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The map label for this gene is rmuC [H]

Identifier: 46446113

GI number: 46446113

Start: 615896

End: 617305

Strand: Direct

Name: rmuC [H]

Synonym: pc0479

Alternate gene names: 46446113

Gene position: 615896-617305 (Clockwise)

Preceding gene: 46446110

Following gene: 46446118

Centisome position: 25.51

GC content: 36.6

Gene sequence:

>1410_bases
ATGATAGAAATACGAGATTTAGGAATACTTTTTGGCTGTTTATGCGTTTGCCTCCTTTTTATTCTTTTTAAGTTATGGAA
TCTTTCAAAAATCAAACAAAAAATTTTACTAGAAAAGGAAATAATTCAAGCAGATTGGATGAAGGAGTGTGAAAGAAGGG
CGATTGCAGAGGAGAAAAATACACGATTACCCATTCTCGAAGAGCAATTGAGACAGGAGCGTATTGAAACTCAAAGATGG
ATCAATGAAAATTCTTTCCTAAAGACTCAAATTGCTGAAAAAGACACTGCCTTAAAAAAGCAAATTGAATATGAAAAAGA
AAAATTATTAATGCATCAACAAACTCAAGAACAGTTAACAGAGTCTTTCAAAGCTTTATCCGCAGATGCTTTAAAAAACA
ATATCCAATCTTTCCTTGATATTGCGACGGTCAAGTTTGAAAAACTGCAAGAAGGAGCAAAACATGACTTACAACTCAGA
CAAAAAGCTATTGATGATTTAGTCAAACCTATCCAAAGTTGTTTACAAACTGTTGATTTAAAAATGTCAGAGCTAGAAAA
AGCACGTCTAGTGGCTTATGCGAGTATGAGCGAACAAGTTCATACATTAGCGAAATCTCAAATACAATTACAAGTTGAAA
CCTCGAATTTAGTAAAGGCTTTAAGAGCCCCACATGTACGTGGAAGATGGGGAGAAATTCAACTTAAAAGAGTTGTTGAA
ATGGCGGGTATGATTGAACACTGCGACTTTGTTCAGCAAGAAACTGTTTTTTCCGAAGAAAAGCGATTTCGGCCTGATTT
AATTATTAAGCTTCCTAATGCGAAGCAAATTGTTGTAGATTCTAAAGCTCCACTTTATGCTTATCTTGAGTCTTTAGAAG
AAAAAGAAGAGGCGCAAAGACTTACAAAGTTAAAAGACCATGCAAGGCAAGTTCGTACGCATATCACACAATTAGCCACT
AAATCTTATTGGGACCAATTTCAACAAGCTCCCGAGTTTGTTGTTTTATTTCTCCCAGGCGAAACATTTTTCAGCGCAGC
ACTCGAGCAAGATCCAGAATTAATTGAATGGGGAGTCGAACAAAAAGTAATTTTAGCAACACCCACCACGTTAATTGCTC
TTTTACGCTCTGTTGCTTATGGCTGGCGTCAAGAATTAATTGCTGAAAATGCGCAGCAAATCAGCGAACTTGGAAAGACT
TTGCATGATCGTGTTCGCATCCTTGTGGAGCATTTTGATGAAATACGACGAGGGCTTGAGCGTGCTGTGGATGCTTATAA
TAAAACTGTAGGATCATTAGAAACTCGCGTGTTACCATCCGCTAGAAAATTTAAAGAACTAGGAGCATCCAGTGGAGAAG
ATATTCTTTTTTTAGAAACGATCGACTCCACAATAAGAAAATGTCATTAA

Upstream 100 bases:

>100_bases
TTCGATATTCCTTGTTGAATCCTTTCTGAGATCTACAACAAGTTACGATTTATTTGATAAAACTGATACACTATAAAAAA
AATTGACTGGATTAAAGAAT

Downstream 100 bases:

>100_bases
ACTGACTAGAGTGCTTAGTGTAATACTTAATGGGTAAATGTTTAAATTTAGAGTGCCAAAAAAAGCAAAATAAATGTCTA
TAAATGCAATTAAGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MIEIRDLGILFGCLCVCLLFILFKLWNLSKIKQKILLEKEIIQADWMKECERRAIAEEKNTRLPILEEQLRQERIETQRW
INENSFLKTQIAEKDTALKKQIEYEKEKLLMHQQTQEQLTESFKALSADALKNNIQSFLDIATVKFEKLQEGAKHDLQLR
QKAIDDLVKPIQSCLQTVDLKMSELEKARLVAYASMSEQVHTLAKSQIQLQVETSNLVKALRAPHVRGRWGEIQLKRVVE
MAGMIEHCDFVQQETVFSEEKRFRPDLIIKLPNAKQIVVDSKAPLYAYLESLEEKEEAQRLTKLKDHARQVRTHITQLAT
KSYWDQFQQAPEFVVLFLPGETFFSAALEQDPELIEWGVEQKVILATPTTLIALLRSVAYGWRQELIAENAQQISELGKT
LHDRVRILVEHFDEIRRGLERAVDAYNKTVGSLETRVLPSARKFKELGASSGEDILFLETIDSTIRKCH

Sequences:

>Translated_469_residues
MIEIRDLGILFGCLCVCLLFILFKLWNLSKIKQKILLEKEIIQADWMKECERRAIAEEKNTRLPILEEQLRQERIETQRW
INENSFLKTQIAEKDTALKKQIEYEKEKLLMHQQTQEQLTESFKALSADALKNNIQSFLDIATVKFEKLQEGAKHDLQLR
QKAIDDLVKPIQSCLQTVDLKMSELEKARLVAYASMSEQVHTLAKSQIQLQVETSNLVKALRAPHVRGRWGEIQLKRVVE
MAGMIEHCDFVQQETVFSEEKRFRPDLIIKLPNAKQIVVDSKAPLYAYLESLEEKEEAQRLTKLKDHARQVRTHITQLAT
KSYWDQFQQAPEFVVLFLPGETFFSAALEQDPELIEWGVEQKVILATPTTLIALLRSVAYGWRQELIAENAQQISELGKT
LHDRVRILVEHFDEIRRGLERAVDAYNKTVGSLETRVLPSARKFKELGASSGEDILFLETIDSTIRKCH
>Mature_469_residues
MIEIRDLGILFGCLCVCLLFILFKLWNLSKIKQKILLEKEIIQADWMKECERRAIAEEKNTRLPILEEQLRQERIETQRW
INENSFLKTQIAEKDTALKKQIEYEKEKLLMHQQTQEQLTESFKALSADALKNNIQSFLDIATVKFEKLQEGAKHDLQLR
QKAIDDLVKPIQSCLQTVDLKMSELEKARLVAYASMSEQVHTLAKSQIQLQVETSNLVKALRAPHVRGRWGEIQLKRVVE
MAGMIEHCDFVQQETVFSEEKRFRPDLIIKLPNAKQIVVDSKAPLYAYLESLEEKEEAQRLTKLKDHARQVRTHITQLAT
KSYWDQFQQAPEFVVLFLPGETFFSAALEQDPELIEWGVEQKVILATPTTLIALLRSVAYGWRQELIAENAQQISELGKT
LHDRVRILVEHFDEIRRGLERAVDAYNKTVGSLETRVLPSARKFKELGASSGEDILFLETIDSTIRKCH

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=321, Percent_Identity=30.2180685358255, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54321; Mature: 54321

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA