Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680833
Identifier: 37680833
GI number: 37680833
Start: 2684742
End: 2685893
Strand: Direct
Name: 37680833
Synonym: VV2649
Alternate gene names: NA
Gene position: 2684742-2685893 (Clockwise)
Preceding gene: 37680831
Following gene: 37680840
Centisome position: 80.03
GC content: 53.04
Gene sequence:
>1152_bases ATGTACAACATGCTGCAAATTTTTAAGACTTTTTTCTGGCTCGGCTGGATCAGCTTTGGCGGTCCTGCTGCGCACATTGG CTATTTCCGCCACACCTTTGTTGAAAAATTGAAATGGATTAGCGACGAAGAATACGCTCAGTTGGTTGCACTGAGCCAGT TTCTGCCTGGCCCAGGATCAAGCCAAGTCGGCTTTGGCTTAGGCTACAAAAAAGGCGGCCTACCCGGCGCTTGCGCGGCA TTCTTAGGCTTTACCCTGCCTTCGGTGGTGATCATGTTGCTACTGGCGCTGGTTAGCAGCCAAGTCACCGACACCGCACT GTTTCAAAATGTCGTACACGGCTTAAAACTGCTCGCCGTGGTGGTGGTGGCCGATGCGGCTTGGGGCATGTATAAAAACT TTTGCCGCTCGCCGCTGACCGTTGGCATCTGCGTGGCCACCGCTGTCGCCTTATTGGTGTTCTCAGGCATCGCCACGCAA ATGGCTGTGCTGATCCTAGCGGCGCTGATTGGGGTGATTGCGCTCAAAGGTGAAAACAAAGCCACTGAGCACAGCTTTAA ACCATCGCTAACCCCACTACTGACCTTTGCTGCTCTGTTGCTGCTGTTACCGCTACTCGCCACTACTCAGCCGTTGGTAC GACTGTTCAACGAATTCTACCAAGCAGGCAGCTTGGTATTTGGTGGCGGACATGTGGTGCTGCCTTTGCTGCAAAACATC GTGGGAGAGCAAATCAGCCAAGATGCGTTTCTAACTGGTTACGCTGCCGCGCAAGCGGTTCCGGGGCCGATGTTTACCTT CGCCACTTATATTGGTTATGTACTGCATCCAAGTTCACCCATTCTTGGCGCGATTGTTGCGACTTTGGCGGTGTTTTTAC CCGGATTCTTGTTGATGCTCGGCGTGCTGAAAAACTGGCAGCTGTTAGCCGCTAATCCTCGCGTTTCGGGAGCATTGCAA GGGGTCAATGCTGCGGTGGTTGGCTTGCTGGTCGCCGCGTTGTATCAACCGGTCTTTAGCAGCGCCGTGAGCAGTGGGCT GGATGTCGGTTTGATTCTCATTGGCTTCTATCTGCAAAAGCAGATCAAAGTGCCTATCTTGGCTCTGGTGCTGTTTTTCA TGCTCTCTGGAGCCACGCTGGGCATGCTGTAA
Upstream 100 bases:
>100_bases TCGTCCACACTTCATCCCATACAATTCATACAAATCATGAAAACTATCAATTTGAATCATTATAGGTTCTTTCGTAGAGT GAGCTCACCTTTTTGTTGAG
Downstream 100 bases:
>100_bases TCGTGGCATGCGCCACTTCGAATGCCACGTTTTTAGAGACTACAGTTTCTAAATACTGCTGTTTCTAAATGCTACTGTTT CTCGGTACAAGCATTCTAGA
Product: chromate transport protein ChrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MYNMLQIFKTFFWLGWISFGGPAAHIGYFRHTFVEKLKWISDEEYAQLVALSQFLPGPGSSQVGFGLGYKKGGLPGACAA FLGFTLPSVVIMLLLALVSSQVTDTALFQNVVHGLKLLAVVVVADAAWGMYKNFCRSPLTVGICVATAVALLVFSGIATQ MAVLILAALIGVIALKGENKATEHSFKPSLTPLLTFAALLLLLPLLATTQPLVRLFNEFYQAGSLVFGGGHVVLPLLQNI VGEQISQDAFLTGYAAAQAVPGPMFTFATYIGYVLHPSSPILGAIVATLAVFLPGFLLMLGVLKNWQLLAANPRVSGALQ GVNAAVVGLLVAALYQPVFSSAVSSGLDVGLILIGFYLQKQIKVPILALVLFFMLSGATLGML
Sequences:
>Translated_383_residues MYNMLQIFKTFFWLGWISFGGPAAHIGYFRHTFVEKLKWISDEEYAQLVALSQFLPGPGSSQVGFGLGYKKGGLPGACAA FLGFTLPSVVIMLLLALVSSQVTDTALFQNVVHGLKLLAVVVVADAAWGMYKNFCRSPLTVGICVATAVALLVFSGIATQ MAVLILAALIGVIALKGENKATEHSFKPSLTPLLTFAALLLLLPLLATTQPLVRLFNEFYQAGSLVFGGGHVVLPLLQNI VGEQISQDAFLTGYAAAQAVPGPMFTFATYIGYVLHPSSPILGAIVATLAVFLPGFLLMLGVLKNWQLLAANPRVSGALQ GVNAAVVGLLVAALYQPVFSSAVSSGLDVGLILIGFYLQKQIKVPILALVLFFMLSGATLGML >Mature_383_residues MYNMLQIFKTFFWLGWISFGGPAAHIGYFRHTFVEKLKWISDEEYAQLVALSQFLPGPGSSQVGFGLGYKKGGLPGACAA FLGFTLPSVVIMLLLALVSSQVTDTALFQNVVHGLKLLAVVVVADAAWGMYKNFCRSPLTVGICVATAVALLVFSGIATQ MAVLILAALIGVIALKGENKATEHSFKPSLTPLLTFAALLLLLPLLATTQPLVRLFNEFYQAGSLVFGGGHVVLPLLQNI VGEQISQDAFLTGYAAAQAVPGPMFTFATYIGYVLHPSSPILGAIVATLAVFLPGFLLMLGVLKNWQLLAANPRVSGALQ GVNAAVVGLLVAALYQPVFSSAVSSGLDVGLILIGFYLQKQIKVPILALVLFFMLSGATLGML
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 40567; Mature: 40567
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNMLQIFKTFFWLGWISFGGPAAHIGYFRHTFVEKLKWISDEEYAQLVALSQFLPGPGS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC SQVGFGLGYKKGGLPGACAAFLGFTLPSVVIMLLLALVSSQVTDTALFQNVVHGLKLLAV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVADAAWGMYKNFCRSPLTVGICVATAVALLVFSGIATQMAVLILAALIGVIALKGENK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATEHSFKPSLTPLLTFAALLLLLPLLATTQPLVRLFNEFYQAGSLVFGGGHVVLPLLQNI CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH VGEQISQDAFLTGYAAAQAVPGPMFTFATYIGYVLHPSSPILGAIVATLAVFLPGFLLML HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVLKNWQLLAANPRVSGALQGVNAAVVGLLVAALYQPVFSSAVSSGLDVGLILIGFYLQK HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QIKVPILALVLFFMLSGATLGML HHCHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MYNMLQIFKTFFWLGWISFGGPAAHIGYFRHTFVEKLKWISDEEYAQLVALSQFLPGPGS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC SQVGFGLGYKKGGLPGACAAFLGFTLPSVVIMLLLALVSSQVTDTALFQNVVHGLKLLAV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVADAAWGMYKNFCRSPLTVGICVATAVALLVFSGIATQMAVLILAALIGVIALKGENK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ATEHSFKPSLTPLLTFAALLLLLPLLATTQPLVRLFNEFYQAGSLVFGGGHVVLPLLQNI CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH VGEQISQDAFLTGYAAAQAVPGPMFTFATYIGYVLHPSSPILGAIVATLAVFLPGFLLML HHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GVLKNWQLLAANPRVSGALQGVNAAVVGLLVAALYQPVFSSAVSSGLDVGLILIGFYLQK HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QIKVPILALVLFFMLSGATLGML HHCHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]