Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is impL63
Identifier: 45657714
GI number: 45657714
Start: 2244825
End: 2246468
Strand: Reverse
Name: impL63
Synonym: LIC11851
Alternate gene names: NA
Gene position: 2246468-2244825 (Counterclockwise)
Preceding gene: 45657718
Following gene: 45657709
Centisome position: 52.52
GC content: 34.79
Gene sequence:
>1644_bases ATGACCAAACGTTCTAAATATCTTTTCGTATTTTTATTTCTTTTCTTTGGAATCCAAACTGGAATTCAAGCGCAACTTTG GATTCCACCGGGTAGACAGTATATGCATCCCACAGAGCCGTTTACTTATGATCTTGGGATCAATAAATATCAGAAAGATT ATTATCTCTATGTAGCACCTACCGTCAATTTGAACTTCGGAGGTGATTTTGGAGCTTCGTTGACTTTACCTTTAAATTTT TTGATCTACGATACGGAACCAAAACAAGAAAATTCTAAGATAGGGAAACTTAGGTCTTTCGATTACAATGAAAAAAGCGA TTATCTTAGATTGATCAATAATATTTGGTTTGGTCAGTATGGAAAATACACTCCCGGAGAAATTACATATTCTGCATATT TAGGAAAACTATTCGATGGTTATATAGGTCACGGAACGATCGTAAATCGATACGTAAACAATCAACGTTTAGATGTGTAT AACGTAGGTCTTCAAGCTGATATAAACAGTGATTTTGGAGGGGTACAGGTATTTTCCAATTCAATTTATACAAGAGAAGT CAGTTCAGCAAGGGTTTATATCCGACCCTTTGCCGTTGGATATAAACTTTTTGATATTGTTACCGGCAGGTCCAAATTTT TGACGATGATGACAATTGCACAAGGAAACGTAGCCGATGAAGCCGGGAGAAGAAAAGTTTATGAGGAAGTAGGGGCGGAA GAAAAGGAATCTTATCGTGCTTTGATTGAAGATCAGAAGACACAGCAAAAAAAAGAAGAAATGATTCCTGCGGATAAAAA ACCGGAAAAACCTCAAAATTTGAAAGAGATATTTAATCAAGATAATTGGGTCAACCGGTTTGCAATTGGTTATACAACCG CGTTTGATACTAAAGCTCCTTCGGAACTTAAGTTTGATACTACAGGAAAGCTAAAAGTAGATGAGAATGATAATCCACTC GTCAAGTCTACGGAAAGACTTTCGATTACTGGTTTCGATTTTGAATACAAATTACTTAGTGCGAAATATATAGAGCTGAC TCCTTACTATGACATAAATAAAATCAGACAGATAGAAAACGCAAAAGGTACACATTATGGAGCAATACTTAGATTGGGTG GAAAGGACATTTATGTACAAATAAAACCTGAATATAGAAATATGACAGCAACATATATTCCTATGTATTTTGATAGTTTT TACGAATTAGAAAGATTTCAGAGTAATTTACAAAGTCATATTCCACAGACCAAATTAGAAGCCGCAAAATTAGCTGATCC AGATGGACCTAAGGTAAAGGGACATTTTACAACTGTATTATTCAATTTTTATAGATTTGCGATCGAATCAAACTATGAAA ACTATGCCGGACCGAATAACTCCAGAGTGTTTCTAGGAGTTTATATTCCGATTGGAAGTATGTTCCTCATTAATGGGTAT TATATGAAAAAAGCTTTTGATCAAAATAAAGAAGCTTTTAAATTAGATGATCGATCTCAAGGGGCTTTGGAATTGGCTAT CAATTTAGGTCTTATAACAATCAGACTTCAGAATATACGTAAATGGGTTTATGACACGGCTTCCAGTCAATACGAAGCTC AAGACGAACAGAAAATATTATTTTCCGGTGGTTTATCTTTTTAG
Upstream 100 bases:
>100_bases AAATTGATCTTCATTTCTTTCCGAAAATTAAGTAAGACTTTATTTGTAAGGAGAGTGTAGCGGGATTTTCTAAGGAATTT TCGGTTTAAATCAATCTGAC
Downstream 100 bases:
>100_bases AAAATTGTTTTTTCTTCAAGTCTTGCAAGTAAAAACGCAAAAGCTGTTTCGGTGCGAAGTATTCGATCGGAGAGATTTAG TTTTTTAAAACCAAAACGTT
Product: cytoplasmic membrane protein
Products: NA
Alternate protein names: Cytoplasmic Membrane Protein ImpL
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MTKRSKYLFVFLFLFFGIQTGIQAQLWIPPGRQYMHPTEPFTYDLGINKYQKDYYLYVAPTVNLNFGGDFGASLTLPLNF LIYDTEPKQENSKIGKLRSFDYNEKSDYLRLINNIWFGQYGKYTPGEITYSAYLGKLFDGYIGHGTIVNRYVNNQRLDVY NVGLQADINSDFGGVQVFSNSIYTREVSSARVYIRPFAVGYKLFDIVTGRSKFLTMMTIAQGNVADEAGRRKVYEEVGAE EKESYRALIEDQKTQQKKEEMIPADKKPEKPQNLKEIFNQDNWVNRFAIGYTTAFDTKAPSELKFDTTGKLKVDENDNPL VKSTERLSITGFDFEYKLLSAKYIELTPYYDINKIRQIENAKGTHYGAILRLGGKDIYVQIKPEYRNMTATYIPMYFDSF YELERFQSNLQSHIPQTKLEAAKLADPDGPKVKGHFTTVLFNFYRFAIESNYENYAGPNNSRVFLGVYIPIGSMFLINGY YMKKAFDQNKEAFKLDDRSQGALELAINLGLITIRLQNIRKWVYDTASSQYEAQDEQKILFSGGLSF
Sequences:
>Translated_547_residues MTKRSKYLFVFLFLFFGIQTGIQAQLWIPPGRQYMHPTEPFTYDLGINKYQKDYYLYVAPTVNLNFGGDFGASLTLPLNF LIYDTEPKQENSKIGKLRSFDYNEKSDYLRLINNIWFGQYGKYTPGEITYSAYLGKLFDGYIGHGTIVNRYVNNQRLDVY NVGLQADINSDFGGVQVFSNSIYTREVSSARVYIRPFAVGYKLFDIVTGRSKFLTMMTIAQGNVADEAGRRKVYEEVGAE EKESYRALIEDQKTQQKKEEMIPADKKPEKPQNLKEIFNQDNWVNRFAIGYTTAFDTKAPSELKFDTTGKLKVDENDNPL VKSTERLSITGFDFEYKLLSAKYIELTPYYDINKIRQIENAKGTHYGAILRLGGKDIYVQIKPEYRNMTATYIPMYFDSF YELERFQSNLQSHIPQTKLEAAKLADPDGPKVKGHFTTVLFNFYRFAIESNYENYAGPNNSRVFLGVYIPIGSMFLINGY YMKKAFDQNKEAFKLDDRSQGALELAINLGLITIRLQNIRKWVYDTASSQYEAQDEQKILFSGGLSF >Mature_546_residues TKRSKYLFVFLFLFFGIQTGIQAQLWIPPGRQYMHPTEPFTYDLGINKYQKDYYLYVAPTVNLNFGGDFGASLTLPLNFL IYDTEPKQENSKIGKLRSFDYNEKSDYLRLINNIWFGQYGKYTPGEITYSAYLGKLFDGYIGHGTIVNRYVNNQRLDVYN VGLQADINSDFGGVQVFSNSIYTREVSSARVYIRPFAVGYKLFDIVTGRSKFLTMMTIAQGNVADEAGRRKVYEEVGAEE KESYRALIEDQKTQQKKEEMIPADKKPEKPQNLKEIFNQDNWVNRFAIGYTTAFDTKAPSELKFDTTGKLKVDENDNPLV KSTERLSITGFDFEYKLLSAKYIELTPYYDINKIRQIENAKGTHYGAILRLGGKDIYVQIKPEYRNMTATYIPMYFDSFY ELERFQSNLQSHIPQTKLEAAKLADPDGPKVKGHFTTVLFNFYRFAIESNYENYAGPNNSRVFLGVYIPIGSMFLINGYY MKKAFDQNKEAFKLDDRSQGALELAINLGLITIRLQNIRKWVYDTASSQYEAQDEQKILFSGGLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63094; Mature: 62963
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRSKYLFVFLFLFFGIQTGIQAQLWIPPGRQYMHPTEPFTYDLGINKYQKDYYLYVAP CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEE TVNLNFGGDFGASLTLPLNFLIYDTEPKQENSKIGKLRSFDYNEKSDYLRLINNIWFGQY EEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCC GKYTPGEITYSAYLGKLFDGYIGHGTIVNRYVNNQRLDVYNVGLQADINSDFGGVQVFSN CCCCCCCEEHHHHHHHHHHCCCCCCHHEEEECCCCEEEEEECCEEEECCCCCCCEEEECC SIYTREVSSARVYIRPFAVGYKLFDIVTGRSKFLTMMTIAQGNVADEAGRRKVYEEVGAE CEEEEECCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC EKESYRALIEDQKTQQKKEEMIPADKKPEKPQNLKEIFNQDNWVNRFAIGYTTAFDTKAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCC SELKFDTTGKLKVDENDNPLVKSTERLSITGFDFEYKLLSAKYIELTPYYDINKIRQIEN CCEEECCCCEEEECCCCCCCEECCCEEEEEECCEEEEEEEEEEEEECCCCCHHHHHHHHC AKGTHYGAILRLGGKDIYVQIKPEYRNMTATYIPMYFDSFYELERFQSNLQSHIPQTKLE CCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH AAKLADPDGPKVKGHFTTVLFNFYRFAIESNYENYAGPNNSRVFLGVYIPIGSMFLINGY HHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECC YMKKAFDQNKEAFKLDDRSQGALELAINLGLITIRLQNIRKWVYDTASSQYEAQDEQKIL HHHHHHCCCCCEEECCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCEEE FSGGLSF EECCCCC >Mature Secondary Structure TKRSKYLFVFLFLFFGIQTGIQAQLWIPPGRQYMHPTEPFTYDLGINKYQKDYYLYVAP CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEE TVNLNFGGDFGASLTLPLNFLIYDTEPKQENSKIGKLRSFDYNEKSDYLRLINNIWFGQY EEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCC GKYTPGEITYSAYLGKLFDGYIGHGTIVNRYVNNQRLDVYNVGLQADINSDFGGVQVFSN CCCCCCCEEHHHHHHHHHHCCCCCCHHEEEECCCCEEEEEECCEEEECCCCCCCEEEECC SIYTREVSSARVYIRPFAVGYKLFDIVTGRSKFLTMMTIAQGNVADEAGRRKVYEEVGAE CEEEEECCCCEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC EKESYRALIEDQKTQQKKEEMIPADKKPEKPQNLKEIFNQDNWVNRFAIGYTTAFDTKAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCC SELKFDTTGKLKVDENDNPLVKSTERLSITGFDFEYKLLSAKYIELTPYYDINKIRQIEN CCEEECCCCEEEECCCCCCCEECCCEEEEEECCEEEEEEEEEEEEECCCCCHHHHHHHHC AKGTHYGAILRLGGKDIYVQIKPEYRNMTATYIPMYFDSFYELERFQSNLQSHIPQTKLE CCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH AAKLADPDGPKVKGHFTTVLFNFYRFAIESNYENYAGPNNSRVFLGVYIPIGSMFLINGY HHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECC YMKKAFDQNKEAFKLDDRSQGALELAINLGLITIRLQNIRKWVYDTASSQYEAQDEQKIL HHHHHHCCCCCEEECCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCEEE FSGGLSF EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA