Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yfgD [H]
Identifier: 37680693
GI number: 37680693
Start: 2540239
End: 2540601
Strand: Direct
Name: yfgD [H]
Synonym: VV2509
Alternate gene names: 37680693
Gene position: 2540239-2540601 (Clockwise)
Preceding gene: 37680692
Following gene: 37680694
Centisome position: 75.73
GC content: 45.45
Gene sequence:
>363_bases ATGGAGAATCCTATGTCAGTCGTGATTTATCACAATCCACGCTGCTCAAAGAGCCGTCAAACCCTCGAACTATTGGAACA ACATGGCGTGACGCCTGAAGTGGTGAAGTACCTTGAAACGCCATTGAATGTAGAACAACTCAAGGCCCTCTACGCTCAAT TGGGCTTTTCCTCTGTCCGTGACATGATGCGTACAAAAGAAGACTTGTATAAATCGCTCTCTTTAGGTGATGACAAGATC ACTGACGAACAACTGTTTAATGCGATGGCAGAAAACCCATCACTTTTTGAACGCCCTGTCGTGGTTGCTAATGGCCAAGC TCGTATTGGTCGCCCACCAGAGCAAGTATTAGAGATTTTGTAA
Upstream 100 bases:
>100_bases CAACTGGCCGAGTTAGGGAGTTTGCAGCAGGCAAGATACGACGCGCGCATTGACCAACTCATGGTCCAACGAGATCGCTT CCTCGCATTACAATAAATAC
Downstream 100 bases:
>100_bases TTGTCAGTGACTACTCAGCTGTTGGTGCTGTACTACAGCCGTCACGGAAAAACCAAATTACTTGCTCGCCAAATTGCCCG GGGAATTGAATCCATTCCCC
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MENPMSVVIYHNPRCSKSRQTLELLEQHGVTPEVVKYLETPLNVEQLKALYAQLGFSSVRDMMRTKEDLYKSLSLGDDKI TDEQLFNAMAENPSLFERPVVVANGQARIGRPPEQVLEIL
Sequences:
>Translated_120_residues MENPMSVVIYHNPRCSKSRQTLELLEQHGVTPEVVKYLETPLNVEQLKALYAQLGFSSVRDMMRTKEDLYKSLSLGDDKI TDEQLFNAMAENPSLFERPVVVANGQARIGRPPEQVLEIL >Mature_120_residues MENPMSVVIYHNPRCSKSRQTLELLEQHGVTPEVVKYLETPLNVEQLKALYAQLGFSSVRDMMRTKEDLYKSLSLGDDKI TDEQLFNAMAENPSLFERPVVVANGQARIGRPPEQVLEIL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=114, Percent_Identity=63.1578947368421, Blast_Score=154, Evalue=2e-39, Organism=Escherichia coli, GI1789918, Length=115, Percent_Identity=43.4782608695652, Blast_Score=100, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13646; Mature: 13646
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENPMSVVIYHNPRCSKSRQTLELLEQHGVTPEVVKYLETPLNVEQLKALYAQLGFSSVR CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHH DMMRTKEDLYKSLSLGDDKITDEQLFNAMAENPSLFERPVVVANGQARIGRPPEQVLEIL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCHHHHHHHC >Mature Secondary Structure MENPMSVVIYHNPRCSKSRQTLELLEQHGVTPEVVKYLETPLNVEQLKALYAQLGFSSVR CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHH DMMRTKEDLYKSLSLGDDKITDEQLFNAMAENPSLFERPVVVANGQARIGRPPEQVLEIL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]