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The map label for this gene is ygjK [H]

Identifier: 37680830

GI number: 37680830

Start: 2679847

End: 2682213

Strand: Direct

Name: ygjK [H]

Synonym: VV2646

Alternate gene names: 37680830

Gene position: 2679847-2682213 (Clockwise)

Preceding gene: 37680829

Following gene: 37680831

Centisome position: 79.89

GC content: 52.51

Gene sequence:

>2367_bases
ATGAAGATGAAACCCCTTATTGCTGCTATGACTCTGGCAATGCTAACTGCTGGCTGCTCAACCACCACCACCGACGCACC
ACTGCGTGCTTCGCAGTTTAAAAATGTGATCGACCGCAGTGGTTCTCCTGAATACATGCGCGATTACGACTTTGATGATC
ACCAACGCTTTAATCCATTTTTCGATATGGGCGCATGGCACGGCCACCTATTGCCTGACAATGCAGAAGGCATGGGCGGC
TTCCCCGGTACAGCACTTTTGACGGAAGAATACATCAACTTTATGGCCAATAACTTTGACCGCCTGAGTGTGTTTAAAGA
TGGCAAGCAAGTTGAATTTACGATGGAAGCCTACAGCCTTCCGGGCGCGTTAGTGCAAAAACTGACGGCCGATGAGGTAA
CCGTCGAAATGACGCTGCGTTTTGTCTCAAATCGCACCTCATTGCTAGAAACCCACATCATCACGGATTCGCCGCTCGAA
CTGGTTTGGGATGGTCAGTTGTTGGAGCAATACCATGCCAAAGAGGGCAAATCGCAATCCGATAAAACCATCGACGAGCA
ATACCCAGATTACAACCGCACTCTCGTTGCCACCGATGACGGATTGACCGTGACATTTGGCAAAGTGCGCTCAACCTGGG
ATCTGCTGACCTCTGGTGAGTCTGAGTACCAAATCCACAAATCCGTGAAGATGAACACTCAAGTAAATGGCCACCAATTT
ACTTCGACGGCGAAAATCAACGCTTCTACCAAGATTTACACCACCTACTCTCATGTGCTGACGGCCAAAGAAAATCAAGC
TGAACAAGCGAAGATTCAAGACATCTTGGCCAATCCAGAGGCTTACCTTTCGGCGTCTGAGCAGCGTTGGGAAGGGTATC
TCACCCAAGGTTTAACCAATCCGCACGCCACATCAGAGCAAGAACGGGTGGCGGTGAAAGCAATGGAAACATTGAACGGC
AACTGGCGCGGCGTTGCTGGGGCGATGAAGTTTGACTCGGTGACGCCATCAGTGACCGCACGTTGGTTCTCTGGCAACCA
AACTTGGCCTTGGGACAGTTGGAAACAAGCCTACGCCATGGCGCATTTCAACCCTGATGTGGCGAAGAACAACATCCGCG
CGATGTTCGCTTACCAGATACAAGCCGATGATGCGGTTCGTCCTTGGGATGTTGGCTATGTGCCCGATTTGCTGGCGTAT
AACCTCAGCCCAGAACGCGGCGGCGATGGCGGCAACTGGAATGAACGCAACACCAAACCCAGCCTTGCAGCATGGGCGGT
GATGGAAGTGTACAAGACGACCCAAGACAAAGCGTGGCTTGAAGAGATGTACCCGAAACTGGTCGCTTACCACGATTGGT
GGCTACGTAATCGAGACCACAATGGCAATGGCGTACCTGAGTATGGCGCGGCACGCGACAAAGCCCACAATAACGCCGCT
GGAGAGATGTACTTTGAGGTCATCAAAGGCGATCGCACCACCACCATCACTGGCCAAGCGGCGTATGAGAAAGTGCTCAA
GCAAGGCGATTACGATCGCATTGAAAGCCCAGCACAAACGGCGGCCTCTTGGGAGTCGGGTCGAGACGATGCGGCGGTAT
TTGGCTTCATCGACCAAGATCAGCTCGAAACCTACCTTGCCAATGGCGGCCAGCGCTCAGATTGGGTGGTGAAGTTCGCG
CAAAACCGCGCGGAAGATGGCACCTTACTGGGTTACTCGCTACTGCAAGAATCGGTAGACCAAGCCAGTTACATGTACAG
TGACAACCAATATCTGGCGGAAATGGCCGATCTTCTTGGCAAGCCAGAGCAAGCAAAAACGTTTCGCGCCAAAGCAGACA
AGCTTGCTGACTACATCAACACTTGTATGTTTGATGAGAGCACGGGATTCTTTTACGACATTCGCATTGAAGACCAACCA
CTGGCTAACGGCTGTGCAGGCAAACCCATTGTCGAGCGTGGCAAAGGGCCGGAAGGTTGGTCACCGCTCTTTAATGGCGC
AGCAACCCAAGCGCACGCCGATGCGGTGGTGAAAGTGATGAAAGATCCGCAAGAGTTCAACAGCTATGTGCCATTAGGCA
CGGCGGCGCTGTCTAGCCCGGCATTTGGCCCCGACATTTACTGGCGTGGACGCGTTTGGGTCGATCAATTCTACTTTGGC
TTAAAAGGCATGGAGCGATACGGCTATCGCCAAGATGCGGTGGCGATGGCCAGCGCCTTCTTCAACCATGCTGACGGCTT
AGTGCAAGACGGCCCAATTCGTGAGAACTACAACCCGCTCACGGGTGAGCAGCAAGGCGCGCCAAACTTCTCTTGGAGTG
CGGCGCACTTGTACATGCTGTACAACGATTTCTTTACTGCTGAATAA

Upstream 100 bases:

>100_bases
AAGAGACCGAGCACACCATCTCGCAAACTCAATAACGCAAATAACAAAAGCGCCAATCCCCTTTGGCGCTTAACCCTTTT
CTCCTATCAGAGACTTTTCT

Downstream 100 bases:

>100_bases
GTATTACTGCCAGCTAAAACCAACCAGCGACAATGCCCTTGGCTGCCAAGCCAAGGGCATTTTTTATAAAAAACCAAGCA
AAACCAGTCACTAAGACTAG

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 788; Mature: 788

Protein sequence:

>788_residues
MKMKPLIAAMTLAMLTAGCSTTTTDAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPFFDMGAWHGHLLPDNAEGMGG
FPGTALLTEEYINFMANNFDRLSVFKDGKQVEFTMEAYSLPGALVQKLTADEVTVEMTLRFVSNRTSLLETHIITDSPLE
LVWDGQLLEQYHAKEGKSQSDKTIDEQYPDYNRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQF
TSTAKINASTKIYTTYSHVLTAKENQAEQAKIQDILANPEAYLSASEQRWEGYLTQGLTNPHATSEQERVAVKAMETLNG
NWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAMAHFNPDVAKNNIRAMFAYQIQADDAVRPWDVGYVPDLLAY
NLSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAA
GEMYFEVIKGDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQDQLETYLANGGQRSDWVVKFA
QNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLGKPEQAKTFRAKADKLADYINTCMFDESTGFFYDIRIEDQP
LANGCAGKPIVERGKGPEGWSPLFNGAATQAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFG
LKGMERYGYRQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYMLYNDFFTAE

Sequences:

>Translated_788_residues
MKMKPLIAAMTLAMLTAGCSTTTTDAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPFFDMGAWHGHLLPDNAEGMGG
FPGTALLTEEYINFMANNFDRLSVFKDGKQVEFTMEAYSLPGALVQKLTADEVTVEMTLRFVSNRTSLLETHIITDSPLE
LVWDGQLLEQYHAKEGKSQSDKTIDEQYPDYNRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQF
TSTAKINASTKIYTTYSHVLTAKENQAEQAKIQDILANPEAYLSASEQRWEGYLTQGLTNPHATSEQERVAVKAMETLNG
NWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAMAHFNPDVAKNNIRAMFAYQIQADDAVRPWDVGYVPDLLAY
NLSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAA
GEMYFEVIKGDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQDQLETYLANGGQRSDWVVKFA
QNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLGKPEQAKTFRAKADKLADYINTCMFDESTGFFYDIRIEDQP
LANGCAGKPIVERGKGPEGWSPLFNGAATQAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFG
LKGMERYGYRQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYMLYNDFFTAE
>Mature_788_residues
MKMKPLIAAMTLAMLTAGCSTTTTDAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPFFDMGAWHGHLLPDNAEGMGG
FPGTALLTEEYINFMANNFDRLSVFKDGKQVEFTMEAYSLPGALVQKLTADEVTVEMTLRFVSNRTSLLETHIITDSPLE
LVWDGQLLEQYHAKEGKSQSDKTIDEQYPDYNRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQF
TSTAKINASTKIYTTYSHVLTAKENQAEQAKIQDILANPEAYLSASEQRWEGYLTQGLTNPHATSEQERVAVKAMETLNG
NWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAMAHFNPDVAKNNIRAMFAYQIQADDAVRPWDVGYVPDLLAY
NLSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAA
GEMYFEVIKGDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQDQLETYLANGGQRSDWVVKFA
QNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLGKPEQAKTFRAKADKLADYINTCMFDESTGFFYDIRIEDQP
LANGCAGKPIVERGKGPEGWSPLFNGAATQAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFG
LKGMERYGYRQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYMLYNDFFTAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=785, Percent_Identity=73.6305732484076, Blast_Score=1247, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 88469; Mature: 88469

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKPLIAAMTLAMLTAGCSTTTTDAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCH
FDMGAWHGHLLPDNAEGMGGFPGTALLTEEYINFMANNFDRLSVFKDGKQVEFTMEAYSL
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHCC
PGALVQKLTADEVTVEMTLRFVSNRTSLLETHIITDSPLELVWDGQLLEQYHAKEGKSQS
CHHHHHHHHHCCEEHHHHHHHHHCCHHHHHEEEECCCCCEEEECHHHHHHHHHHCCCCCC
DKTIDEQYPDYNRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQF
CCCHHHHCCCCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCEEEEHEEEECCCCCCCEE
TSTAKINASTKIYTTYSHVLTAKENQAEQAKIQDILANPEAYLSASEQRWEGYLTQGLTN
ECEEEECCCEEEEEEHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCC
PHATSEQERVAVKAMETLNGNWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAM
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
AHFNPDVAKNNIRAMFAYQIQADDAVRPWDVGYVPDLLAYNLSPERGGDGGNWNERNTKP
HCCCCCHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
SLAAWAVMEVYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCH
GEMYFEVIKGDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQD
HHHHHHHHCCCCEEEEECHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCEEEECCCHH
QLETYLANGGQRSDWVVKFAQNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLG
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHC
KPEQAKTFRAKADKLADYINTCMFDESTGFFYDIRIEDQPLANGCAGKPIVERGKGPEGW
CCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCC
SPLFNGAATQAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFG
CHHHCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHH
LKGMERYGYRQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYML
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YNDFFTAE
EHHHHCCC
>Mature Secondary Structure
MKMKPLIAAMTLAMLTAGCSTTTTDAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCH
FDMGAWHGHLLPDNAEGMGGFPGTALLTEEYINFMANNFDRLSVFKDGKQVEFTMEAYSL
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHCC
PGALVQKLTADEVTVEMTLRFVSNRTSLLETHIITDSPLELVWDGQLLEQYHAKEGKSQS
CHHHHHHHHHCCEEHHHHHHHHHCCHHHHHEEEECCCCCEEEECHHHHHHHHHHCCCCCC
DKTIDEQYPDYNRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQF
CCCHHHHCCCCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCEEEEHEEEECCCCCCCEE
TSTAKINASTKIYTTYSHVLTAKENQAEQAKIQDILANPEAYLSASEQRWEGYLTQGLTN
ECEEEECCCEEEEEEHHHHEECCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCC
PHATSEQERVAVKAMETLNGNWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAM
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
AHFNPDVAKNNIRAMFAYQIQADDAVRPWDVGYVPDLLAYNLSPERGGDGGNWNERNTKP
HCCCCCHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
SLAAWAVMEVYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCH
GEMYFEVIKGDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQD
HHHHHHHHCCCCEEEEECHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCEEEECCCHH
QLETYLANGGQRSDWVVKFAQNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLG
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHC
KPEQAKTFRAKADKLADYINTCMFDESTGFFYDIRIEDQPLANGCAGKPIVERGKGPEGW
CCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCC
SPLFNGAATQAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFG
CHHHCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHH
LKGMERYGYRQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYML
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YNDFFTAE
EHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]