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The map label for this gene is nlpC [H]

Identifier: 45657409

GI number: 45657409

Start: 1898142

End: 1899413

Strand: Direct

Name: nlpC [H]

Synonym: LIC11536

Alternate gene names: 45657409

Gene position: 1898142-1899413 (Clockwise)

Preceding gene: 45657408

Following gene: 45657411

Centisome position: 44.38

GC content: 39.54

Gene sequence:

>1272_bases
ATGTTTAGAATTATTCAAATCTTTTTTGTTTTGGTTTGGATGCCCATTTCCATTTTTGCGGATCCATTTTCAGATCTTCT
TAAGGAAGATTTCGAAGCAGGGCAAACTCTTCTGATTCGAAATTCCGTCTTTCAAAAGTTAGGTGGTAAGTCTAAGGATC
CGAAAGTGATCGAAATAACAAAGAATACGATCCCTTGGGCCATCATGGAGGGTTTGGCTCCGGACACGATTGCGGATTTG
ATCGTAAATCAATACTACGTGTCTCTTTCCGGTTTACGTTTTACGGAGGCGGAAGACGCAATTCCGATTCTTTCTAAACA
AAAACTTTCTGAAAAAGATTTTGTTTTAGTTTCTTTATTTGTAAAAGAAACATCTCAGGCTGGGATTCGAGAAGAAATCA
GAAACGTTTTTTTATCTACTGCGTTGAAATCTCGTTGGGATGGATTTGCGATTTTAGCGGGCGGAAGGGCACTCATCGCT
GGAAAATTTGTAGGGATTCCTGAAAATAGGCTCGCATCTAGAATATTGGGTTCTTTTCCAAACAGAGGAGCAATAGTTCC
CTTTGAAAAAACTGATTCCGCTTTTAGACAAGCAATTTTTTTCAATCCGACAAACGATCGTTATACGTTGGCGTCGGATC
TTTTATCTCAACTTAAGTCATTACACGAAGGAACTAAAAGTAGGTCTTTGGATTCTTGGACCGGAACAATCTCTCAGGCT
CGGACCTTGGATAGAAGTTTAGATTCTGCCGGTGAAATAGTAATCGGAGATAGACCGAAATTTGGATTTGAAGAAAATAT
TCCAGAACCTCCTCTGGTTCCGGAAGTTGAACCGGAAGCGCCAGTTCAACCTGGTAAAGTGGAATGGGAAATATTAAATT
CTTCTAATTTAGTTTCAGTTGTTAAGGAATGGTTAGGAACTCCTTATTATTGGGGAGGAACTTCTAAAAAAGGTGTGGAT
TGTTCGGGATTTACGTTTAGTTCTTTGACGGATAAACGTGTAGGAGTTCCCGTAAAAATACTTCCCCGTCTTGGAAGGGA
ACAGGCTAATTCTGGAAGTAAGGTTTCTCATCAGAGTTTAAGAGCGGGAGATTTGATTTTTTTCTCAGCGTCTCCCAATC
AAAGTAAAATCACTCACGTTGGTCTTGTAATCAACGAAAAAGAATTTGCGCATGCTTCTTCCACGCGTGGGGTGGTTGTC
GATAAAATTTCTATGAAGTGGTGGATCGATCGTTATGTGACATCGCGACGATTATTTAAAAAAGTATTATAA

Upstream 100 bases:

>100_bases
TATATTACAAGAAAAAAACTTCAAAACTGGATGCACGGAGCGGACCAGTGAAATATTCAATTTTTTATAGATTCTAAAAT
TTATATATTAGGGAATTTTT

Downstream 100 bases:

>100_bases
GAAAAACTTTATAAAATGGGTTTTTAATTTGTTATTGTTTGCGGAGCGGCGATCGTATTCGGAAATTTGAATTTAAGATC
TTTATAAATCTGTACTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFRIIQIFFVLVWMPISIFADPFSDLLKEDFEAGQTLLIRNSVFQKLGGKSKDPKVIEITKNTIPWAIMEGLAPDTIADL
IVNQYYVSLSGLRFTEAEDAIPILSKQKLSEKDFVLVSLFVKETSQAGIREEIRNVFLSTALKSRWDGFAILAGGRALIA
GKFVGIPENRLASRILGSFPNRGAIVPFEKTDSAFRQAIFFNPTNDRYTLASDLLSQLKSLHEGTKSRSLDSWTGTISQA
RTLDRSLDSAGEIVIGDRPKFGFEENIPEPPLVPEVEPEAPVQPGKVEWEILNSSNLVSVVKEWLGTPYYWGGTSKKGVD
CSGFTFSSLTDKRVGVPVKILPRLGREQANSGSKVSHQSLRAGDLIFFSASPNQSKITHVGLVINEKEFAHASSTRGVVV
DKISMKWWIDRYVTSRRLFKKVL

Sequences:

>Translated_423_residues
MFRIIQIFFVLVWMPISIFADPFSDLLKEDFEAGQTLLIRNSVFQKLGGKSKDPKVIEITKNTIPWAIMEGLAPDTIADL
IVNQYYVSLSGLRFTEAEDAIPILSKQKLSEKDFVLVSLFVKETSQAGIREEIRNVFLSTALKSRWDGFAILAGGRALIA
GKFVGIPENRLASRILGSFPNRGAIVPFEKTDSAFRQAIFFNPTNDRYTLASDLLSQLKSLHEGTKSRSLDSWTGTISQA
RTLDRSLDSAGEIVIGDRPKFGFEENIPEPPLVPEVEPEAPVQPGKVEWEILNSSNLVSVVKEWLGTPYYWGGTSKKGVD
CSGFTFSSLTDKRVGVPVKILPRLGREQANSGSKVSHQSLRAGDLIFFSASPNQSKITHVGLVINEKEFAHASSTRGVVV
DKISMKWWIDRYVTSRRLFKKVL
>Mature_423_residues
MFRIIQIFFVLVWMPISIFADPFSDLLKEDFEAGQTLLIRNSVFQKLGGKSKDPKVIEITKNTIPWAIMEGLAPDTIADL
IVNQYYVSLSGLRFTEAEDAIPILSKQKLSEKDFVLVSLFVKETSQAGIREEIRNVFLSTALKSRWDGFAILAGGRALIA
GKFVGIPENRLASRILGSFPNRGAIVPFEKTDSAFRQAIFFNPTNDRYTLASDLLSQLKSLHEGTKSRSLDSWTGTISQA
RTLDRSLDSAGEIVIGDRPKFGFEENIPEPPLVPEVEPEAPVQPGKVEWEILNSSNLVSVVKEWLGTPYYWGGTSKKGVD
CSGFTFSSLTDKRVGVPVKILPRLGREQANSGSKVSHQSLRAGDLIFFSASPNQSKITHVGLVINEKEFAHASSTRGVVV
DKISMKWWIDRYVTSRRLFKKVL

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=127, Percent_Identity=36.2204724409449, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788001, Length=140, Percent_Identity=32.1428571428571, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 47089; Mature: 47089

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIIQIFFVLVWMPISIFADPFSDLLKEDFEAGQTLLIRNSVFQKLGGKSKDPKVIEIT
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCEEEEEE
KNTIPWAIMEGLAPDTIADLIVNQYYVSLSGLRFTEAEDAIPILSKQKLSEKDFVLVSLF
CCCCCHHHHHCCCHHHHHHHHHHHHHHEECCEEECCCCCCCCHHHHHHCCCCCEEEEEEE
VKETSQAGIREEIRNVFLSTALKSRWDGFAILAGGRALIAGKFVGIPENRLASRILGSFP
HHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCC
NRGAIVPFEKTDSAFRQAIFFNPTNDRYTLASDLLSQLKSLHEGTKSRSLDSWTGTISQA
CCCCEEECCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
RTLDRSLDSAGEIVIGDRPKFGFEENIPEPPLVPEVEPEAPVQPGKVEWEILNSSNLVSV
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH
VKEWLGTPYYWGGTSKKGVDCSGFTFSSLTDKRVGVPVKILPRLGREQANSGSKVSHQSL
HHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHC
RAGDLIFFSASPNQSKITHVGLVINEKEFAHASSTRGVVVDKISMKWWIDRYVTSRRLFK
CCCCEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
KVL
HHC
>Mature Secondary Structure
MFRIIQIFFVLVWMPISIFADPFSDLLKEDFEAGQTLLIRNSVFQKLGGKSKDPKVIEIT
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCEEEEEE
KNTIPWAIMEGLAPDTIADLIVNQYYVSLSGLRFTEAEDAIPILSKQKLSEKDFVLVSLF
CCCCCHHHHHCCCHHHHHHHHHHHHHHEECCEEECCCCCCCCHHHHHHCCCCCEEEEEEE
VKETSQAGIREEIRNVFLSTALKSRWDGFAILAGGRALIAGKFVGIPENRLASRILGSFP
HHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCC
NRGAIVPFEKTDSAFRQAIFFNPTNDRYTLASDLLSQLKSLHEGTKSRSLDSWTGTISQA
CCCCEEECCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHH
RTLDRSLDSAGEIVIGDRPKFGFEENIPEPPLVPEVEPEAPVQPGKVEWEILNSSNLVSV
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH
VKEWLGTPYYWGGTSKKGVDCSGFTFSSLTDKRVGVPVKILPRLGREQANSGSKVSHQSL
HHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHC
RAGDLIFFSASPNQSKITHVGLVINEKEFAHASSTRGVVVDKISMKWWIDRYVTSRRLFK
CCCCEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
KVL
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]