Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is phoH [H]
Identifier: 46446118
GI number: 46446118
Start: 622393
End: 623694
Strand: Direct
Name: phoH [H]
Synonym: pc0484
Alternate gene names: 46446118
Gene position: 622393-623694 (Clockwise)
Preceding gene: 46446113
Following gene: 46446119
Centisome position: 25.78
GC content: 35.71
Gene sequence:
>1302_bases ATGAAATATAAGACTTTTGTAATTGATACAAACGTATTTTTAATTGATCCTACTGCTTTAATGAAATTTCCTCGGCATGA TGTTGTCATCCCAGTTGCGGTTCTTGAAGAGTTGGACAAATTTAAGCGAATGCCAAACGAATTAGGAAAGAATGCTCGGG AAACGATTCGTTTCTTAGACTCGCTAAAAAATGTTGGGACCGGCAATTTGCAATCAGGTGTTAAGCTTGATAACGGAGCC ACCGTTAAAATTCAGTTAGAAGTTAAAACAGACTACAAATATAACTTTGAACTGACTATTAATGACAATCGTATTTTGAT GGCAGCTTATCTTTTATTAGAGCGAGGAGAAAAAGTTGTTTTTGTTTCTAAAGATTTTGCAGCACGGGTAAAGGCCGAAG CTTTAGGGATTGAAGCGGAAGATTATGAAAATTTCAAATATTCTTATGAAGCTGTTTATCGTGGTATTCATCGTATTGAT AATATGCCAAAACATGAAATTGATACGTTTTATAAAGATGGTAAACTAACTGTTCCAAACCTAAAAGCGCATTTCAATGA ATATTTTGTGATGACATCTGCTGAAAATACTTCAGCAATAGGGAAGTATGACCCTTCTCATCTAAGATTAGAAGCTCTTT TAAAGACAAATCAATTGTGGGGTATTAAACCTCGTAACGTTGAACAACGTTGTGCAATCGATTTATTACTAAGAGATGAT ATTAAATTAGTCACTCTCATGGGTCCAGCTGGAACGGGGAAAACTATTTTAGCTTTGGCGTGTGGACTTCGAAAAGTTTT TGATGAAGGTGTTTATTCACGTATACTTGTAACGCGTCCAATAGTTCCTTTAGGCCGAGATATTGGTTACCTTCCGGGCA CAAAAGAAGAAAAACTTTTCCACTGGATGCAACCGATCTATGATAACTTAGAATATTTATGTGCGTCTACAGGAGGAGAG TCTAGTGAAACTCTTAAATGGGTTTTAGATAGTAAAAAAATTGAAATGGAAGCTGTCACATACATTCGAGGTAGAACACT ACCAAAAATGTATATGATTATTGATGAAGCTCAAAACCTTACTCCGCATGAAATCAAGACAATTATTTCTCGGGCTGGAG AAGGAACTAAAGTTGTTTTAGCTGGAGATCCAACTCAAATTGACAATCCTTATTTAGATAAAGATTCTAATGGCTTGACC TTTACAGTCGGTAAGTTCTTAGATCAAAAAATTTACGGTCATATTTTCTTAGATATAACCGAACGTTCTGAATTGGCTGC CATTGCTGCGGATGTGATGTAA
Upstream 100 bases:
>100_bases TGCTTAAAATTTAACTGAGGTTAATAAATATTAAATTTTTTTCTTGTCTCAGATCAAAGAGCTGAATATGATGCACTTTT AATTTTTAGGAGTAAAAAAA
Downstream 100 bases:
>100_bases TAAGAGAGCTTTTTTAATAAATTCTCTTTTTACTGGGAAACATACCCCCGATTTTAGAAAATATTCTAGGAAAAATTGGA AGCTTTTTGTAAATCAGGAA
Product: putative phosphate starvation-inducible
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKYKTFVIDTNVFLIDPTALMKFPRHDVVIPVAVLEELDKFKRMPNELGKNARETIRFLDSLKNVGTGNLQSGVKLDNGA TVKIQLEVKTDYKYNFELTINDNRILMAAYLLLERGEKVVFVSKDFAARVKAEALGIEAEDYENFKYSYEAVYRGIHRID NMPKHEIDTFYKDGKLTVPNLKAHFNEYFVMTSAENTSAIGKYDPSHLRLEALLKTNQLWGIKPRNVEQRCAIDLLLRDD IKLVTLMGPAGTGKTILALACGLRKVFDEGVYSRILVTRPIVPLGRDIGYLPGTKEEKLFHWMQPIYDNLEYLCASTGGE SSETLKWVLDSKKIEMEAVTYIRGRTLPKMYMIIDEAQNLTPHEIKTIISRAGEGTKVVLAGDPTQIDNPYLDKDSNGLT FTVGKFLDQKIYGHIFLDITERSELAAIAADVM
Sequences:
>Translated_433_residues MKYKTFVIDTNVFLIDPTALMKFPRHDVVIPVAVLEELDKFKRMPNELGKNARETIRFLDSLKNVGTGNLQSGVKLDNGA TVKIQLEVKTDYKYNFELTINDNRILMAAYLLLERGEKVVFVSKDFAARVKAEALGIEAEDYENFKYSYEAVYRGIHRID NMPKHEIDTFYKDGKLTVPNLKAHFNEYFVMTSAENTSAIGKYDPSHLRLEALLKTNQLWGIKPRNVEQRCAIDLLLRDD IKLVTLMGPAGTGKTILALACGLRKVFDEGVYSRILVTRPIVPLGRDIGYLPGTKEEKLFHWMQPIYDNLEYLCASTGGE SSETLKWVLDSKKIEMEAVTYIRGRTLPKMYMIIDEAQNLTPHEIKTIISRAGEGTKVVLAGDPTQIDNPYLDKDSNGLT FTVGKFLDQKIYGHIFLDITERSELAAIAADVM >Mature_433_residues MKYKTFVIDTNVFLIDPTALMKFPRHDVVIPVAVLEELDKFKRMPNELGKNARETIRFLDSLKNVGTGNLQSGVKLDNGA TVKIQLEVKTDYKYNFELTINDNRILMAAYLLLERGEKVVFVSKDFAARVKAEALGIEAEDYENFKYSYEAVYRGIHRID NMPKHEIDTFYKDGKLTVPNLKAHFNEYFVMTSAENTSAIGKYDPSHLRLEALLKTNQLWGIKPRNVEQRCAIDLLLRDD IKLVTLMGPAGTGKTILALACGLRKVFDEGVYSRILVTRPIVPLGRDIGYLPGTKEEKLFHWMQPIYDNLEYLCASTGGE SSETLKWVLDSKKIEMEAVTYIRGRTLPKMYMIIDEAQNLTPHEIKTIISRAGEGTKVVLAGDPTQIDNPYLDKDSNGLT FTVGKFLDQKIYGHIFLDITERSELAAIAADVM
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=169, Percent_Identity=39.6449704142012, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1787257, Length=175, Percent_Identity=33.7142857142857, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49064; Mature: 49064
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKTFVIDTNVFLIDPTALMKFPRHDVVIPVAVLEELDKFKRMPNELGKNARETIRFLD CCEEEEEEECEEEEECCHHHHHCCCCCEEEHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH SLKNVGTGNLQSGVKLDNGATVKIQLEVKTDYKYNFELTINDNRILMAAYLLLERGEKVV HHHCCCCCCCCCCEEECCCCEEEEEEEEEECEEEEEEEEECCCEEHHHHHHHHHCCCEEE FVSKDFAARVKAEALGIEAEDYENFKYSYEAVYRGIHRIDNMPKHEIDTFYKDGKLTVPN EEECCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCC LKAHFNEYFVMTSAENTSAIGKYDPSHLRLEALLKTNQLWGIKPRNVEQRCAIDLLLRDD HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEECC IKLVTLMGPAGTGKTILALACGLRKVFDEGVYSRILVTRPIVPLGRDIGYLPGTKEEKLF EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH HWMQPIYDNLEYLCASTGGESSETLKWVLDSKKIEMEAVTYIRGRTLPKMYMIIDEAQNL HHHHHHHHCHHEEEECCCCCCCHHHHEEECCCCEEEHHHHHHCCCCCCEEEEEEECCCCC TPHEIKTIISRAGEGTKVVLAGDPTQIDNPYLDKDSNGLTFTVGKFLDQKIYGHIFLDIT CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHCEEEEEEEEE ERSELAAIAADVM CCCHHHHHHHHCC >Mature Secondary Structure MKYKTFVIDTNVFLIDPTALMKFPRHDVVIPVAVLEELDKFKRMPNELGKNARETIRFLD CCEEEEEEECEEEEECCHHHHHCCCCCEEEHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH SLKNVGTGNLQSGVKLDNGATVKIQLEVKTDYKYNFELTINDNRILMAAYLLLERGEKVV HHHCCCCCCCCCCEEECCCCEEEEEEEEEECEEEEEEEEECCCEEHHHHHHHHHCCCEEE FVSKDFAARVKAEALGIEAEDYENFKYSYEAVYRGIHRIDNMPKHEIDTFYKDGKLTVPN EEECCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCC LKAHFNEYFVMTSAENTSAIGKYDPSHLRLEALLKTNQLWGIKPRNVEQRCAIDLLLRDD HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEECC IKLVTLMGPAGTGKTILALACGLRKVFDEGVYSRILVTRPIVPLGRDIGYLPGTKEEKLF EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH HWMQPIYDNLEYLCASTGGESSETLKWVLDSKKIEMEAVTYIRGRTLPKMYMIIDEAQNL HHHHHHHHCHHEEEECCCCCCCHHHHEEECCCCEEEHHHHHHCCCCCCEEEEEEECCCCC TPHEIKTIISRAGEGTKVVLAGDPTQIDNPYLDKDSNGLTFTVGKFLDQKIYGHIFLDIT CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHCEEEEEEEEE ERSELAAIAADVM CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]