Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37680402

Identifier: 37680402

GI number: 37680402

Start: 2235864

End: 2236619

Strand: Direct

Name: 37680402

Synonym: VV2218

Alternate gene names: NA

Gene position: 2235864-2236619 (Clockwise)

Preceding gene: 37680399

Following gene: 37680403

Centisome position: 66.65

GC content: 27.12

Gene sequence:

>756_bases
ATGGAAAATTATTCAATACAAAACAATGAAGATACATTCCTTATTAGAAATAGAAACGAATCAATATATATAGAATTTGT
TCTTCAAGCGATTTACAACCCATCAAGCAAGGAAATAAAATATTATGAGATATTATCTAGAATAATAAGCTCTTCAGGTG
AAAATTATAACAATGAAGACTTTTTTGAGAACATAGATGACACTTTTTTGAAAATGATCGCCATATGTCAGTTAAAAGAG
GCTAAAAGATTAAGTATTAATAAGCCTATTTCTATTAATTTAACACTATCTTGCTTACTTGATACCGATTTCATAAACGA
ACTAATAGATAGGAAAAATATTGAATTGGCAATTGAGATTAATGATATAAATTCTAATTTTGACTGCGATTTATTATTTG
AAAACATTAAAAAGTTACAAAGAAGCAATATAGAGATTTGGTTAGATGACTATCACGAGAACCATAAATTAGCTAATCTT
TCCCTTGGAACAATAAATTGGGATAAAATTAAAATTGATAAATCATTTCTACATTACAATGACTATGACATAGAAGCAAT
AAGATCACTTTGTTTTGTTTTAAGACCATTTACAAGAACAGGATTTATTTTTGAAGGTGTAGAAACTTATTATCAGGAGA
GATTAGTTAGATTGTCTGGTTCACTATCTCAAGGGTACTTTCATTCATATCCTGAAAAATGGTCAAAACACTTATCAAGT
CAAGGATACAAACATGATAAAGAAAAGGAAATTTAA

Upstream 100 bases:

>100_bases
AAAACAAGTCAACTTATATAAAAACAAGCAAGTTTGGTAGACAACAATTTACACAAGAAATATATTAAAAGCATATGATG
CAACATGATGGAGCTTATCC

Downstream 100 bases:

>100_bases
AGAGTTCCAAGGAAAATCTGTATACTTAAAAATAAGATGCTACAGAAACCACATTATCTCCTTCAATTCAAATGGAAATA
TTTCACACAAAGGGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE
AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL
SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS
QGYKHDKEKEI

Sequences:

>Translated_251_residues
MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE
AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL
SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS
QGYKHDKEKEI
>Mature_251_residues
MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNEDFFENIDDTFLKMIAICQLKE
AKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEINDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANL
SLGTINWDKIKIDKSFLHYNDYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS
QGYKHDKEKEI

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29765; Mature: 29765

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNED
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCH
FFENIDDTFLKMIAICQLKEAKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHCCCCCEEEEEE
NDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANLSLGTINWDKIKIDKSFLHYN
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEHHHCCCC
DYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS
CCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHC
QGYKHDKEKEI
CCCCCCCCCCC
>Mature Secondary Structure
MENYSIQNNEDTFLIRNRNESIYIEFVLQAIYNPSSKEIKYYEILSRIISSSGENYNNED
CCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCH
FFENIDDTFLKMIAICQLKEAKRLSINKPISINLTLSCLLDTDFINELIDRKNIELAIEI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHCCCCCEEEEEE
NDINSNFDCDLLFENIKKLQRSNIEIWLDDYHENHKLANLSLGTINWDKIKIDKSFLHYN
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEHHHCCCC
DYDIEAIRSLCFVLRPFTRTGFIFEGVETYYQERLVRLSGSLSQGYFHSYPEKWSKHLSS
CCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHC
QGYKHDKEKEI
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA