Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659217
Identifier: 45659217
GI number: 45659217
Start: 4168449
End: 4169264
Strand: Reverse
Name: 45659217
Synonym: LIC13400
Alternate gene names: NA
Gene position: 4169264-4168449 (Counterclockwise)
Preceding gene: 45659218
Following gene: 45659216
Centisome position: 97.48
GC content: 53.43
Gene sequence:
>816_bases GTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGT GAGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGG GTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGT AACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAA CTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACT CAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTCTACGGATCGCAGCGTGGGTAACTCA GCAACACTGCTCTTTATGGATCGCAGCGTGGGTAACTCAGCAACACTGCTCTTTATGGATCGCAGCGTGGGTAACTCAGC AACGCTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACGCTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAA CGCTGCTCTCTACGGATCGCAGCGTGGGTAACTCAGCAACGCTGCTCTCTACGGATCGCAGCGTTAGGGATCGATGCGGA GTCAACAAATTGTTTCAACAGTTAAATTTTGTTTTATTTTTGGTCTTCAATTTGTTGACTAAAGCTGAGAGCCCGGCCTG CTTTATTTTACAGTAA
Upstream 100 bases:
>100_bases TTATTTAGTGGTTCTCTTTATGGAATCAAATTTTTATTTTAAAATAAAATAATATATTTATATATTTTTTAACGATTAAG TCGGAAAGGATTACCGCGCG
Downstream 100 bases:
>100_bases GTTTTTGTTTTATAATCAATTCAAAAGCAGGAAACGCCCTAATCTTTTTTCAAATTCGAAATCATTAGAATTGTTTTCGT AAAAGCAGTTCCGATTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MGNSATLLSTDRSVGNSATLLSTDRSVSNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVG NSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNS ATLLFMDRSVGNSATLLFMDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVRDRCG VNKLFQQLNFVLFLVFNLLTKAESPACFILQ
Sequences:
>Translated_271_residues MGNSATLLSTDRSVGNSATLLSTDRSVSNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVG NSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNS ATLLFMDRSVGNSATLLFMDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVRDRCG VNKLFQQLNFVLFLVFNLLTKAESPACFILQ >Mature_270_residues GNSATLLSTDRSVGNSATLLSTDRSVSNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGN SATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSA TLLFMDRSVGNSATLLFMDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVRDRCGV NKLFQQLNFVLFLVFNLLTKAESPACFILQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI56311430, Length=237, Percent_Identity=26.5822784810127, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27972; Mature: 27841
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSATLLSTDRSVGNSATLLSTDRSVSNSATLLSTDRSVGNSATLLSTDRSVGNSATLL CCCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEE STDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGN ECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC SATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLFMDRSVGNSATLLFMD CEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEE RSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVRDRCG CCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCC VNKLFQQLNFVLFLVFNLLTKAESPACFILQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure GNSATLLSTDRSVGNSATLLSTDRSVSNSATLLSTDRSVGNSATLLSTDRSVGNSATLL CCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEE STDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGN ECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCC SATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLFMDRSVGNSATLLFMD CEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEE RSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVGNSATLLSTDRSVRDRCG CCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCC VNKLFQQLNFVLFLVFNLLTKAESPACFILQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA