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The map label for this gene is dnaQ [H]

Identifier: 34498206

GI number: 34498206

Start: 2987133

End: 2987756

Strand: Reverse

Name: dnaQ [H]

Synonym: CV_2751

Alternate gene names: 34498206

Gene position: 2987756-2987133 (Counterclockwise)

Preceding gene: 34498207

Following gene: 34498204

Centisome position: 62.89

GC content: 68.43

Gene sequence:

>624_bases
ATGAGACAGCGCGTCGCCGTCATCGACTTCGAAACCAACGGCGCGACGCCGGGCGGCGACTGCCGCGCCACCGAGATCGG
CGTGGCGATGGTGGAGGACGGACGCGTGGTCGACCGTTTCCACAGCCTGATGAACGCCGGCGTCTGGGTGCCGCCGATGA
TAGAGCGGCTGACCGGCATCAGCAACGCGATGCTGAAAGACGCGCCGCCGGCGGAGCGGGTGATGCGGGACGCTGCCCAT
TTCGTCGGCGACGCCCCGCTGGCCGCGCACAACGCCGGCTTCGACCGCAAGTTCTGGGACTACGAACTGGGCTTGCTTGG
CCTGTCGCGCCGACAGGATTTCGCCTGCACGCTGCTGCTGTCGCGCCGCCTGCTGCCGCAGGCGCCGGACCACAAGCTGG
GCACGCTGGCGCGCTGGGCCGGCCTGCCCGACACCGGGCGCGCCCACCGCGCGATGGCCGACGCTGAAATGGCGGCCCAA
CTGATGCTGTTGCTTGGCGATACGCTGAGCCGGCAGTTCCATCTGGCGGACATCGACCACGCCTTGCTGTGCAAGCTGCA
GAAGGTGACGGCAGCCAAGGTCAAACCCTATTTGCGCGAGTTGCAGGCCGCAACCGCGGCATGA

Upstream 100 bases:

>100_bases
TGGCCGAAGCGCAGGAGCATATCGAGGATCAGGCCGAGTGGTACACCGACCAGTTCTTCGAAGGCCTGACGCCGGAAGAG
GCGGCCAAGGCCGCGCTGGC

Downstream 100 bases:

>100_bases
AAAAGCGGAAGCCTGGGCTTCCGCTTTTGCTTTGCGGCGGGTCATTTTTCCTGCGGCGTGATGACCTGGACCACATAGGC
ATAGGGCCCGTTCGGCGGGC

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWVPPMIERLTGISNAMLKDAPPAERVMRDAAH
FVGDAPLAAHNAGFDRKFWDYELGLLGLSRRQDFACTLLLSRRLLPQAPDHKLGTLARWAGLPDTGRAHRAMADAEMAAQ
LMLLLGDTLSRQFHLADIDHALLCKLQKVTAAKVKPYLRELQAATAA

Sequences:

>Translated_207_residues
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWVPPMIERLTGISNAMLKDAPPAERVMRDAAH
FVGDAPLAAHNAGFDRKFWDYELGLLGLSRRQDFACTLLLSRRLLPQAPDHKLGTLARWAGLPDTGRAHRAMADAEMAAQ
LMLLLGDTLSRQFHLADIDHALLCKLQKVTAAKVKPYLRELQAATAA
>Mature_207_residues
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWVPPMIERLTGISNAMLKDAPPAERVMRDAAH
FVGDAPLAAHNAGFDRKFWDYELGLLGLSRRQDFACTLLLSRRLLPQAPDHKLGTLARWAGLPDTGRAHRAMADAEMAAQ
LMLLLGDTLSRQFHLADIDHALLCKLQKVTAAKVKPYLRELQAATAA

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 22679; Mature: 22679

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWVPPMIERLTGI
CCCEEEEEEEECCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHH
SNAMLKDAPPAERVMRDAAHFVGDAPLAAHNAGFDRKFWDYELGLLGLSRRQDFACTLLL
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
SRRLLPQAPDHKLGTLARWAGLPDTGRAHRAMADAEMAAQLMLLLGDTLSRQFHLADIDH
HHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCH
ALLCKLQKVTAAKVKPYLRELQAATAA
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWVPPMIERLTGI
CCCEEEEEEEECCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHH
SNAMLKDAPPAERVMRDAAHFVGDAPLAAHNAGFDRKFWDYELGLLGLSRRQDFACTLLL
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
SRRLLPQAPDHKLGTLARWAGLPDTGRAHRAMADAEMAAQLMLLLGDTLSRQFHLADIDH
HHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCH
ALLCKLQKVTAAKVKPYLRELQAATAA
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]