| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ubiE [C]
Identifier: 34498204
GI number: 34498204
Start: 2985759
End: 2986529
Strand: Reverse
Name: ubiE [C]
Synonym: CV_2749
Alternate gene names: 34498204
Gene position: 2986529-2985759 (Counterclockwise)
Preceding gene: 34498206
Following gene: 34498203
Centisome position: 62.86
GC content: 68.87
Gene sequence:
>771_bases ATGGATGCATTGCATGGCAAGGCGCGGGACGGATTTTCCCGGGAGGCGCAGGCCTATGAGCGCGGCCGGCCGGAGTACGC GCCGGAGTTGGCGGACTGGCTGAGGCGCCAACTGGGATTGAACGACAGGGCGATCGCGCTGGATCTGGGCGCGGGCACCG GCAAGTTCAGCCGCCTGCTGGCGACGGTGGCAGGCGAAACGTTGGCGGTGGAGCCGGTGGAAGCGATGCGCGCCCAGTTG CAGGCCCGCCTGCCGAGCTTGCGGGCGCTGCCGGGAACGGCGGAAGCGATTCCGCTGCCGGATGCGTCGGTGGACGCCGT GACCTGCGCGCAGGCCTTCCACTGGTTCGCCAACGAGCGCGCGCTGAGCGAGATCCACCGGGTGCTGAAGCCGGGCGGCC GACTGGGCTTGGTATGGAATGTGCGCGACGAGTCCTGCGGCTGGGTGGCGCAGATCAGCGCGCTGCTGGCGCCGTATGAG GGGTATACGCCGCGCTTCCACTCCGGAGAATGGCGCAGGCCGTTCGAAACCGCCGGCTATTTCGCCGCGCCGGCGTTGAC GGCGCTGCCGCACCGCCATGTCGGCCCGCCGGAGCGGGTGATCATCGACCGTTTTCTATCCGTCAGCTTCATCGCCGCGC TGCCGGACGATGAAAAACGGCGTTTCGCCGAAGCCCTGCGCCGCCTGATCGCCACCCATCCCGATTTGCGCGGCCGGGAC GTGGTGGCCTTCCCCTATCGGACCGAAGCATACCGCTGCGTCCGGCGTTAA
Upstream 100 bases:
>100_bases CCTGGTCCATATTAGATATCGCGAAGCGCATTAAAAATACGTACCAATACTGTATTTGTTGAAATAATTTCACGCGCTGC TGCAAGGCGACGAGGGAAAT
Downstream 100 bases:
>100_bases TGCTTGGCGCGGTTCTCGGTACTCCGGAGCCGGGCCGGCGATGGTTTCGCTCGCGTTGGCGGAGCCGCTCCTGTTTCCGG CAGAGGGCTGCCGCGCCGCC
Product: hypothetical protein
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDALHGKARDGFSREAQAYERGRPEYAPELADWLRRQLGLNDRAIALDLGAGTGKFSRLLATVAGETLAVEPVEAMRAQL QARLPSLRALPGTAEAIPLPDASVDAVTCAQAFHWFANERALSEIHRVLKPGGRLGLVWNVRDESCGWVAQISALLAPYE GYTPRFHSGEWRRPFETAGYFAAPALTALPHRHVGPPERVIIDRFLSVSFIAALPDDEKRRFAEALRRLIATHPDLRGRD VVAFPYRTEAYRCVRR
Sequences:
>Translated_256_residues MDALHGKARDGFSREAQAYERGRPEYAPELADWLRRQLGLNDRAIALDLGAGTGKFSRLLATVAGETLAVEPVEAMRAQL QARLPSLRALPGTAEAIPLPDASVDAVTCAQAFHWFANERALSEIHRVLKPGGRLGLVWNVRDESCGWVAQISALLAPYE GYTPRFHSGEWRRPFETAGYFAAPALTALPHRHVGPPERVIIDRFLSVSFIAALPDDEKRRFAEALRRLIATHPDLRGRD VVAFPYRTEAYRCVRR >Mature_256_residues MDALHGKARDGFSREAQAYERGRPEYAPELADWLRRQLGLNDRAIALDLGAGTGKFSRLLATVAGETLAVEPVEAMRAQL QARLPSLRALPGTAEAIPLPDASVDAVTCAQAFHWFANERALSEIHRVLKPGGRLGLVWNVRDESCGWVAQISALLAPYE GYTPRFHSGEWRRPFETAGYFAAPALTALPHRHVGPPERVIIDRFLSVSFIAALPDDEKRRFAEALRRLIATHPDLRGRD VVAFPYRTEAYRCVRR
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 28518; Mature: 28518
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALHGKARDGFSREAQAYERGRPEYAPELADWLRRQLGLNDRAIALDLGAGTGKFSRLL CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH ATVAGETLAVEPVEAMRAQLQARLPSLRALPGTAEAIPLPDASVDAVTCAQAFHWFANER HHHHCCCEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ALSEIHRVLKPGGRLGLVWNVRDESCGWVAQISALLAPYEGYTPRFHSGEWRRPFETAGY HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC FAAPALTALPHRHVGPPERVIIDRFLSVSFIAALPDDEKRRFAEALRRLIATHPDLRGRD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC VVAFPYRTEAYRCVRR EEEECCHHHHHHHHCC >Mature Secondary Structure MDALHGKARDGFSREAQAYERGRPEYAPELADWLRRQLGLNDRAIALDLGAGTGKFSRLL CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH ATVAGETLAVEPVEAMRAQLQARLPSLRALPGTAEAIPLPDASVDAVTCAQAFHWFANER HHHHCCCEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ALSEIHRVLKPGGRLGLVWNVRDESCGWVAQISALLAPYEGYTPRFHSGEWRRPFETAGY HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC FAAPALTALPHRHVGPPERVIIDRFLSVSFIAALPDDEKRRFAEALRRLIATHPDLRGRD HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC VVAFPYRTEAYRCVRR EEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]