Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680399
Identifier: 37680399
GI number: 37680399
Start: 2233016
End: 2233879
Strand: Direct
Name: 37680399
Synonym: VV2215
Alternate gene names: NA
Gene position: 2233016-2233879 (Clockwise)
Preceding gene: 37680384
Following gene: 37680402
Centisome position: 66.57
GC content: 41.67
Gene sequence:
>864_bases ATGATGAGCAAATGGCCAATACGTTGGGATCTATTGTTCCGCTACAGAATGATAGAGGTTATCGCGCTGTGGGAAGGACG GTTAACAACTAATCACCTGATTAAGAGCTTCGGTATTGGCAGACAGCAAGCATCGAAAGACATCAACACCTATCTAGCCG ATATCGCTCCAGGAAACCTTGTTTATGATAAACAACTGAAAGGCTACAAGCCCAGTGATAGCTTTATCCCACAAGTAACA AAAGGTCATGCTGATGAATATTTGCACATTCTTTCAAGAAGTGAAGATATGACTATCACATTTAAAGAACTCGATATGGG GTTTGAGAATGTTTCAATGATCCGCCCTGTGACTCGCAATATATCACCACAAGTCTTGCGTCCTTTAGTTCAAGCTATTA GAGAGAAAAAACGTGTCGATATAAGCTACACATCTCTCAAAGACGGTATTGAAGTTGAACGGATTATCTCTCCACATACC CTCGTTTGCACACCTCTACGCTGGCATGTTCGGGCCTATTGTGAACATGCGAATGATTATCGTGATTTTGTGCTCAGCCG TATAAGAGGGATTCCATGCCTTGAGGCCAAAAGAGTAAAAGCAAGAGAGCATGACGAGTTATGGAATACTCCCCTCACAG TTGATTTAAAGCCTGACCCACGACTAACAGAAGTTCAAGCCAATGTCGTTGAGCATGATTACGGTATGGAAAAAGGTACA CTCACAATACCAACCAATGCTGCGTTGGTTCGCTATGTTCTCGATGCCTATAATATCGATATTAATGTATTGGATTCGAA TCCTAAAGGTCAGCAGATTATTGTGGCTAACTTTGAGGAGCTAAAACAGTACTTATACTTCTAA
Upstream 100 bases:
>100_bases CATCAACTTGACGATGAAACACTCAATCAATAATATGTCGCCATTGATTACAGGTAAATACTGAATACATACACACGTCG CATAAATAGACAGGAGTTAG
Downstream 100 bases:
>100_bases CTTCAAACACATTGGTGACAAAGACATGTCTGGATAAGTACCAAAGGAAAGATAAGTGATTTTGTCCTGACCAGGTCGTT TATAACGAAACTGCCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MMSKWPIRWDLLFRYRMIEVIALWEGRLTTNHLIKSFGIGRQQASKDINTYLADIAPGNLVYDKQLKGYKPSDSFIPQVT KGHADEYLHILSRSEDMTITFKELDMGFENVSMIRPVTRNISPQVLRPLVQAIREKKRVDISYTSLKDGIEVERIISPHT LVCTPLRWHVRAYCEHANDYRDFVLSRIRGIPCLEAKRVKAREHDELWNTPLTVDLKPDPRLTEVQANVVEHDYGMEKGT LTIPTNAALVRYVLDAYNIDINVLDSNPKGQQIIVANFEELKQYLYF
Sequences:
>Translated_287_residues MMSKWPIRWDLLFRYRMIEVIALWEGRLTTNHLIKSFGIGRQQASKDINTYLADIAPGNLVYDKQLKGYKPSDSFIPQVT KGHADEYLHILSRSEDMTITFKELDMGFENVSMIRPVTRNISPQVLRPLVQAIREKKRVDISYTSLKDGIEVERIISPHT LVCTPLRWHVRAYCEHANDYRDFVLSRIRGIPCLEAKRVKAREHDELWNTPLTVDLKPDPRLTEVQANVVEHDYGMEKGT LTIPTNAALVRYVLDAYNIDINVLDSNPKGQQIIVANFEELKQYLYF >Mature_287_residues MMSKWPIRWDLLFRYRMIEVIALWEGRLTTNHLIKSFGIGRQQASKDINTYLADIAPGNLVYDKQLKGYKPSDSFIPQVT KGHADEYLHILSRSEDMTITFKELDMGFENVSMIRPVTRNISPQVLRPLVQAIREKKRVDISYTSLKDGIEVERIISPHT LVCTPLRWHVRAYCEHANDYRDFVLSRIRGIPCLEAKRVKAREHDELWNTPLTVDLKPDPRLTEVQANVVEHDYGMEKGT LTIPTNAALVRYVLDAYNIDINVLDSNPKGQQIIVANFEELKQYLYF
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33318; Mature: 33318
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSKWPIRWDLLFRYRMIEVIALWEGRLTTNHLIKSFGIGRQQASKDINTYLADIAPGNL CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE VYDKQLKGYKPSDSFIPQVTKGHADEYLHILSRSEDMTITFKELDMGFENVSMIRPVTRN EECCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHC ISPQVLRPLVQAIREKKRVDISYTSLKDGIEVERIISPHTLVCTPLRWHVRAYCEHANDY CCHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEEHHCCCCEEEECCHHHHHHHHHHHCCHH RDFVLSRIRGIPCLEAKRVKAREHDELWNTPLTVDLKPDPRLTEVQANVVEHDYGMEKGT HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCE LTIPTNAALVRYVLDAYNIDINVLDSNPKGQQIIVANFEELKQYLYF EECCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHHHHHHCC >Mature Secondary Structure MMSKWPIRWDLLFRYRMIEVIALWEGRLTTNHLIKSFGIGRQQASKDINTYLADIAPGNL CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE VYDKQLKGYKPSDSFIPQVTKGHADEYLHILSRSEDMTITFKELDMGFENVSMIRPVTRN EECCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHC ISPQVLRPLVQAIREKKRVDISYTSLKDGIEVERIISPHTLVCTPLRWHVRAYCEHANDY CCHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEEHHCCCCEEEECCHHHHHHHHHHHCCHH RDFVLSRIRGIPCLEAKRVKAREHDELWNTPLTVDLKPDPRLTEVQANVVEHDYGMEKGT HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCE LTIPTNAALVRYVLDAYNIDINVLDSNPKGQQIIVANFEELKQYLYF EECCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA