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The map label for this gene is icfG [H]

Identifier: 45657302

GI number: 45657302

Start: 1752578

End: 1753834

Strand: Direct

Name: icfG [H]

Synonym: LIC11426

Alternate gene names: 45657302

Gene position: 1752578-1753834 (Clockwise)

Preceding gene: 45657301

Following gene: 45657303

Centisome position: 40.98

GC content: 36.75

Gene sequence:

>1257_bases
ATGACCGGTTCCAGGCGATCAGAACAGAAAAGTTACGAGCCCCGTTATTCTATTCTGTTTCAATCTGCGATAGACTCGAT
CGTTTCTTTGGACAGAGAATTTAGAGTCATTTTAGCAAACCCAGCTACTGAAAAGACGTTTGGATTTCCCACTTCCGAAT
TGGTCGGAAGTTTAGTTGAATGTCTGCTTCCTTTTCCCATTCGAAATCGATTTTATAAAATTCTAAATAGTGTAGCTAAA
CTTCCTGATAAAAAAAGGCAAAAACCTTTTGGGCCGATCCGTTTGATTCGAAAAGACGGTAAAACTTTAATTTCTGAGAT
TTCCGTTTCCGCTACTGGACCTGTAGAAGACTATCGTTATCATATAGTCATTCGAAACATATCAGAAAAACATAGAATTC
TAATGGAGTTAAAACGCGCTAATGAGTCTTTAAAAAAGATGGACCGTGAAAAAGAGGAACTTCTAGAAAAACTTGAAGAG
AAAGTCAGGCAGAGGTCCAGATTACTTGCAAATTATTATAAAGGAATGAAGGAAGAACTGAATCTTGCAAAAAAATTACA
GACCGAAATTTTGCCGGACATTCCTTCTTTTGCCGGAATTAGAATTCATTCCACATATCTTCCAATGATGGAAGTAGGGG
GAGACCTTTATGATTTATTTGAAATCCGTCCAGGAGTGTTACGCGTATTTATTGCGGATGCTACAGGACACGGTATACAA
GCTGCACTTCTTACAATGACACTCAAAGGAATTTTAGAATCGATTAAAAAAAAAGATACGGATCCCGGAAGTATTCTCAC
AGAATTTAATTACCAATATTGCAAGAATTTCGGAAATATAGGAATGTTCTTTTCCTGTTTTCTCGCTGACATAGATACCG
TTTCTAAAAAGATCGTGTATTCTTCCGGAGGTCATCCTCCTCAATTTTTTCTTTCTGAGGATTTGGTTTTGGGCTTAGAT
CGAACTGGGTCTTTACTCGGTTTAGATCTGAACAATCAATACGACATTTTTAAACTGAGTTATCAATATGGAGATCGTTT
ATTTTTATTTACGGATGGAATTTATGAGGAATTCAATTCCGACAAACAGCAATTTGGCGAATTTGCGGTTCAAGAAATTT
TGGCGAAAAAATTTTCGGAACCTATGGAGGAAACGATTCCGGCGATATTACAGAAACTGATCGATCATTTAGGTCAGCAA
AAAATACAAGACGATATAACTGCGATTTTAATCGCTTTAGATTTTCCCCATCTTTAA

Upstream 100 bases:

>100_bases
AGTGACTCGCTTTTATCTGGATCTTCCAGAATCGATTTGAAAGATCCTTGACTTTTTAGGAGGACGATCACATTCTAATA
GACTCCTTTTAAACCACTCT

Downstream 100 bases:

>100_bases
GATGTCTTTTTTTATTTTAAGTTTTCTATTTTTAGTTTTTTGTGCCTTTCTTTTTTTAGAGAAAAAAAGTCATGACCAAA
TATTAAAACGAATTCCAATT

Product: sigma factor regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTGSRRSEQKSYEPRYSILFQSAIDSIVSLDREFRVILANPATEKTFGFPTSELVGSLVECLLPFPIRNRFYKILNSVAK
LPDKKRQKPFGPIRLIRKDGKTLISEISVSATGPVEDYRYHIVIRNISEKHRILMELKRANESLKKMDREKEELLEKLEE
KVRQRSRLLANYYKGMKEELNLAKKLQTEILPDIPSFAGIRIHSTYLPMMEVGGDLYDLFEIRPGVLRVFIADATGHGIQ
AALLTMTLKGILESIKKKDTDPGSILTEFNYQYCKNFGNIGMFFSCFLADIDTVSKKIVYSSGGHPPQFFLSEDLVLGLD
RTGSLLGLDLNNQYDIFKLSYQYGDRLFLFTDGIYEEFNSDKQQFGEFAVQEILAKKFSEPMEETIPAILQKLIDHLGQQ
KIQDDITAILIALDFPHL

Sequences:

>Translated_418_residues
MTGSRRSEQKSYEPRYSILFQSAIDSIVSLDREFRVILANPATEKTFGFPTSELVGSLVECLLPFPIRNRFYKILNSVAK
LPDKKRQKPFGPIRLIRKDGKTLISEISVSATGPVEDYRYHIVIRNISEKHRILMELKRANESLKKMDREKEELLEKLEE
KVRQRSRLLANYYKGMKEELNLAKKLQTEILPDIPSFAGIRIHSTYLPMMEVGGDLYDLFEIRPGVLRVFIADATGHGIQ
AALLTMTLKGILESIKKKDTDPGSILTEFNYQYCKNFGNIGMFFSCFLADIDTVSKKIVYSSGGHPPQFFLSEDLVLGLD
RTGSLLGLDLNNQYDIFKLSYQYGDRLFLFTDGIYEEFNSDKQQFGEFAVQEILAKKFSEPMEETIPAILQKLIDHLGQQ
KIQDDITAILIALDFPHL
>Mature_417_residues
TGSRRSEQKSYEPRYSILFQSAIDSIVSLDREFRVILANPATEKTFGFPTSELVGSLVECLLPFPIRNRFYKILNSVAKL
PDKKRQKPFGPIRLIRKDGKTLISEISVSATGPVEDYRYHIVIRNISEKHRILMELKRANESLKKMDREKEELLEKLEEK
VRQRSRLLANYYKGMKEELNLAKKLQTEILPDIPSFAGIRIHSTYLPMMEVGGDLYDLFEIRPGVLRVFIADATGHGIQA
ALLTMTLKGILESIKKKDTDPGSILTEFNYQYCKNFGNIGMFFSCFLADIDTVSKKIVYSSGGHPPQFFLSEDLVLGLDR
TGSLLGLDLNNQYDIFKLSYQYGDRLFLFTDGIYEEFNSDKQQFGEFAVQEILAKKFSEPMEETIPAILQKLIDHLGQQK
IQDDITAILIALDFPHL

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 47820; Mature: 47689

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSRRSEQKSYEPRYSILFQSAIDSIVSLDREFRVILANPATEKTFGFPTSELVGSLVE
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
CLLPFPIRNRFYKILNSVAKLPDKKRQKPFGPIRLIRKDGKTLISEISVSATGPVEDYRY
HHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCEE
HIVIRNISEKHRILMELKRANESLKKMDREKEELLEKLEEKVRQRSRLLANYYKGMKEEL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLAKKLQTEILPDIPSFAGIRIHSTYLPMMEVGGDLYDLFEIRPGVLRVFIADATGHGIQ
HHHHHHHHHHCCCCCCCCCEEEEHHHCHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCHH
AALLTMTLKGILESIKKKDTDPGSILTEFNYQYCKNFGNIGMFFSCFLADIDTVSKKIVY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
SSGGHPPQFFLSEDLVLGLDRTGSLLGLDLNNQYDIFKLSYQYGDRLFLFTDGIYEEFNS
CCCCCCCHHHCCCCCEEECCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECHHHHHHCC
DKQQFGEFAVQEILAKKFSEPMEETIPAILQKLIDHLGQQKIQDDITAILIALDFPHL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGSRRSEQKSYEPRYSILFQSAIDSIVSLDREFRVILANPATEKTFGFPTSELVGSLVE
CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
CLLPFPIRNRFYKILNSVAKLPDKKRQKPFGPIRLIRKDGKTLISEISVSATGPVEDYRY
HHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCEE
HIVIRNISEKHRILMELKRANESLKKMDREKEELLEKLEEKVRQRSRLLANYYKGMKEEL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLAKKLQTEILPDIPSFAGIRIHSTYLPMMEVGGDLYDLFEIRPGVLRVFIADATGHGIQ
HHHHHHHHHHCCCCCCCCCEEEEHHHCHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCHH
AALLTMTLKGILESIKKKDTDPGSILTEFNYQYCKNFGNIGMFFSCFLADIDTVSKKIVY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
SSGGHPPQFFLSEDLVLGLDRTGSLLGLDLNNQYDIFKLSYQYGDRLFLFTDGIYEEFNS
CCCCCCCHHHCCCCCEEECCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECHHHHHHCC
DKQQFGEFAVQEILAKKFSEPMEETIPAILQKLIDHLGQQKIQDDITAILIALDFPHL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]