Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680277
Identifier: 37680277
GI number: 37680277
Start: 2101197
End: 2101526
Strand: Direct
Name: 37680277
Synonym: VV2093
Alternate gene names: NA
Gene position: 2101197-2101526 (Clockwise)
Preceding gene: 37680274
Following gene: 37680278
Centisome position: 62.64
GC content: 45.76
Gene sequence:
>330_bases ATGAGCAATTGTTCAAAGTTAGTTGTCACATTTCTTGCTACAAATTGGCCATTTTTGTCCCATACTGTCAGTGAAATCAT GCATCTCTTAGGAGGAACAATGAAAGTTTTTACATTAGACGATCTTTCATATAACGGCGTGCATCAAGGTGTTCATAGCT GGGATCACCCTCAAGGCGACAACCCCTACTACTGGCATCCGGACTGGCTCCATATTGCAGAAGACGCGACAGGTATGTAT CCCAAACGCGAATTAGACGTGCCTGCTGGTGAAACCGCCACAGAGCAACACGCCGCTGAAGCGATTGTCAAACATCTCAA CGGTGAATAG
Upstream 100 bases:
>100_bases CTGTCTAAACGACTGTGCCAGTTGGCGATAACGATTCATACATCCCTCATAAAACGAAGCCGAGCAACCATATCACAGTT TGTTGAGCTGAATTTGCGCA
Downstream 100 bases:
>100_bases CTTACTTACCATCGCAATGAGCTTGCCAATCGTTCGAAATGAGAACTAGAACAGATTGTCACAAAGACGCACGATAGCAA CGAGATTCACTTCACGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSNCSKLVVTFLATNWPFLSHTVSEIMHLLGGTMKVFTLDDLSYNGVHQGVHSWDHPQGDNPYYWHPDWLHIAEDATGMY PKRELDVPAGETATEQHAAEAIVKHLNGE
Sequences:
>Translated_109_residues MSNCSKLVVTFLATNWPFLSHTVSEIMHLLGGTMKVFTLDDLSYNGVHQGVHSWDHPQGDNPYYWHPDWLHIAEDATGMY PKRELDVPAGETATEQHAAEAIVKHLNGE >Mature_108_residues SNCSKLVVTFLATNWPFLSHTVSEIMHLLGGTMKVFTLDDLSYNGVHQGVHSWDHPQGDNPYYWHPDWLHIAEDATGMYP KRELDVPAGETATEQHAAEAIVKHLNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12256; Mature: 12125
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNCSKLVVTFLATNWPFLSHTVSEIMHLLGGTMKVFTLDDLSYNGVHQGVHSWDHPQGD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCCCCC NPYYWHPDWLHIAEDATGMYPKRELDVPAGETATEQHAAEAIVKHLNGE CCEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNCSKLVVTFLATNWPFLSHTVSEIMHLLGGTMKVFTLDDLSYNGVHQGVHSWDHPQGD CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCCCCCC NPYYWHPDWLHIAEDATGMYPKRELDVPAGETATEQHAAEAIVKHLNGE CCEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA