEEECHH
EFGKSPIMYAKEIDPNIMQMIYRLTLNKSNRNGNYSN
HHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIRNETIRFRAQNTLSEASNISDNLCGVLVPVEIVTHIFTFLTENSKNLLNLRSVCWRFK
CCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AIIETNGNCKRFFNISTSRDLTFQNSSKISNYISKFLLHLTQYLTSKLGVNKLLVCPSFK
HHHCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
DRFAITILNIFLQKVLRNSISLADKQALIEKIEHLKTRLHITIEPNTISSSFELQENQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEECCCCCC
ENCNPLLELFINFGIDPTAVNSQTGHSLLGEAAALQNTQGIKIILEALQSKGVSGEELIK
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHH
KLDTQDNWGKTALHHAMRSIDTPYYNRKKMKETENLLVEHGADSHIEDDDGGTPFNNFQI
HHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
SIEVKKLIKKDYNKLWIKENSEKESSQIKELYAAIKQKNPDEVKRLLETEKNLVNHPNLR
EEEHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
RGGITPLIYALYYGDLEIIELILSYNPNITHLDHIGYSVFHYCVSGKLKARSKINILTKL
CCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IQSAVNSGQTGMIAKADNSSVFTPLSMAINYNKDSLGLVRELLPYYCDEINQKSYLYMAV
HHHHHCCCCCCEEEECCCCCEECEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
ELKQVEVTRLLLEAGAKINFQPHYYDSDHALYSAVSDENVEMTKLLLEFNRDSHELNIRH
EEHHHHHHHHHHHCCCEEECCCCEECCCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEE
EDMDGNEMTILHIATKNLNLEMMKLLLSQEKIDLHVQDNKGDTPLNIAIESGYYEGAKLL
CCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE
IYSGAQIKLTENSKILSEEGPHFDKLRHHLLYLFIKNKDLDSLQLILNSPFDLQLTTAHE
EEECCEEEECCCCCCCCCCCCCHHHHHHHEEEEEEECCCCCHHHHHHCCCCCEEEEECHH
EFGKSPIMYAKEIDPNIMQMIYRLTLNKSNRNGNYSN
HHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA