Click here to switch to the map view.

The map label for this gene is 45358990

Identifier: 45358990

GI number: 45358990

Start: 1399464

End: 1400840

Strand: Direct

Name: 45358990

Synonym: MMP1427

Alternate gene names: NA

Gene position: 1399464-1400840 (Clockwise)

Preceding gene: 45358989

Following gene: 45358991

Centisome position: 84.25

GC content: 37.76

Gene sequence:

>1377_bases
ATGTTCGTTCCAGAGGAAATTATTGAAACAATAAAAATGATTGAATACCAAAATTTAGATATAAGAACTACCACACTTGG
GATCAACTTAAAAGACTGTGCTGATAAAGATTTAGACCTGTTAAAAGAAAACATTTACGACAAAATAACATCACTTGGCG
GAAATTTAGTCGAAACTGCAAACAAAGTTTCTCAAAAGTATGGTATTCCAATAGTAAACAAGCGAATTTCGGTAACTCCG
ATTGGATTGATTATGGGAAGTACCGTAAAAGGATTGAGTGATGAAGAAGCAGTTGATGCATGCGTTGAAGTTGGAATAAC
ACTTGATAAAATTGCAAAAGAAGTTGGGGTAGACTTTATTGGAGGATATTCCGCATTAGTTCAAAAAAGAGCAACATATG
AAGAAAAAATGCTTATTCGGTCAATTCCAAAATTAATGACCAAAACTGACAAAGTATGTGCATCAGTTAACGTTGCTACA
ACAAAAGCAGGAATTAACATGTACGCTGTTAAAAAAATGGGAGAAATAGTTAAAGAAACTTCAGAGATTACAAAAGATGC
AATTGGATGTGCAAAAATCGTTGTATTTTGTAATGCTCCAGAAGACAACCCATTCATGGCAGGTGCATTCCACGGACCTG
GAGAAGGAGATGCAGTAATTAATGCAGGAGTTTCCGGACCGGGTGTTGTTAGAGCAGTCGTTGAACAGTTGAAAGGAAAA
GATATTGGAACCGTTAGTGATGAAATTAAAAAGACTGCATTTAAAATCACGAGAATGGGTGAACTCGTTGGAAAAGAAGT
TGCTAATGAACTTGGCGTAAACTTTGGTATAGTTGATTTGTCTTTAGCACCAACACCTGCAATTGGAGACAGTATTGCAA
ACATTTTAGAAGCTGTTGGTCTTGAAAGATGCGGAACTCACGGAACTACAGCAGCACTTGCAATGTTAAACGATGCAGTC
AAAAAAGGAGGAGCAATGGCTTCAAGTAATGTTGGAGGACTTAGTGGTGCATTTATTCCAGTAAGTGAAGATGCAGGAAT
GATTGAAGCAGTTGAGGTTGGAGCTTTGAGACTAGAAAAACTTGAAGCAATGACCTGTGTTTGTTCAGTTGGACTTGACA
TGATTGCAGTTCCTGGAAAAACACCTGCTTCAACATTGTCTGCAATTATGGCCGACGAAATGGCAATTGGAATGATAAAC
AAAAAAACTACAGCAGTTAGAATTATCCCAGTTCCTGGAAAAGATGTTGGAGACTATGTAGAATATGGTGGACTCCTTGG
AACAGCTCCAATCATGCCTGTTAGCGAATTTTCTTCCGAAGAACTTATCGAAAGGGGCGGAAGAATACCTGCACCAATTC
AATCCCTTACAAATTAA

Upstream 100 bases:

>100_bases
CGGATATTCAGATAGAAAATGCTCAAAATATGCAGGACAGACGTCAGTAATGGCATCACTTATTAAAAAAGACTTTGAAA
CTAATGAGGAGGAATAAAAC

Downstream 100 bases:

>100_bases
AATGAATACCTAAAAATTTTTAGGAAAGTTTATAAACTTTTAAAACATATACTTTTTAGATAAGGTGATAAAATGGCTAA
AAATCAGGATGCAGGACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MFVPEEIIETIKMIEYQNLDIRTTTLGINLKDCADKDLDLLKENIYDKITSLGGNLVETANKVSQKYGIPIVNKRISVTP
IGLIMGSTVKGLSDEEAVDACVEVGITLDKIAKEVGVDFIGGYSALVQKRATYEEKMLIRSIPKLMTKTDKVCASVNVAT
TKAGINMYAVKKMGEIVKETSEITKDAIGCAKIVVFCNAPEDNPFMAGAFHGPGEGDAVINAGVSGPGVVRAVVEQLKGK
DIGTVSDEIKKTAFKITRMGELVGKEVANELGVNFGIVDLSLAPTPAIGDSIANILEAVGLERCGTHGTTAALAMLNDAV
KKGGAMASSNVGGLSGAFIPVSEDAGMIEAVEVGALRLEKLEAMTCVCSVGLDMIAVPGKTPASTLSAIMADEMAIGMIN
KKTTAVRIIPVPGKDVGDYVEYGGLLGTAPIMPVSEFSSEELIERGGRIPAPIQSLTN

Sequences:

>Translated_458_residues
MFVPEEIIETIKMIEYQNLDIRTTTLGINLKDCADKDLDLLKENIYDKITSLGGNLVETANKVSQKYGIPIVNKRISVTP
IGLIMGSTVKGLSDEEAVDACVEVGITLDKIAKEVGVDFIGGYSALVQKRATYEEKMLIRSIPKLMTKTDKVCASVNVAT
TKAGINMYAVKKMGEIVKETSEITKDAIGCAKIVVFCNAPEDNPFMAGAFHGPGEGDAVINAGVSGPGVVRAVVEQLKGK
DIGTVSDEIKKTAFKITRMGELVGKEVANELGVNFGIVDLSLAPTPAIGDSIANILEAVGLERCGTHGTTAALAMLNDAV
KKGGAMASSNVGGLSGAFIPVSEDAGMIEAVEVGALRLEKLEAMTCVCSVGLDMIAVPGKTPASTLSAIMADEMAIGMIN
KKTTAVRIIPVPGKDVGDYVEYGGLLGTAPIMPVSEFSSEELIERGGRIPAPIQSLTN
>Mature_458_residues
MFVPEEIIETIKMIEYQNLDIRTTTLGINLKDCADKDLDLLKENIYDKITSLGGNLVETANKVSQKYGIPIVNKRISVTP
IGLIMGSTVKGLSDEEAVDACVEVGITLDKIAKEVGVDFIGGYSALVQKRATYEEKMLIRSIPKLMTKTDKVCASVNVAT
TKAGINMYAVKKMGEIVKETSEITKDAIGCAKIVVFCNAPEDNPFMAGAFHGPGEGDAVINAGVSGPGVVRAVVEQLKGK
DIGTVSDEIKKTAFKITRMGELVGKEVANELGVNFGIVDLSLAPTPAIGDSIANILEAVGLERCGTHGTTAALAMLNDAV
KKGGAMASSNVGGLSGAFIPVSEDAGMIEAVEVGALRLEKLEAMTCVCSVGLDMIAVPGKTPASTLSAIMADEMAIGMIN
KKTTAVRIIPVPGKDVGDYVEYGGLLGTAPIMPVSEFSSEELIERGGRIPAPIQSLTN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007841 [H]

Pfam domain/function: PF05167 DUF711 [H]

EC number: NA

Molecular weight: Translated: 48086; Mature: 48086

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVPEEIIETIKMIEYQNLDIRTTTLGINLKDCADKDLDLLKENIYDKITSLGGNLVETA
CCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
NKVSQKYGIPIVNKRISVTPIGLIMGSTVKGLSDEEAVDACVEVGITLDKIAKEVGVDFI
HHHHHHCCCCEECCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHH
GGYSALVQKRATYEEKMLIRSIPKLMTKTDKVCASVNVATTKAGINMYAVKKMGEIVKET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHHHHHH
SEITKDAIGCAKIVVFCNAPEDNPFMAGAFHGPGEGDAVINAGVSGPGVVRAVVEQLKGK
HHHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCC
DIGTVSDEIKKTAFKITRMGELVGKEVANELGVNFGIVDLSLAPTPAIGDSIANILEAVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
LERCGTHGTTAALAMLNDAVKKGGAMASSNVGGLSGAFIPVSEDAGMIEAVEVGALRLEK
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LEAMTCVCSVGLDMIAVPGKTPASTLSAIMADEMAIGMINKKTTAVRIIPVPGKDVGDYV
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHH
EYGGLLGTAPIMPVSEFSSEELIERGGRIPAPIQSLTN
HHCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MFVPEEIIETIKMIEYQNLDIRTTTLGINLKDCADKDLDLLKENIYDKITSLGGNLVETA
CCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
NKVSQKYGIPIVNKRISVTPIGLIMGSTVKGLSDEEAVDACVEVGITLDKIAKEVGVDFI
HHHHHHCCCCEECCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHH
GGYSALVQKRATYEEKMLIRSIPKLMTKTDKVCASVNVATTKAGINMYAVKKMGEIVKET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHHHHHH
SEITKDAIGCAKIVVFCNAPEDNPFMAGAFHGPGEGDAVINAGVSGPGVVRAVVEQLKGK
HHHHHHHHCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCC
DIGTVSDEIKKTAFKITRMGELVGKEVANELGVNFGIVDLSLAPTPAIGDSIANILEAVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
LERCGTHGTTAALAMLNDAVKKGGAMASSNVGGLSGAFIPVSEDAGMIEAVEVGALRLEK
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LEAMTCVCSVGLDMIAVPGKTPASTLSAIMADEMAIGMINKKTTAVRIIPVPGKDVGDYV
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCHHHHH
EYGGLLGTAPIMPVSEFSSEELIERGGRIPAPIQSLTN
HHCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA