Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37680278

Identifier: 37680278

GI number: 37680278

Start: 2101629

End: 2102003

Strand: Direct

Name: 37680278

Synonym: VV2094

Alternate gene names: NA

Gene position: 2101629-2102003 (Clockwise)

Preceding gene: 37680277

Following gene: 37680279

Centisome position: 62.65

GC content: 43.2

Gene sequence:

>375_bases
TTGTGCACATCTGTTACATTTACGCAGCTTATAGTGATTATGCGCACAGCTGTCGCAAAACAAGAGATGATAAAAATGAA
AAAATACAACTCAGATGACATTCAATACAAAGGCGAAACCAATGGCGTCCATAGCTGGACTGCCCCATCTGGCCAACCTT
ACTATTGGCATCCAGATTGGTTGCACATTGCGGAAGACGCGACTGGCTCACACCCAAAACAAGAGCTAGACGTAGAAGAG
GGTTCTCAGCCAACTGAGAAACACGCGATGAAAGCGATTCTTAAACATATGAACGATTGGGCAGCGAAAAAACTAGCAAA
CAATCCTGACATCGAAACCAACGCAATCGAATCAGAAATCAACCTGAAGAAATAA

Upstream 100 bases:

>100_bases
TACTTACCATCGCAATGAGCTTGCCAATCGTTCGAAATGAGAACTAGAACAGATTGTCACAAAGACGCACGATAGCAACG
AGATTCACTTCACGTTATTT

Downstream 100 bases:

>100_bases
ACGCTTTCGATACATCACCTAATGAATAAAGCACCGAATGATCGTCGGTGCTTTTTTTATTTTTCGTTGTAAAAATGTAT
CCTTTATTGCAATGAGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MCTSVTFTQLIVIMRTAVAKQEMIKMKKYNSDDIQYKGETNGVHSWTAPSGQPYYWHPDWLHIAEDATGSHPKQELDVEE
GSQPTEKHAMKAILKHMNDWAAKKLANNPDIETNAIESEINLKK

Sequences:

>Translated_124_residues
MCTSVTFTQLIVIMRTAVAKQEMIKMKKYNSDDIQYKGETNGVHSWTAPSGQPYYWHPDWLHIAEDATGSHPKQELDVEE
GSQPTEKHAMKAILKHMNDWAAKKLANNPDIETNAIESEINLKK
>Mature_124_residues
MCTSVTFTQLIVIMRTAVAKQEMIKMKKYNSDDIQYKGETNGVHSWTAPSGQPYYWHPDWLHIAEDATGSHPKQELDVEE
GSQPTEKHAMKAILKHMNDWAAKKLANNPDIETNAIESEINLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14125; Mature: 14125

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTSVTFTQLIVIMRTAVAKQEMIKMKKYNSDDIQYKGETNGVHSWTAPSGQPYYWHPDW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCH
LHIAEDATGSHPKQELDVEEGSQPTEKHAMKAILKHMNDWAAKKLANNPDIETNAIESEI
HEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NLKK
CCCC
>Mature Secondary Structure
MCTSVTFTQLIVIMRTAVAKQEMIKMKKYNSDDIQYKGETNGVHSWTAPSGQPYYWHPDW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCH
LHIAEDATGSHPKQELDVEEGSQPTEKHAMKAILKHMNDWAAKKLANNPDIETNAIESEI
HEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
NLKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA