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The map label for this gene is yebA [H]

Identifier: 45657441

GI number: 45657441

Start: 1927746

End: 1928756

Strand: Direct

Name: yebA [H]

Synonym: LIC11568

Alternate gene names: 45657441

Gene position: 1927746-1928756 (Clockwise)

Preceding gene: 45657440

Following gene: 45657442

Centisome position: 45.07

GC content: 38.08

Gene sequence:

>1011_bases
ATGAACTTGTGGAATACAAAAAGAAAAAATAAATCCTCGAGAAGTGGAGGATCAAGATCGGATGTATCTGAATCCGATAC
TAAAAAAGTGAACGGGAAACTTTTTTTTATTTTTTTGATTTCCTACTTGGTGTTCGGTTCTATTTTTGCGGACCCTCTGA
AAAATTACGACGCAGAAATTTCAGAATATACCAATAAGGATTCTTCCTTTTTTTCCGATAAGGAAGAACGTAAAATTAAA
CAACTATTTTCTCAATCTCCTGAAAATTGGCAGGAAGAAAAATATTCTCTCAATTATCACAAAGACAAATCTAACTTAGA
ACTTCCCAGTTTTATCAATGTCAATAGGGTTATCTCTTCTAAGATCGTTAACCACAGTGGAATCATATATAAAAATTATG
TAGTCAAACCCAAGGATTCTCTTTCTAAAATTGCAAGAGAAATGAAAACTTCGGTTCAAAAAATCGTTTCTGCCAACGGC
TTGAAAAAGAATTCAACTCTTCAAGTGGGGCTGAATCTTTCCATTCCGGTGCAGGTTCGTAACGCGAGCCGAGAAAAAGT
AGAATTCCATAAATTATTTGTACATCCTGTTTTAAATGCAAGAGTCACTTCTCGTTATGGAAGAAGAAAAGATCCGTTTC
ATACTGGTTCGGGTGGCTTCCATACCGGTTTGGATTTTGCTGGGGCTCAAGGCGCTCCGATCCTTGCGTCTGCCGATGGA
GTCGTATCCTTTGCCGGGGTGAACGGAGGATATGGAAATACTGTAATTATAGATCATGATAACGGCTATAAAACAATGTA
TGCTCACTGCTCTAAAATTACAATTGAACAGGGAACTAGAGTGAATACTGGAACGGTCATAGGTGCAATCGGCAGGACCG
GGTCGGCTACGGGACCTCATCTTCATTTTGAAGTCTTTTTAAATGGAAATAGAGTAAATCCAGACGTCGCTTTGAAAAAA
GCGTTAAAGATTGTGACTCCTTTAGACCCTGGTAAATTTGCTAGATTGTGA

Upstream 100 bases:

>100_bases
AAAAGAGAATACGCCATCGGAAGAATGATCCTTTATCAATTGAATGACGAATATAGCGGTAAAAAAATTACTGTAGAAGA
TTTGGATAAACTTATAGCCA

Downstream 100 bases:

>100_bases
GTAGTCGGAGATTTTCTGACTTCTTCTTAGAAAGAAATTTTCTGATCGGACTCCTATGAACGCGATTTTTTTAGAACTCA
GGAAAAATACATTTTATACT

Product: membrane peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNLWNTKRKNKSSRSGGSRSDVSESDTKKVNGKLFFIFLISYLVFGSIFADPLKNYDAEISEYTNKDSSFFSDKEERKIK
QLFSQSPENWQEEKYSLNYHKDKSNLELPSFINVNRVISSKIVNHSGIIYKNYVVKPKDSLSKIAREMKTSVQKIVSANG
LKKNSTLQVGLNLSIPVQVRNASREKVEFHKLFVHPVLNARVTSRYGRRKDPFHTGSGGFHTGLDFAGAQGAPILASADG
VVSFAGVNGGYGNTVIIDHDNGYKTMYAHCSKITIEQGTRVNTGTVIGAIGRTGSATGPHLHFEVFLNGNRVNPDVALKK
ALKIVTPLDPGKFARL

Sequences:

>Translated_336_residues
MNLWNTKRKNKSSRSGGSRSDVSESDTKKVNGKLFFIFLISYLVFGSIFADPLKNYDAEISEYTNKDSSFFSDKEERKIK
QLFSQSPENWQEEKYSLNYHKDKSNLELPSFINVNRVISSKIVNHSGIIYKNYVVKPKDSLSKIAREMKTSVQKIVSANG
LKKNSTLQVGLNLSIPVQVRNASREKVEFHKLFVHPVLNARVTSRYGRRKDPFHTGSGGFHTGLDFAGAQGAPILASADG
VVSFAGVNGGYGNTVIIDHDNGYKTMYAHCSKITIEQGTRVNTGTVIGAIGRTGSATGPHLHFEVFLNGNRVNPDVALKK
ALKIVTPLDPGKFARL
>Mature_336_residues
MNLWNTKRKNKSSRSGGSRSDVSESDTKKVNGKLFFIFLISYLVFGSIFADPLKNYDAEISEYTNKDSSFFSDKEERKIK
QLFSQSPENWQEEKYSLNYHKDKSNLELPSFINVNRVISSKIVNHSGIIYKNYVVKPKDSLSKIAREMKTSVQKIVSANG
LKKNSTLQVGLNLSIPVQVRNASREKVEFHKLFVHPVLNARVTSRYGRRKDPFHTGSGGFHTGLDFAGAQGAPILASADG
VVSFAGVNGGYGNTVIIDHDNGYKTMYAHCSKITIEQGTRVNTGTVIGAIGRTGSATGPHLHFEVFLNGNRVNPDVALKK
ALKIVTPLDPGKFARL

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=118, Percent_Identity=43.2203389830509, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789099, Length=109, Percent_Identity=38.5321100917431, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082174, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37206; Mature: 37206

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLWNTKRKNKSSRSGGSRSDVSESDTKKVNGKLFFIFLISYLVFGSIFADPLKNYDAEI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
SEYTNKDSSFFSDKEERKIKQLFSQSPENWQEEKYSLNYHKDKSNLELPSFINVNRVISS
HHHCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCCCCCCCCHHHHHHH
KIVNHSGIIYKNYVVKPKDSLSKIAREMKTSVQKIVSANGLKKNSTLQVGLNLSIPVQVR
HHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
NASREKVEFHKLFVHPVLNARVTSRYGRRKDPFHTGSGGFHTGLDFAGAQGAPILASADG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VVSFAGVNGGYGNTVIIDHDNGYKTMYAHCSKITIEQGTRVNTGTVIGAIGRTGSATGPH
EEEEECCCCCCCCEEEEECCCCCEEEEEHHCEEEECCCCEECCCEEEEECCCCCCCCCCE
LHFEVFLNGNRVNPDVALKKALKIVTPLDPGKFARL
EEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNLWNTKRKNKSSRSGGSRSDVSESDTKKVNGKLFFIFLISYLVFGSIFADPLKNYDAEI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
SEYTNKDSSFFSDKEERKIKQLFSQSPENWQEEKYSLNYHKDKSNLELPSFINVNRVISS
HHHCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCCCCCCCCHHHHHHH
KIVNHSGIIYKNYVVKPKDSLSKIAREMKTSVQKIVSANGLKKNSTLQVGLNLSIPVQVR
HHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEC
NASREKVEFHKLFVHPVLNARVTSRYGRRKDPFHTGSGGFHTGLDFAGAQGAPILASADG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VVSFAGVNGGYGNTVIIDHDNGYKTMYAHCSKITIEQGTRVNTGTVIGAIGRTGSATGPH
EEEEECCCCCCCCEEEEECCCCCEEEEEHHCEEEECCCCEECCCEEEEECCCCCCCCCCE
LHFEVFLNGNRVNPDVALKKALKIVTPLDPGKFARL
EEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]