Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680831
Identifier: 37680831
GI number: 37680831
Start: 2682353
End: 2683747
Strand: Direct
Name: 37680831
Synonym: VV2647
Alternate gene names: NA
Gene position: 2682353-2683747 (Clockwise)
Preceding gene: 37680830
Following gene: 37680833
Centisome position: 79.96
GC content: 52.47
Gene sequence:
>1395_bases GTGACGCCACCTTCGCCATTTTACACGCGCGCCTTATTGACACTGCTCCTGTTAGGATTGGTGGTCTTTAGTTTTAATCC GTTCCTCGACCGCAACGATCTGCTGCCACTTTACGACAGCAAACGCCTGTTTGTGCTGTTTCTGTTGCAGATCACCACGC TTATCGTGCTGTTTTCCACTCAACAGCGACAGCGCATCATCGATCATTGGTGCTCACTCACGCTCCTCCACCGAGGTTTA CTGAGCCTTTTTATTGCTTCGAGCTTACTGGCCACATGGCTTGCTCGCTATCCGCTGGCCGCTGTTTTGCAATGGTTTTA TTTGGCAGGATTGGTTTTGATGCTGTTTGTACTGCGTGATGTGGTGAAAAAGCAGCAAGCCCGATGGTTTGAATACACTC TTTGGCTCAGTGCGTTTCTGTTTTTGAGCATTGCTCTGGCGTTTTGGATCCGCATTGTGCACCAGTTGAACGTCAACAAC TTCACTCTGTTTGGCTTTGCTAACCCCCGTTTTCTCAACCAGATCCATATTTGGCTCATCTTCCCTGTCGTTTATCTTGC CGCGATAGCGATGAAACGCGGCAAACGTGGCGTGGTGCCAAGAGCGATCCTCGCGATCGATTTCGCCATTTGTTTTTCAA CCGATGCGCGAGGGCCACTGGTGGCCATACTGGGTGGATTCACGCTGCTGATGCTTTGCGCCAGAGATCTGCGCTCTATT TGGTGGAAACTGTTGTGGCAAAGCGCTGTGGCTGGCGCATTGGTGAAACTCGCGCTGCTTTCCCCACTTCCCAGCATGAT TTTTGGTGGGCCGATTGAGTGGCTCAACATTCGAACAGAGAGCTCCGGACGCTTAGCGCTGTGGCGACACTCTTGGCAAA TCTTCACCTTTACCGGATTGGGCGGGGATGCGTTTGTCTGTGAAGAGGTCAACCACGGTCGGCCACACAACTCTCTTCTC AACGTGTTGGTGCATTGGGGCGTGGTGTCCGCTCTGTGCTACCTAGCGTTGATCGCCTCACTGTTGCACCTCACCATCAG GCAGCGTTTGTTACGCACTAAGTTGCTTGGCGTCAGCCTGCTCAGCGGCATCGCGTACAGCTTGGTGTCTGGGGTGCTCG ATTCACCTTTAAGTCAACTGATGGCGGTTGTCGCCTGCGCACTATTTTGGTCACGTTGCTCGCTTGCGTCTGCTTCATTA CCATTGCCAGCCAACAAACCACGCCGATGGTGGGCGCACGGCGTGATACTGATTATCGCTATCGGTTGCAGTGTGTCGGT CGGTTATCGCGCCTTGGAGCGATTGGACAATTATCCGGTTTACCGCAGCGAGGTGATCATCAAAACGCAATTCTGGTTGG GGTATAACTGCTTAGCGAAATCTTGGCAGCCTTAA
Upstream 100 bases:
>100_bases TGGCTGCCAAGCCAAGGGCATTTTTTATAAAAAACCAAGCAAAACCAGTCACTAAGACTAGACTCTAAATATCGCTGATC GTTTTAAAGGGCTCTATGGA
Downstream 100 bases:
>100_bases TGGATTTGCTGGCAAATCACCTCACGTAACCACATACCCTTTTCGCTGTTGCCAGTGACGCTATGCCACACCAACGAGAT ATCAAAATCCGCCACCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGL LSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNN FTLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI WWKLLWQSAVAGALVKLALLSPLPSMIFGGPIEWLNIRTESSGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLL NVLVHWGVVSALCYLALIASLLHLTIRQRLLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASL PLPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP
Sequences:
>Translated_464_residues MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGL LSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNN FTLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI WWKLLWQSAVAGALVKLALLSPLPSMIFGGPIEWLNIRTESSGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLL NVLVHWGVVSALCYLALIASLLHLTIRQRLLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASL PLPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP >Mature_463_residues TPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFSTQQRQRIIDHWCSLTLLHRGLL SLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRDVVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNF TLFGFANPRFLNQIHIWLIFPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSIW WKLLWQSAVAGALVKLALLSPLPSMIFGGPIEWLNIRTESSGRLALWRHSWQIFTFTGLGGDAFVCEEVNHGRPHNSLLN VLVHWGVVSALCYLALIASLLHLTIRQRLLRTKLLGVSLLSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLP LPANKPRRWWAHGVILIIAIGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52494; Mature: 52363
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFST CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC QQRQRIIDHWCSLTLLHRGLLSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNFTLFGFANPRFLNQIHIWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH FPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH WWKLLWQSAVAGALVKLALLSPLPSMIFGGPIEWLNIRTESSGRLALWRHSWQIFTFTGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCEEEEEECEEEEEEECC GGDAFVCEEVNHGRPHNSLLNVLVHWGVVSALCYLALIASLLHLTIRQRLLRTKLLGVSL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLPLPANKPRRWWAHGVILIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEE IGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP ECCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCC >Mature Secondary Structure TPPSPFYTRALLTLLLLGLVVFSFNPFLDRNDLLPLYDSKRLFVLFLLQITTLIVLFST CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC QQRQRIIDHWCSLTLLHRGLLSLFIASSLLATWLARYPLAAVLQWFYLAGLVLMLFVLRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVKKQQARWFEYTLWLSAFLFLSIALAFWIRIVHQLNVNNFTLFGFANPRFLNQIHIWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH FPVVYLAAIAMKRGKRGVVPRAILAIDFAICFSTDARGPLVAILGGFTLLMLCARDLRSI HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH WWKLLWQSAVAGALVKLALLSPLPSMIFGGPIEWLNIRTESSGRLALWRHSWQIFTFTGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCEEEEEECEEEEEEECC GGDAFVCEEVNHGRPHNSLLNVLVHWGVVSALCYLALIASLLHLTIRQRLLRTKLLGVSL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGIAYSLVSGVLDSPLSQLMAVVACALFWSRCSLASASLPLPANKPRRWWAHGVILIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEE IGCSVSVGYRALERLDNYPVYRSEVIIKTQFWLGYNCLAKSWQP ECCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA