Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446400
Identifier: 46446400
GI number: 46446400
Start: 945656
End: 947563
Strand: Direct
Name: 46446400
Synonym: pc0766
Alternate gene names: NA
Gene position: 945656-947563 (Clockwise)
Preceding gene: 46446399
Following gene: 46446402
Centisome position: 39.17
GC content: 32.65
Gene sequence:
>1908_bases ATGAAAAATAATTATCGGGAAATTATTTTACATGGATTAACAAAAGTGCTGCCCGAAGATTTTTTTGAATACAAAGAAAC GGAGGAAGAAACAAGAGAGTATCAAAAGAATTTTTTTCGCCAATTAAATCCTTTGGTGACATGCTCTGATAATAAAAAAA TTCCGGGCTCCTTATCTTTTTTTGCTCTATCAAAATTCCGTTCTAATTCCTTTAAGTTCTTTTTCAAAATGATTAGCCAT TGGTTACTTCCAGATGAAAGTCTTAATGTCGTATTAGTTCATGCCTCAGATTTTCAATTAGCAGAGTTAAGTGGCGAAAT TTACACGATTTGCGAAATTGTAGTCAGTGTAAAATCGGTATCTGAATTTGAAGAGATATGCAAACATTTTCCCATCATCA GCACAGAAATAGCCTTGGGGATGCAATCAGAATTTTATGCGCAAAAAATATTAGAAATTAAAGGATTATCGGCTGACGAT AAAACAACCTCAATTCGTCGTATGATTGCTCATTTAGTTAAACGTTTTCCTCACATTTATGGGGCGGATGTGTTTACAGA AATGCAACATTTATTAGTTACATGTCGAGATGATTTTAAAGCAATCAGGCAACCTCGTCATTTAAGTCGGATCATAAGTA TTCAATATTTGTTTAGAAAATCTTTAAGGGAAGCAATTAAGAAAAGATCTCATCGCCGTCATTTAAGTTTAAAAATATTT CGCACTTTTCTCGTAACGCCGAAAGGTCGTAAAAGGGTGTTAGGATTACTTGTTGGCATTAATTTTTTGAGAGAACAAGA AACATTTGGTGAAAAACATTTACTAAAAGCTATTCAGCATTATTTACCATCTTCTCAATCAGTTGAGCAATCATTTTTTA TCAATAAACTTGGATCAGAAAATATTGGAATTTCCTATTTAGAAATAGAAAAAAAAGACGGCAGTGATTTTACAATTTTA GAAATTCGTAAACTGCGAAAAGAGCTTCCGCATAATTTAAAAAATCGCATTGAGCATAAACAACATCCGATTTTTATGCC ACGAAATGAAGAAGAAGTAATTCGGAATATGTTGATTTTGACAAATCAAATCAAATATTTACGAGACATTCCTCAAGTGT TTATTACGTTTGATGAACAAGCTTATTCGCACCTTTATTTTACTGTCATTTTAGCACGCGTATTAAAACCAGATTCAGAA AGTTTGACAAAGTTATTTCAATCTTATGAAATATCAGTTGAATACATCCCTGATAGAACAAAAATTACAGGGCACATACG TAAAAAACATCCTAAAGAAGCGTCGGTATTTCGTTTAAAAATTTTGAAAGATGCATTTTTGCGGGCTGATCACTCAATCG ATTTGTACAAAGCGAGGCAGGCTGTTGTAGGAGAGCTATCAAAGGTTGTTGGAGAAGTTAGAGACTATAATGGAGGGATG ATTTCCAAGCAACATGAGCAACTTGTATTGATTCATAAATTACTTAAAGATACAAAAGATTATGACGAGTTATTATTAGA AAACTTTTTCTATTCATTAGCCCCCGATATTATTCGTACTTTAATCGATCCGAAAGCTTTCAAAATTTTGTTTTTGATGT TACTAGAAGGTTTAAAAAGCTATAAACATGAAAGCTATTATCTGAAATTTTACCATGAACCTTCTAATGCTTTTGCAATG ATTATTTTAGAAGACCCCCTCGTAAAAGAAAGGATTTATAGAGCTGTTCACGATCTACATGTTCCTCATACAGAGCTTGC ATACGCTTATACAAAAACAAGCGGAAATAATTGTATTGGGTATATTTGTTGTTCGCAAGATTCTAACGTAAGAGAATGTT TTTTTCAGGCAATTAAACAGGAATTACAACACTGGGAAACGAACCAACCGAAATTTCTTATGCATTAG
Upstream 100 bases:
>100_bases TCGATAAATCCAGTTTATGAAATCTCTTAACAATAACATGAAAAAACGCTCTAAACTTACTATTACTCCTCTTTTTGAAT TTTCCGAAAATGATGAAATA
Downstream 100 bases:
>100_bases CTTATGATTCTTTCTTATTAGTAAGCAATAATGTTAAATTCCTATCCTTTAAATAGAAGCTGTCTTTCCGCAATAGTTTT TTTATATCAACTAATTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH
Sequences:
>Translated_635_residues MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH >Mature_635_residues MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSFFALSKFRSNSFKFFFKMISH WLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSVSEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADD KTTSIRRMIAHLVKRFPHIYGADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSENIGISYLEIEKKDGSDFTIL EIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLILTNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSE SLTKLFQSYEISVEYIPDRTKITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKSYKHESYYLKFYHEPSNAFAM IILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIGYICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74674; Mature: 74674
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSF CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH FALSKFRSNSFKFFFKMISHWLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHH SEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADDKTTSIRRMIAHLVKRFPHIY HHHHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC GADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSE HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC NIGISYLEIEKKDGSDFTILEIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLIL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSESLTKLFQSYEISVEYIPDRT HHHHHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCC KITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKS CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YKHESYYLKFYHEPSNAFAMIILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIG HCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCEEE YICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKNNYREIILHGLTKVLPEDFFEYKETEEETREYQKNFFRQLNPLVTCSDNKKIPGSLSF CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH FALSKFRSNSFKFFFKMISHWLLPDESLNVVLVHASDFQLAELSGEIYTICEIVVSVKSV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHH SEFEEICKHFPIISTEIALGMQSEFYAQKILEIKGLSADDKTTSIRRMIAHLVKRFPHIY HHHHHHHHHCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC GADVFTEMQHLLVTCRDDFKAIRQPRHLSRIISIQYLFRKSLREAIKKRSHRRHLSLKIF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTFLVTPKGRKRVLGLLVGINFLREQETFGEKHLLKAIQHYLPSSQSVEQSFFINKLGSE HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC NIGISYLEIEKKDGSDFTILEIRKLRKELPHNLKNRIEHKQHPIFMPRNEEEVIRNMLIL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TNQIKYLRDIPQVFITFDEQAYSHLYFTVILARVLKPDSESLTKLFQSYEISVEYIPDRT HHHHHHHHHCHHHEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCC KITGHIRKKHPKEASVFRLKILKDAFLRADHSIDLYKARQAVVGELSKVVGEVRDYNGGM HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ISKQHEQLVLIHKLLKDTKDYDELLLENFFYSLAPDIIRTLIDPKAFKILFLMLLEGLKS CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH YKHESYYLKFYHEPSNAFAMIILEDPLVKERIYRAVHDLHVPHTELAYAYTKTSGNNCIG HCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCEEE YICCSQDSNVRECFFQAIKQELQHWETNQPKFLMH EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA