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The map label for this gene is dcd [H]

Identifier: 45358989

GI number: 45358989

Start: 1398840

End: 1399460

Strand: Direct

Name: dcd [H]

Synonym: MMP1426

Alternate gene names: 45358989

Gene position: 1398840-1399460 (Clockwise)

Preceding gene: 45358988

Following gene: 45358990

Centisome position: 84.21

GC content: 33.01

Gene sequence:

>621_bases
ATGATATTAAGTGATAAAGACATTTTTAATTATGTTACTTCAAAAAGAGTTTTAATTGAGCCTTTCAACTCAAAATTCGT
TGGACCTTGTTCTTATGACGTTACCCTTGGAAGCGAATTTATAAAATACAACGAAGACGTTTACGATGTTAAAAAAACTC
TAAACCACAGTAAATTTAAAATTGAAAATTCCGTTATGGTGTGTCCCCTAAACCACCACTTGGATGAAACAATAATTAAA
AACTATAAAGAAAAATACAATGTCGACTGTGTTGTGAGTGGAGGACTTTTAGGAACCACTAATGAATACGTAGAACTTCC
AAATGATGTTTGTGCACAGTACCAGGGTAGAAGCAGTTTTGGAAGGGTATTTTTACAAACACACCAAACCGCAGGCTGGA
TTGATTCAGGATTTAAAGGAAAAATAACGTTAGAAATTGTAGCTTATGATAAACCTGTAATTCTTTATAAAAACCAGAGA
GTAGGGCAGTTAATATTTAGTAAAACACTTTCACCAGCAGATATCGGATATTCAGATAGAAAATGCTCAAAATATGCAGG
ACAGACGTCAGTAATGGCATCACTTATTAAAAAAGACTTTGAAACTAATGAGGAGGAATAA

Upstream 100 bases:

>100_bases
ATTCTGAGTATGATGATGCCAAAATAAAAGTAACACCTTCAAAATCCGAAAAGTGTGTTTTTGTAGAAAAGGACTAATCT
AAATCTCTCTGGTGAAATAG

Downstream 100 bases:

>100_bases
AACATGTTCGTTCCAGAGGAAATTATTGAAACAATAAAAATGATTGAATACCAAAATTTAGATATAAGAACTACCACACT
TGGGATCAACTTAAAAGACT

Product: bifunctional dCTP deaminase/dUTP diphosphatase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MILSDKDIFNYVTSKRVLIEPFNSKFVGPCSYDVTLGSEFIKYNEDVYDVKKTLNHSKFKIENSVMVCPLNHHLDETIIK
NYKEKYNVDCVVSGGLLGTTNEYVELPNDVCAQYQGRSSFGRVFLQTHQTAGWIDSGFKGKITLEIVAYDKPVILYKNQR
VGQLIFSKTLSPADIGYSDRKCSKYAGQTSVMASLIKKDFETNEEE

Sequences:

>Translated_206_residues
MILSDKDIFNYVTSKRVLIEPFNSKFVGPCSYDVTLGSEFIKYNEDVYDVKKTLNHSKFKIENSVMVCPLNHHLDETIIK
NYKEKYNVDCVVSGGLLGTTNEYVELPNDVCAQYQGRSSFGRVFLQTHQTAGWIDSGFKGKITLEIVAYDKPVILYKNQR
VGQLIFSKTLSPADIGYSDRKCSKYAGQTSVMASLIKKDFETNEEE
>Mature_206_residues
MILSDKDIFNYVTSKRVLIEPFNSKFVGPCSYDVTLGSEFIKYNEDVYDVKKTLNHSKFKIENSVMVCPLNHHLDETIIK
NYKEKYNVDCVVSGGLLGTTNEYVELPNDVCAQYQGRSSFGRVFLQTHQTAGWIDSGFKGKITLEIVAYDKPVILYKNQR
VGQLIFSKTLSPADIGYSDRKCSKYAGQTSVMASLIKKDFETNEEE

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=202, Percent_Identity=31.1881188118812, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 23388; Mature: 23388

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSDKDIFNYVTSKRVLIEPFNSKFVGPCSYDVTLGSEFIKYNEDVYDVKKTLNHSKFK
CCCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCEEE
IENSVMVCPLNHHLDETIIKNYKEKYNVDCVVSGGLLGTTNEYVELPNDVCAQYQGRSSF
ECCCEEEEECHHCHHHHHHHHHHHHCCCEEEEECCEECCCHHHEECCHHHHHHCCCCCCC
GRVFLQTHQTAGWIDSGFKGKITLEIVAYDKPVILYKNQRVGQLIFSKTLSPADIGYSDR
CEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCC
KCSKYAGQTSVMASLIKKDFETNEEE
HHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MILSDKDIFNYVTSKRVLIEPFNSKFVGPCSYDVTLGSEFIKYNEDVYDVKKTLNHSKFK
CCCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHCCCCEEE
IENSVMVCPLNHHLDETIIKNYKEKYNVDCVVSGGLLGTTNEYVELPNDVCAQYQGRSSF
ECCCEEEEECHHCHHHHHHHHHHHHCCCEEEEECCEECCCHHHEECCHHHHHHCCCCCCC
GRVFLQTHQTAGWIDSGFKGKITLEIVAYDKPVILYKNQRVGQLIFSKTLSPADIGYSDR
CEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCC
KCSKYAGQTSVMASLIKKDFETNEEE
HHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA