Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45657259
Identifier: 45657259
GI number: 45657259
Start: 1698641
End: 1700626
Strand: Direct
Name: 45657259
Synonym: LIC11381
Alternate gene names: NA
Gene position: 1698641-1700626 (Clockwise)
Preceding gene: 45657258
Following gene: 45657260
Centisome position: 39.71
GC content: 41.29
Gene sequence:
>1986_bases ATGGGTTCTCTAATACCATTCTTACAAGACCAAAGCAAGGAACTGGATCGTATCCAGAACGAACAGGTGGAAGTTTACGG AGACACTCTCGAAAACTCCCTACGTCTCGCCGCGAAACATCTTAAAAAACAAGTACATGAACTAGACTATGTAGTTCTAA AACGTGGAAAGAAAAAACTCTTTGGTCACGAACCTTGGCATATTCGTGTTTCGATTCTTCCGGAAGATAACTTTTTAGAT GAGTTGACCGAACTTGATCAAAAACTTACTGGCGGTTCGGGTAAACTCGTTTCTAAGGATCTCAAAGATCTGATTCAACC CAAGGACAAAAACGGAAAAGCTCTGGTTCAAATTCTTAGAAACGGAGTCTATCTTACCACCTTTGCACCGTTAGGTGATG GTCATCCCGTGGATTTGGATGAGGTTTTTAAAAAACTTTCCCTAAAAGGTGTTTCCGGAGAGGACGGCAAGTTGGTCCGC AAAATCGTAAAGGAAGCAAAAGGGGAGCCGATTCTTATCTCTCAACAAAAACCTAGACCGGGGATGGAAGCGAAACTAAT CTTAGATATTTCTCCTGATAAGATGAAAGCAAAAGTCACGATTCTTCCTCCTAGACCCGGTGGAAGGGATTTTGAAGTTA GAGACGTAGTCAATCATCTCAAAAATGCGGGTGTTAAATACGGTTTTAAAGAGGAAGAAATCCAAAGAAAACTCGAAGAA GAATTTTACAACCAACCTTTTATCGGTGCGGAGGGAGATTATCCTATCAATGGTAAAAATGCTCAGATCATCTATCACGT TCGGACCTCTAAAAATATTTCTTTCCGCGAAGACGAATCTGGAAGGGTAGACTTTAAAGATTTGGATCTGATCGAAAACG TAGTAGTGGGTCAACTACTCGCCGAAAAAATTCCTGCAGAAAAAGGAAAATACGGCCGTACTCTTTTTAACGAACTTCTA CCTGCAAAAGACGGGGCAGATACGGACTTAAAACAAGGAAAAGGAACGATTCTTTCCGAGGATAGAAGTAAATTGACTGC GGAAGTAAACGGTCAGGTTGTTTATGCGACCGGAAGGCTTTCTGTGGAAACCGTTTATAGAGTCAACGGAGACGTGGGAA TCAAAACGGGTAACGTTACCTTCCTCGGGTCGATTGTGATTACGGGTAACGTGGAAGATAATTACTCCGTCAAAGCTGCG GGCAATATTGAAATCTACGGAACGGTTCAAAAGGCTCGAGTAGAAGCGGATGGAGACATCATCATTCGCCAAGGAATTTC CGGAAGAGAAGAGGCTCATGTAGAATCCACAGGTGGAAACGTGATCGCTAAATTCATACAGAGTGCCACTGTGATTACAG AAAAAGACGTTATGGTTCAAGAAGGAGTTTTACATTCTTTTGTAAGTGCTGGAGGAAAAATTCTCTGCAATGGAAAACGA GGTCAAATTGTAGGTGGAACGGTTCGGGCTTCTGAATTGATCGCCGCCAGAAGTATTGGTTCTTCCGCAAACCCGGCGAC TGAACTTGTTGTGGGAATTGATCCTAAGGTTCTAAAGCAGATTGCTGATTATGAAGCAAAGATGCATGAAAGTCAGGCCA AACACGAACAAGTTTTCAAAAGTTTGAAAACTCTTCAGGCTAGAAAAGAATCTGATCCGGCTTCTTTTACGGAAGAACAC GAGAATCAGCTTTCTAAAATGCAGAAAGCAGTGGATAAGCTCGATTCTAGAATCAAAGAGTTTGAAACGGAAATTAATAA TCTTAAAAATTACATGGAAGAAAAGTCTTCTCACGGTAAGATCAGTATCGAAAAAGTTCTCTACGGTGGAGTGACTATGA GAATCCGAAACTCTGATTTTAAAACTAGAAACGAGATTAAAAACAAAACCTTCGTAGAAGAAAATGGGATGATTCGCCAA GTTCCTTACGAAGATCCTGAGCCGGACAAAAAAGACTGGAGAAAAAAACGAAATCGTGGTAATTAA
Upstream 100 bases:
>100_bases CAGTTACATACTAGAGCCGTTTCTAGATTGAGAAGTAAACTCGGTAAAGTAAAGTCCGTCATTTCTCGTAAGTAATTTTT GATTTACTAGGACGGAGAAT
Downstream 100 bases:
>100_bases ACCTTAGGATGAGGCTGAGCGATACTTTTTTAGGTTATGGTCAGGCTCCGGATATGATCCGGAAGCAACAGGTGGAAAAT CCTTTCACCATGCCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MGSLIPFLQDQSKELDRIQNEQVEVYGDTLENSLRLAAKHLKKQVHELDYVVLKRGKKKLFGHEPWHIRVSILPEDNFLD ELTELDQKLTGGSGKLVSKDLKDLIQPKDKNGKALVQILRNGVYLTTFAPLGDGHPVDLDEVFKKLSLKGVSGEDGKLVR KIVKEAKGEPILISQQKPRPGMEAKLILDISPDKMKAKVTILPPRPGGRDFEVRDVVNHLKNAGVKYGFKEEEIQRKLEE EFYNQPFIGAEGDYPINGKNAQIIYHVRTSKNISFREDESGRVDFKDLDLIENVVVGQLLAEKIPAEKGKYGRTLFNELL PAKDGADTDLKQGKGTILSEDRSKLTAEVNGQVVYATGRLSVETVYRVNGDVGIKTGNVTFLGSIVITGNVEDNYSVKAA GNIEIYGTVQKARVEADGDIIIRQGISGREEAHVESTGGNVIAKFIQSATVITEKDVMVQEGVLHSFVSAGGKILCNGKR GQIVGGTVRASELIAARSIGSSANPATELVVGIDPKVLKQIADYEAKMHESQAKHEQVFKSLKTLQARKESDPASFTEEH ENQLSKMQKAVDKLDSRIKEFETEINNLKNYMEEKSSHGKISIEKVLYGGVTMRIRNSDFKTRNEIKNKTFVEENGMIRQ VPYEDPEPDKKDWRKKRNRGN
Sequences:
>Translated_661_residues MGSLIPFLQDQSKELDRIQNEQVEVYGDTLENSLRLAAKHLKKQVHELDYVVLKRGKKKLFGHEPWHIRVSILPEDNFLD ELTELDQKLTGGSGKLVSKDLKDLIQPKDKNGKALVQILRNGVYLTTFAPLGDGHPVDLDEVFKKLSLKGVSGEDGKLVR KIVKEAKGEPILISQQKPRPGMEAKLILDISPDKMKAKVTILPPRPGGRDFEVRDVVNHLKNAGVKYGFKEEEIQRKLEE EFYNQPFIGAEGDYPINGKNAQIIYHVRTSKNISFREDESGRVDFKDLDLIENVVVGQLLAEKIPAEKGKYGRTLFNELL PAKDGADTDLKQGKGTILSEDRSKLTAEVNGQVVYATGRLSVETVYRVNGDVGIKTGNVTFLGSIVITGNVEDNYSVKAA GNIEIYGTVQKARVEADGDIIIRQGISGREEAHVESTGGNVIAKFIQSATVITEKDVMVQEGVLHSFVSAGGKILCNGKR GQIVGGTVRASELIAARSIGSSANPATELVVGIDPKVLKQIADYEAKMHESQAKHEQVFKSLKTLQARKESDPASFTEEH ENQLSKMQKAVDKLDSRIKEFETEINNLKNYMEEKSSHGKISIEKVLYGGVTMRIRNSDFKTRNEIKNKTFVEENGMIRQ VPYEDPEPDKKDWRKKRNRGN >Mature_660_residues GSLIPFLQDQSKELDRIQNEQVEVYGDTLENSLRLAAKHLKKQVHELDYVVLKRGKKKLFGHEPWHIRVSILPEDNFLDE LTELDQKLTGGSGKLVSKDLKDLIQPKDKNGKALVQILRNGVYLTTFAPLGDGHPVDLDEVFKKLSLKGVSGEDGKLVRK IVKEAKGEPILISQQKPRPGMEAKLILDISPDKMKAKVTILPPRPGGRDFEVRDVVNHLKNAGVKYGFKEEEIQRKLEEE FYNQPFIGAEGDYPINGKNAQIIYHVRTSKNISFREDESGRVDFKDLDLIENVVVGQLLAEKIPAEKGKYGRTLFNELLP AKDGADTDLKQGKGTILSEDRSKLTAEVNGQVVYATGRLSVETVYRVNGDVGIKTGNVTFLGSIVITGNVEDNYSVKAAG NIEIYGTVQKARVEADGDIIIRQGISGREEAHVESTGGNVIAKFIQSATVITEKDVMVQEGVLHSFVSAGGKILCNGKRG QIVGGTVRASELIAARSIGSSANPATELVVGIDPKVLKQIADYEAKMHESQAKHEQVFKSLKTLQARKESDPASFTEEHE NQLSKMQKAVDKLDSRIKEFETEINNLKNYMEEKSSHGKISIEKVLYGGVTMRIRNSDFKTRNEIKNKTFVEENGMIRQV PYEDPEPDKKDWRKKRNRGN
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73679; Mature: 73548
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00277 STAPH_STREP_TOXIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLIPFLQDQSKELDRIQNEQVEVYGDTLENSLRLAAKHLKKQVHELDYVVLKRGKKKL CCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FGHEPWHIRVSILPEDNFLDELTELDQKLTGGSGKLVSKDLKDLIQPKDKNGKALVQILR CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH NGVYLTTFAPLGDGHPVDLDEVFKKLSLKGVSGEDGKLVRKIVKEAKGEPILISQQKPRP CCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC GMEAKLILDISPDKMKAKVTILPPRPGGRDFEVRDVVNHLKNAGVKYGFKEEEIQRKLEE CCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH EFYNQPFIGAEGDYPINGKNAQIIYHVRTSKNISFREDESGRVDFKDLDLIENVVVGQLL HHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEKIPAEKGKYGRTLFNELLPAKDGADTDLKQGKGTILSEDRSKLTAEVNGQVVYATGRL HHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCEEECCHHHEEEEECCEEEEEECCE SVETVYRVNGDVGIKTGNVTFLGSIVITGNVEDNYSVKAAGNIEIYGTVQKARVEADGDI EEEEEEEECCCEEEEECCEEEEEEEEEECCCCCCEEEEECCCEEEEEEHEEEEECCCCCE IIRQGISGREEAHVESTGGNVIAKFIQSATVITEKDVMVQEGVLHSFVSAGGKILCNGKR EEECCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEECCCC GQIVGGTVRASELIAARSIGSSANPATELVVGIDPKVLKQIADYEAKMHESQAKHEQVFK CCEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SLKTLQARKESDPASFTEEHENQLSKMQKAVDKLDSRIKEFETEINNLKNYMEEKSSHGK HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ISIEKVLYGGVTMRIRNSDFKTRNEIKNKTFVEENGMIRQVPYEDPEPDKKDWRKKRNRG EEEEEEEECCEEEEEECCCCCHHHHHCCCEEECCCCCEEECCCCCCCCCHHHHHHHCCCC N C >Mature Secondary Structure GSLIPFLQDQSKELDRIQNEQVEVYGDTLENSLRLAAKHLKKQVHELDYVVLKRGKKKL CCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FGHEPWHIRVSILPEDNFLDELTELDQKLTGGSGKLVSKDLKDLIQPKDKNGKALVQILR CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH NGVYLTTFAPLGDGHPVDLDEVFKKLSLKGVSGEDGKLVRKIVKEAKGEPILISQQKPRP CCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC GMEAKLILDISPDKMKAKVTILPPRPGGRDFEVRDVVNHLKNAGVKYGFKEEEIQRKLEE CCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH EFYNQPFIGAEGDYPINGKNAQIIYHVRTSKNISFREDESGRVDFKDLDLIENVVVGQLL HHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEKIPAEKGKYGRTLFNELLPAKDGADTDLKQGKGTILSEDRSKLTAEVNGQVVYATGRL HHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCEEECCHHHEEEEECCEEEEEECCE SVETVYRVNGDVGIKTGNVTFLGSIVITGNVEDNYSVKAAGNIEIYGTVQKARVEADGDI EEEEEEEECCCEEEEECCEEEEEEEEEECCCCCCEEEEECCCEEEEEEHEEEEECCCCCE IIRQGISGREEAHVESTGGNVIAKFIQSATVITEKDVMVQEGVLHSFVSAGGKILCNGKR EEECCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEECCCC GQIVGGTVRASELIAARSIGSSANPATELVVGIDPKVLKQIADYEAKMHESQAKHEQVFK CCEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH SLKTLQARKESDPASFTEEHENQLSKMQKAVDKLDSRIKEFETEINNLKNYMEEKSSHGK HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ISIEKVLYGGVTMRIRNSDFKTRNEIKNKTFVEENGMIRQVPYEDPEPDKKDWRKKRNRG EEEEEEEECCEEEEEECCCCCHHHHHCCCEEECCCCCEEECCCCCCCCCHHHHHHHCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA