Click here to switch to the map view.

The map label for this gene is yaeJ [C]

Identifier: 34498207

GI number: 34498207

Start: 2988019

End: 2988426

Strand: Reverse

Name: yaeJ [C]

Synonym: CV_2752

Alternate gene names: 34498207

Gene position: 2988426-2988019 (Counterclockwise)

Preceding gene: 34498208

Following gene: 34498206

Centisome position: 62.9

GC content: 67.89

Gene sequence:

>408_bases
ATGCCGCCTTCCCTGTATCTGGTCAAAGAGGACGAGGTGACGTTCACCGCGATGCGCGCCCAGGGCGCCGGCGGCCAGAA
CGTCAACAAGGTCTCGTCCGCCGTCCACCTGCGTTTCGACATCGCGGCTTCGTCGCTGCCGGCCTGGCTGCGCGAACGGC
TGCTGGGCCTGAGCGACCAGCGGCTGAGCAAGGACGGCGTGCTGGTGATCAAGGCGCAGCAGCATCGCACCCAGGAGCAG
AACCGCGCGGACGCGATCGATCGGCTGCAGGCGCTGGTAGACGCCGTCAGCCACACGCCCAAGACGCGCCGCGCCACCAA
GCCGACTTATGGCTCGAAGCAGCGCCGACTGGAGGGGAAGTCAAGGCGCTCGGCGGTGAAATCGCTGCGCGGACGCGTCG
GCGATTAG

Upstream 100 bases:

>100_bases
AGCGCGCGGTTCGCAGGCTTGGCGCTTGATGCGGACAGGCCGCGCGGACCATGGAGTCCGCGCGGTTTATAATGCTTGTT
TCGCAACGATTGTTTCAGCC

Downstream 100 bases:

>100_bases
CCTTGGGAACCGAAGCCGCGTACAATGCGCGGCTTTATCGCAAGTAATTGAAGGGAAAGGCCATGGCCCGGAAACAGCAG
GAACAACTGGACGAGGAGAC

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPPSLYLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRERLLGLSDQRLSKDGVLVIKAQQHRTQEQ
NRADAIDRLQALVDAVSHTPKTRRATKPTYGSKQRRLEGKSRRSAVKSLRGRVGD

Sequences:

>Translated_135_residues
MPPSLYLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRERLLGLSDQRLSKDGVLVIKAQQHRTQEQ
NRADAIDRLQALVDAVSHTPKTRRATKPTYGSKQRRLEGKSRRSAVKSLRGRVGD
>Mature_134_residues
PPSLYLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRERLLGLSDQRLSKDGVLVIKAQQHRTQEQN
RADAIDRLQALVDAVSHTPKTRRATKPTYGSKQRRLEGKSRRSAVKSLRGRVGD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=126, Percent_Identity=53.968253968254, Blast_Score=142, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19921098, Length=130, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 14974; Mature: 14843

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSLYLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRERLLGLSDQ
CCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCC
RLSKDGVLVIKAQQHRTQEQNRADAIDRLQALVDAVSHTPKTRRATKPTYGSKQRRLEGK
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCH
SRRSAVKSLRGRVGD
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
PPSLYLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRERLLGLSDQ
CCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCC
RLSKDGVLVIKAQQHRTQEQNRADAIDRLQALVDAVSHTPKTRRATKPTYGSKQRRLEGK
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCH
SRRSAVKSLRGRVGD
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]