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The map label for this gene is yigC [C]

Identifier: 45657487

GI number: 45657487

Start: 1976868

End: 1978625

Strand: Direct

Name: yigC [C]

Synonym: LIC11615

Alternate gene names: 45657487

Gene position: 1976868-1978625 (Clockwise)

Preceding gene: 45657486

Following gene: 45657488

Centisome position: 46.22

GC content: 38.28

Gene sequence:

>1758_bases
ATGAAAATTAAATCTACTTCGGAATTTGTAAAAGAATTACAAATACAAAATGAACTTTTAATTATTGAAGAAGAAGTAGA
TCCAATATTAGAATTAGCTGAAATTCAAAGAAGGGTTGTCGCCAAAAGAGGACCGGCGATTCTTTTTAAAAACGTAAAAG
GTTCTCGTTTTAGCGTAGTAACCAATCTTTACGGCTCTGAAAGAAGAATGAAGATTGCATTCGGAGAAGAGCCGGTGCGG
TTCATTCGAAAAATTGCAACTACGATTCAACACATTCTTCCTCCTACGCCAGCAAAAATTTGGGATTTAAGAAACATAGC
ATTTCAAGCTTTGAAAGTGGGTCTCAAAAGAGTTGGTTCGGCTCCCGTTCTTGAAAACACATTAGATTCTTTGTATGAAC
TTCCGACGTTAATGTCCTGGCCCAAGGACGGAGGAAGATTTGTTACCCTTCCTTTGGTGTATACCGAAAGTCCTAAAACA
GGAAAGGGTAATTTGGGAATGTATCGAATTCAAATTTATGGGCCTATGGAAACTGGAATGCATATTCAGATTCATCGAGG
GGGAGGAAATCATTATTACGAAGCAGAAAAAGAAGGTCACTTTCTTCCTGTTCATATTTATGCGGGAGGCCCCCCTGCTC
TAACCATTGCCGCTGTCGCTCCTCTTCCAGAGGAAATCAGTGAATTGATTCTCGCCTCTTTATTGTTAGGTGAAAAATTA
AAGATTCAGAAGAACACAAACGTTTCTCCGTTACCAGTTGTTGCGGATGCAGATTTTCTAATTCAAGGAGTGATTCCTCC
TAAAATTCGAAAACCGGAAGGCCCTTTCGGAGATCACTACGGATATTATGCTTTAAAACATGATTATCCTATTGTTCAAG
TAAAACGGATTTATCACCGTAAGAACGCAATTTGGCCCGCGACTGTAGTGGGTCGCCCCCCTCAGGAGGATCATTGGATT
GCGGAATATTTACAAGATCTTTTATCTCCTTTGTTTCCGGTTGTTATGCCTGCTGTAAAAAAAGTATGGGCTTATGAAGA
ATCCGGAGTACATTCTCTTGCAGCTGCTGTTGTAAAAGAAAGATACCAAGGAGAGGCCTTTACAGGAGCTCTTAGAATTT
TAGGGGAGGGGCAACTTTCTCTTACTAAAGTATTACTCATAACTGACCAAGACGTGGATCTGAAGAATTTTAGAGAAACG
TTTATTACAGTATTAGAAAGAATGAATCCAATTACGGATCTTCATATTTTTGCAAATATCTCTCAAGATACTCTTGATTA
TACTGGACCTACTGTAAATCAGGGAAGTAAGGCGATCTTTTTGGGTTCTGGTAAAAAGAAAAACGATCTCAAAACTCAGT
TTAAAGGTAAGCTTAGCAATTCTTCATTTAAAAATCCGAAAATTCCCTATCCAGGAACTTTGGTGGTATCCGGACCTAAA
TATAAATTAAAAGATGGAGTTCCTGCTAAACTTTTAAAAGAAAAATTCATCCAAGATTTTTTATTCGTGTTTTTAGTGGA
CGATTCGGAGGACACGATACGTTCCGATCACGATTTTATCTGGTCTGTCTTTACACGTTTTGAACCAGCTGGAGATATTT
ATGCGAATACGAAATTAATTCGAAATCATCCTGCTTTTTATCCTCCAATAGTGGTGGATTGTAGAATGAAAACTTGGTAT
CCTCCACTGACAGAAGCAGATTCTAAAACGATCCGAAAAGTAGATGATAGATTTGGTAGACTGATAGACTCACTTTAG

Upstream 100 bases:

>100_bases
AGTCAGAACTTAAAGAAGAATTTCCTTCTTCCATTTCCGGTAAACTAATTAAACTCAGAAATAAAAACAAAAAACAACCA
GAACTTCCGGTGGGAAAATT

Downstream 100 bases:

>100_bases
TAGATTTGAATTCTATGGCAAAAAAGAAATGTATCGTTACCGGTGGTGCGGGGCTTATCGGTTCTAATCTAGTTCAAGAA
CTTAATAGACTAGGAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: 4-hydroxybenzoate DC; HBDC [H]

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKIKSTSEFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVVTNLYGSERRMKIAFGEEPVR
FIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRVGSAPVLENTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKT
GKGNLGMYRIQIYGPMETGMHIQIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKL
KIQKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHRKNAIWPATVVGRPPQEDHWI
AEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKERYQGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRET
FITVLERMNPITDLHIFANISQDTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYPGTLVVSGPK
YKLKDGVPAKLLKEKFIQDFLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKLIRNHPAFYPPIVVDCRMKTWY
PPLTEADSKTIRKVDDRFGRLIDSL

Sequences:

>Translated_585_residues
MKIKSTSEFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVVTNLYGSERRMKIAFGEEPVR
FIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRVGSAPVLENTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKT
GKGNLGMYRIQIYGPMETGMHIQIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKL
KIQKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHRKNAIWPATVVGRPPQEDHWI
AEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKERYQGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRET
FITVLERMNPITDLHIFANISQDTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYPGTLVVSGPK
YKLKDGVPAKLLKEKFIQDFLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKLIRNHPAFYPPIVVDCRMKTWY
PPLTEADSKTIRKVDDRFGRLIDSL
>Mature_585_residues
MKIKSTSEFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVVTNLYGSERRMKIAFGEEPVR
FIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRVGSAPVLENTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKT
GKGNLGMYRIQIYGPMETGMHIQIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKL
KIQKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHRKNAIWPATVVGRPPQEDHWI
AEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKERYQGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRET
FITVLERMNPITDLHIFANISQDTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYPGTLVVSGPK
YKLKDGVPAKLLKEKFIQDFLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKLIRNHPAFYPPIVVDCRMKTWY
PPLTEADSKTIRKVDDRFGRLIDSL

Specific function: Catalyzes the reversible decarboxylation of 4- hydroxybenzoate [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=450, Percent_Identity=31.7777777777778, Blast_Score=228, Evalue=7e-61,
Organism=Saccharomyces cerevisiae, GI6320748, Length=463, Percent_Identity=25.4859611231102, Blast_Score=104, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 65924; Mature: 65924

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSTSEFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVV
CCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE
TNLYGSERRMKIAFGEEPVRFIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRVGS
EECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
APVLENTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKTGKGNLGMYRIQIYGPMETGM
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCE
HIQIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKL
EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCE
KIQKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHR
EEECCCCCCCCEEEECCHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
KNAIWPATVVGRPPQEDHWIAEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKE
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RYQGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRETFITVLERMNPITDLHIFANI
HHCCCHHEEHHHEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
SQDTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYPGTLVVSGPK
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
YKLKDGVPAKLLKEKFIQDFLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKLI
EECCCCCCHHHHHHHHHHHEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCEEECCEEE
RNHPAFYPPIVVDCRMKTWYPPLTEADSKTIRKVDDRFGRLIDSL
ECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIKSTSEFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVV
CCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE
TNLYGSERRMKIAFGEEPVRFIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRVGS
EECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
APVLENTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKTGKGNLGMYRIQIYGPMETGM
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCE
HIQIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKL
EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCE
KIQKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHR
EEECCCCCCCCEEEECCHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
KNAIWPATVVGRPPQEDHWIAEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKE
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RYQGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRETFITVLERMNPITDLHIFANI
HHCCCHHEEHHHEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
SQDTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYPGTLVVSGPK
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
YKLKDGVPAKLLKEKFIQDFLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKLI
EECCCCCCHHHHHHHHHHHEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCEEECCEEE
RNHPAFYPPIVVDCRMKTWYPPLTEADSKTIRKVDDRFGRLIDSL
ECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]