Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45657260
Identifier: 45657260
GI number: 45657260
Start: 1700635
End: 1700988
Strand: Direct
Name: 45657260
Synonym: LIC11382
Alternate gene names: NA
Gene position: 1700635-1700988 (Clockwise)
Preceding gene: 45657259
Following gene: 45657261
Centisome position: 39.76
GC content: 40.11
Gene sequence:
>354_bases ATGAGGCTGAGCGATACTTTTTTAGGTTATGGTCAGGCTCCGGATATGATCCGGAAGCAACAGGTGGAAAATCCTTTCAC CATGCCTCATATGATCTCCGAAACCTCTCGGGTGGTCAAAGAATATAACGACACACGTAAGTATGCAGTTGAGTTGTATA CAGATGTTTTTTCTCTTTCTCCTGAATCCAGGGAAAGAATGGCTTTGGCAAGAAATCAAAAAATAGATCAGATTAAAGAT CGGTTAAAAACATACAAATCGGCTTCGGACGATAAGTCTTATACGTATTCTTCTAATGGTCAAAAGACGTCTAACGTTCC GTCCAATCGAGGCAAAATCGAATTTTTCGCTTAA
Upstream 100 bases:
>100_bases TAGAAGAAAATGGGATGATTCGCCAAGTTCCTTACGAAGATCCTGAGCCGGACAAAAAAGACTGGAGAAAAAAACGAAAT CGTGGTAATTAAACCTTAGG
Downstream 100 bases:
>100_bases ACTTTTTCCTAAGGAATGTTGTTGGAGACGTGCCGGGGGAAAAGTATGGAACTATTTGCAGTATTTGCGATCAACGCGGT TGTTTCCGTTGTTTTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRLSDTFLGYGQAPDMIRKQQVENPFTMPHMISETSRVVKEYNDTRKYAVELYTDVFSLSPESRERMALARNQKIDQIKD RLKTYKSASDDKSYTYSSNGQKTSNVPSNRGKIEFFA
Sequences:
>Translated_117_residues MRLSDTFLGYGQAPDMIRKQQVENPFTMPHMISETSRVVKEYNDTRKYAVELYTDVFSLSPESRERMALARNQKIDQIKD RLKTYKSASDDKSYTYSSNGQKTSNVPSNRGKIEFFA >Mature_117_residues MRLSDTFLGYGQAPDMIRKQQVENPFTMPHMISETSRVVKEYNDTRKYAVELYTDVFSLSPESRERMALARNQKIDQIKD RLKTYKSASDDKSYTYSSNGQKTSNVPSNRGKIEFFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13575; Mature: 13575
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSDTFLGYGQAPDMIRKQQVENPFTMPHMISETSRVVKEYNDTRKYAVELYTDVFSLS CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PESRERMALARNQKIDQIKDRLKTYKSASDDKSYTYSSNGQKTSNVPSNRGKIEFFA CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MRLSDTFLGYGQAPDMIRKQQVENPFTMPHMISETSRVVKEYNDTRKYAVELYTDVFSLS CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PESRERMALARNQKIDQIKDRLKTYKSASDDKSYTYSSNGQKTSNVPSNRGKIEFFA CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA