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The map label for this gene is 45657442

Identifier: 45657442

GI number: 45657442

Start: 1928812

End: 1929720

Strand: Direct

Name: 45657442

Synonym: LIC11569

Alternate gene names: NA

Gene position: 1928812-1929720 (Clockwise)

Preceding gene: 45657441

Following gene: 45657443

Centisome position: 45.1

GC content: 39.71

Gene sequence:

>909_bases
ATGAACGCGATTTTTTTAGAACTCAGGAAAAATACATTTTATACTCTCATTCCAGTTATTTTATTTTTTTCTTATTCACT
TTCTTATCTTTTAAGAGCGGTGATTCTTGCCTTTTTGAATCCGAGTATTCAGGCCGCGAGTTCCGGAACAAATCCGATTC
GCAAAGTAGGTTTGGAAACTACAAATCGATCTCTTTCTTCTTATGAGGAAATGGTTCAAGGAAATTTAATTCGCGGTATG
ATTCCTAAAGAAGGAGAAATTTCTACAGAAGGAGAAATTTCGGCGGCTTCTGCTCCACCAGATACGGGAGAAGGAGAAGA
AATGAAAATTACCGGAACCTTAAGTGGTCATTGGTCTTTTGCTCGTGCTACGATTGTAGAAAAAGGAAAAGCAGAAGCGC
AGGAATTTGCGATTGGAGAAACGGTAGGTGGGTATAAAATCCGTTCTATTTCTCTCAACTATGTAGTTTTGGAAAAAAGT
GGAATTTCTCTCAAAGTAGAAATCGGTCAAACCCCGGGGGAAGCAAGGGCCAAGTTGAATTTAGACGCTGGTCCAAAAGC
GGAAGGTGGACCTCCCGCGGGTGATACGGTTCGTAAAGTTCTTTCTAGACAAGATGTAAACCGTAAATTGAAAGACCAAG
CGGCGATCTTTAAAAATGCGAGATTTGGCCCCGCGTTGATCAATGGTAAAATTTCCGGTTATAAAATCTATAGTGTTACT
CCGGAACATATCTTTTATTCCTTAGGAGCTAGAAATGGAGATATTATCAAACGAGTAAATGGAATGCCGTTGACCGAAAC
CGAAAAAATGTTAGAGATCTGGGGAGCTGTAAAAACTGCCGATAAGATTACAGTAGATGTGGAAAGAGGTAGCCAGATTC
TCACCTACGAATTTATTATCAGAAACTAA

Upstream 100 bases:

>100_bases
AAGATTGTGACTCCTTTAGACCCTGGTAAATTTGCTAGATTGTGAGTAGTCGGAGATTTTCTGACTTCTTCTTAGAAAGA
AATTTTCTGATCGGACTCCT

Downstream 100 bases:

>100_bases
AAAGATGTCCGGAACAATCAGTCAACTTTCAATCTTTAGAATATTCTCCCTTCTCATACTTTTGTTTTTAGTATGGGACA
AACCAGTCTTTCCTCAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretory Pathway Component Protein C; PDZ/DHR/GLGF Domain Protein; Type II Secretory Pathway Component PulC-Like Protein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSIQAASSGTNPIRKVGLETTNRSLSSYEEMVQGNLIRGM
IPKEGEISTEGEISAASAPPDTGEGEEMKITGTLSGHWSFARATIVEKGKAEAQEFAIGETVGGYKIRSISLNYVVLEKS
GISLKVEIGQTPGEARAKLNLDAGPKAEGGPPAGDTVRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKISGYKIYSVT
PEHIFYSLGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILTYEFIIRN

Sequences:

>Translated_302_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSIQAASSGTNPIRKVGLETTNRSLSSYEEMVQGNLIRGM
IPKEGEISTEGEISAASAPPDTGEGEEMKITGTLSGHWSFARATIVEKGKAEAQEFAIGETVGGYKIRSISLNYVVLEKS
GISLKVEIGQTPGEARAKLNLDAGPKAEGGPPAGDTVRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKISGYKIYSVT
PEHIFYSLGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILTYEFIIRN
>Mature_302_residues
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSIQAASSGTNPIRKVGLETTNRSLSSYEEMVQGNLIRGM
IPKEGEISTEGEISAASAPPDTGEGEEMKITGTLSGHWSFARATIVEKGKAEAQEFAIGETVGGYKIRSISLNYVVLEKS
GISLKVEIGQTPGEARAKLNLDAGPKAEGGPPAGDTVRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKISGYKIYSVT
PEHIFYSLGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILTYEFIIRN

Specific function: Unknown

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32950; Mature: 32950

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSIQAASSGTNPIRKVGLET
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCC
TNRSLSSYEEMVQGNLIRGMIPKEGEISTEGEISAASAPPDTGEGEEMKITGTLSGHWSF
CCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHH
ARATIVEKGKAEAQEFAIGETVGGYKIRSISLNYVVLEKSGISLKVEIGQTPGEARAKLN
HHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEE
LDAGPKAEGGPPAGDTVRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKISGYKIYSVT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEC
PEHIFYSLGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILTYEFII
HHHHEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEE
RN
EC
>Mature Secondary Structure
MNAIFLELRKNTFYTLIPVILFFSYSLSYLLRAVILAFLNPSIQAASSGTNPIRKVGLET
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCC
TNRSLSSYEEMVQGNLIRGMIPKEGEISTEGEISAASAPPDTGEGEEMKITGTLSGHWSF
CCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHH
ARATIVEKGKAEAQEFAIGETVGGYKIRSISLNYVVLEKSGISLKVEIGQTPGEARAKLN
HHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEE
LDAGPKAEGGPPAGDTVRKVLSRQDVNRKLKDQAAIFKNARFGPALINGKISGYKIYSVT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEC
PEHIFYSLGARNGDIIKRVNGMPLTETEKMLEIWGAVKTADKITVDVERGSQILTYEFII
HHHHEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEE
RN
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA