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The map label for this gene is mcp4 [H]

Identifier: 45659218

GI number: 45659218

Start: 4169584

End: 4171152

Strand: Reverse

Name: mcp4 [H]

Synonym: LIC13401

Alternate gene names: 45659218

Gene position: 4171152-4169584 (Counterclockwise)

Preceding gene: 45659219

Following gene: 45659217

Centisome position: 97.52

GC content: 34.1

Gene sequence:

>1569_bases
ATGTCCAAACAATCTATAGAATCCATTCGCAAGAAGGGAGAGGCGCTTACATATTATTCTAGAATGACAATTATGGTTAT
GGTGCTGATTTCTTTAGCCGCGAGTTTTAAAACACTTCAAATTCAGATTAAAATCATTCATTCTTCCGCTGCGTTTTTTA
TGTTTGTTTACACGCTTTTCGGTTTTATTCTCTATAAAAAATATGAAATTAAACAATGGGTTCATAATCTATTTATTATA
TTTGATTCTCTTATATTGAGTGTGACGATTTTTTTGGATAGTATGGTTTCTCCGGAACTGATTTCCCCCGTTCTCAAAAA
CGCGATTCTTTATTCAGTATATTATTTTATTATTGCTTATTCCGGTCTTTTAGGTAGGCCAAAGTTTGTACTAATTACAG
GTATGTTTTGTTATTTTGGTTATTCGATTGCATTGACTAATGCAGCCTTTCACGGTCTTAGATTTTCGGAAGACAATACG
ATTAATATGAAGCCTGGTTATGTTAAACTTAGCGCAGAGATCACGAAAATCTTCTTTATGGCAGGTGTAAGTTTAATCCT
TTATCGATTAATGAATTTATTTGACGAGTTATATCAAGAAGCTTCCTCTTATTTTCAAGAGAATAAGGATTTTTTAAATA
AGTTGGAAAATAATAGAAAGATAATTCATTCTTCGGCGGAAACTTTGGAGCTTTCGGTAACGAACTTTTCGGAATTTACA
AGTTTAACTAGCGAAAAGATGGAATCGCAGGCCGCTTCTTTAGAAGAGGTAAACGCAGTAATAACTTCTTTATCTAAATC
GTCCGAAAAAAACGCAGACTCGATTCGAATTCAAAACGAAAATTTAATCGAACTCAATCAAAAAGCCCAAACCCTTTTAG
AAGTGATCGCTGAAATCTCAGATCATTCTAAAGGTTTGGACGTTAATGCGAAAGAAAGTAAAACCGAAATGAAAGTCGTA
AAGGAATCTGTGGAAAAAACTGGCGAGTTCTTAAAAAACATTTCGAATTCATTTCAACGTGTGGATGAGATCAATCGTAT
TTTAGGAGAAATTGCAGATAAAACTAATCTTCTTTCTTTGAACGCTTCTATCGAAGCGGCTCGTGCTGGTTCTGCAGGTC
GTGGATTTGCTGTAGTTGCTCAAGAGGTTAGTAAACTTGCAGAATTTACGGCTACAAATGCAAAGATGATTGCAAAAGTG
GTTCAAGAATCTCTCGAATTTATTGAAGAAGCAAATACCGCTTCTCAAGGTACAGGGCACTTGACTGAGAATCAAAGTAT
TAAAGTCAATCTTACCGTTTCAAAAATAGAAGAGATGAGTCGTTTGTATGAACGTGGAACTACGATCGTTAATGATTTTG
TTAAAAATTTAGAAAGAGTTAAAAAGTTATCGGACAACTTATTTCATTCTACAGAAGAACAGATGACTGCTCAAAAAGAA
ATGATGAAGGCTATGTTTGAACTTGAAAAAGAAGTCAATGAGATTACTCAGGAATCTGGAAGAATTCAAGACGGGGTTTT
ACAGATTAAAACCCAATCTAGAGATTTAAAAGCTTTGAGTATAGTTTAA

Upstream 100 bases:

>100_bases
TCTAAAATTGAAATCTGTCGTTTTATAATACGGATACTGGATTTCCAAATAGGTTTTCACTTTTCATTTACTGAAATTAA
ATTATAAAAACGTTTGGCTT

Downstream 100 bases:

>100_bases
TTCTTTTTTTACGGATACAACATTTTTTACCAAAACACGTACGTAGATAACAATATGTTATGGGTTTGTTTCAAAAGCAA
TTGATTCTGAAAATGTACAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSKQSIESIRKKGEALTYYSRMTIMVMVLISLAASFKTLQIQIKIIHSSAAFFMFVYTLFGFILYKKYEIKQWVHNLFII
FDSLILSVTIFLDSMVSPELISPVLKNAILYSVYYFIIAYSGLLGRPKFVLITGMFCYFGYSIALTNAAFHGLRFSEDNT
INMKPGYVKLSAEITKIFFMAGVSLILYRLMNLFDELYQEASSYFQENKDFLNKLENNRKIIHSSAETLELSVTNFSEFT
SLTSEKMESQAASLEEVNAVITSLSKSSEKNADSIRIQNENLIELNQKAQTLLEVIAEISDHSKGLDVNAKESKTEMKVV
KESVEKTGEFLKNISNSFQRVDEINRILGEIADKTNLLSLNASIEAARAGSAGRGFAVVAQEVSKLAEFTATNAKMIAKV
VQESLEFIEEANTASQGTGHLTENQSIKVNLTVSKIEEMSRLYERGTTIVNDFVKNLERVKKLSDNLFHSTEEQMTAQKE
MMKAMFELEKEVNEITQESGRIQDGVLQIKTQSRDLKALSIV

Sequences:

>Translated_522_residues
MSKQSIESIRKKGEALTYYSRMTIMVMVLISLAASFKTLQIQIKIIHSSAAFFMFVYTLFGFILYKKYEIKQWVHNLFII
FDSLILSVTIFLDSMVSPELISPVLKNAILYSVYYFIIAYSGLLGRPKFVLITGMFCYFGYSIALTNAAFHGLRFSEDNT
INMKPGYVKLSAEITKIFFMAGVSLILYRLMNLFDELYQEASSYFQENKDFLNKLENNRKIIHSSAETLELSVTNFSEFT
SLTSEKMESQAASLEEVNAVITSLSKSSEKNADSIRIQNENLIELNQKAQTLLEVIAEISDHSKGLDVNAKESKTEMKVV
KESVEKTGEFLKNISNSFQRVDEINRILGEIADKTNLLSLNASIEAARAGSAGRGFAVVAQEVSKLAEFTATNAKMIAKV
VQESLEFIEEANTASQGTGHLTENQSIKVNLTVSKIEEMSRLYERGTTIVNDFVKNLERVKKLSDNLFHSTEEQMTAQKE
MMKAMFELEKEVNEITQESGRIQDGVLQIKTQSRDLKALSIV
>Mature_521_residues
SKQSIESIRKKGEALTYYSRMTIMVMVLISLAASFKTLQIQIKIIHSSAAFFMFVYTLFGFILYKKYEIKQWVHNLFIIF
DSLILSVTIFLDSMVSPELISPVLKNAILYSVYYFIIAYSGLLGRPKFVLITGMFCYFGYSIALTNAAFHGLRFSEDNTI
NMKPGYVKLSAEITKIFFMAGVSLILYRLMNLFDELYQEASSYFQENKDFLNKLENNRKIIHSSAETLELSVTNFSEFTS
LTSEKMESQAASLEEVNAVITSLSKSSEKNADSIRIQNENLIELNQKAQTLLEVIAEISDHSKGLDVNAKESKTEMKVVK
ESVEKTGEFLKNISNSFQRVDEINRILGEIADKTNLLSLNASIEAARAGSAGRGFAVVAQEVSKLAEFTATNAKMIAKVV
QESLEFIEEANTASQGTGHLTENQSIKVNLTVSKIEEMSRLYERGTTIVNDFVKNLERVKKLSDNLFHSTEEQMTAQKEM
MKAMFELEKEVNEITQESGRIQDGVLQIKTQSRDLKALSIV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=295, Percent_Identity=28.135593220339, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788195, Length=277, Percent_Identity=27.7978339350181, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788194, Length=259, Percent_Identity=25.0965250965251, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787690, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1789453, Length=239, Percent_Identity=27.6150627615063, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58902; Mature: 58770

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQSIESIRKKGEALTYYSRMTIMVMVLISLAASFKTLQIQIKIIHSSAAFFMFVYTLF
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECHHHHHHHHHHHH
GFILYKKYEIKQWVHNLFIIFDSLILSVTIFLDSMVSPELISPVLKNAILYSVYYFIIAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SGLLGRPKFVLITGMFCYFGYSIALTNAAFHGLRFSEDNTINMKPGYVKLSAEITKIFFM
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCEEEEHHHHHHHHHH
AGVSLILYRLMNLFDELYQEASSYFQENKDFLNKLENNRKIIHSSAETLELSVTNFSEFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCHHHHH
SLTSEKMESQAASLEEVNAVITSLSKSSEKNADSIRIQNENLIELNQKAQTLLEVIAEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
DHSKGLDVNAKESKTEMKVVKESVEKTGEFLKNISNSFQRVDEINRILGEIADKTNLLSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NASIEAARAGSAGRGFAVVAQEVSKLAEFTATNAKMIAKVVQESLEFIEEANTASQGTGH
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LTENQSIKVNLTVSKIEEMSRLYERGTTIVNDFVKNLERVKKLSDNLFHSTEEQMTAQKE
CCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
MMKAMFELEKEVNEITQESGRIQDGVLQIKTQSRDLKALSIV
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCC
>Mature Secondary Structure 
SKQSIESIRKKGEALTYYSRMTIMVMVLISLAASFKTLQIQIKIIHSSAAFFMFVYTLF
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECHHHHHHHHHHHH
GFILYKKYEIKQWVHNLFIIFDSLILSVTIFLDSMVSPELISPVLKNAILYSVYYFIIAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SGLLGRPKFVLITGMFCYFGYSIALTNAAFHGLRFSEDNTINMKPGYVKLSAEITKIFFM
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCEEEEHHHHHHHHHH
AGVSLILYRLMNLFDELYQEASSYFQENKDFLNKLENNRKIIHSSAETLELSVTNFSEFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCHHHHH
SLTSEKMESQAASLEEVNAVITSLSKSSEKNADSIRIQNENLIELNQKAQTLLEVIAEIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
DHSKGLDVNAKESKTEMKVVKESVEKTGEFLKNISNSFQRVDEINRILGEIADKTNLLSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NASIEAARAGSAGRGFAVVAQEVSKLAEFTATNAKMIAKVVQESLEFIEEANTASQGTGH
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LTENQSIKVNLTVSKIEEMSRLYERGTTIVNDFVKNLERVKKLSDNLFHSTEEQMTAQKE
CCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
MMKAMFELEKEVNEITQESGRIQDGVLQIKTQSRDLKALSIV
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]