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The map label for this gene is armS [H]

Identifier: 34498089

GI number: 34498089

Start: 2842588

End: 2843832

Strand: Reverse

Name: armS [H]

Synonym: CV_2634

Alternate gene names: 34498089

Gene position: 2843832-2842588 (Counterclockwise)

Preceding gene: 34498090

Following gene: 34498088

Centisome position: 59.86

GC content: 66.51

Gene sequence:

>1245_bases
GTGAGCGTGAGGCTGCGCCTATTCCTGATATTGGGCGCGGTTCTTGGCCTGTTGCTCGCCTGCGGGGCGGTCTGGTTTCT
GTCGGAGCTGGGATCGGTTGCGGATGAGTGGTCGGAAGCGTCGGAGCAATGGGCGATCGGATGGCTGGCGCGGATGCCGT
CGACGCCGACGTCTTGGCCCTGGAAGGCGGCTGGTGCCGGAGAGGAGAGCGTCTGTCGACGGACCGCTGCGCAGACGGAC
ATGTTGCCTGCGGTTCCCGGCCTTCCTCCTCATCCTCGTGTTGCCGTTTCTGGCGTTGCCATCCGGAACTTGAGCGATGA
GGCCTTGCGCGATGGTGTTGACCGCCGGGCGCTGCGCGCCCGCCAGCTGTCCCGCGCCCGCAGGAGGGTGGCCGTCTGCT
TTCTCATCGTCTGGGCGGGCTGCCTGGCCATCGTATGGCTGGGAGTTGGCCTGGGGGGGCGACAATTAGGGCGTTTGCGA
GGTTTGCTGTCCAGGGAGGCGGCATCGTTGCCTGGATTGCCGCGCGAACCGCAGGCTCAGCTTGCTAGCTTGAATCGATT
ACTGATTCGGACGGGGCAGGCATTGCAGCGGGAGCGGAGGCTGGCCTGTGATGCCGCGCACGAGTTGCGGACGCCGTTAA
CGGTGATCAAAACCCATCTGCAAGTAGCGCAGATCGTTGGCGATGCGGAGGCGAGGCGCGCGCTGGGCCATGCGCTTGAA
GGCACGAGCAGGCTGCAGCGGGTATTGGAGCAGATGCTGACGCTGGCGCGTTTGGATGAGGGGGACGCGAGCGCGGAGGA
GGCGCGGGCCGGGGCGGACGATGTGGTTGGCCGGGCGGTGGAGGACGCGACCTGGGGGCTGTGCTGGCGCGTGAGCTGTT
CAGTCCAGCCCGCGCTGGCGGTGGCCTTGCCTCTGGAGTTGGCGGTGATCGCGCTGCGCAATCTGCTGGACAATGCTCTG
CGCTATTCGCCGTCAGATGCGGCGGTCGTGCTGACGGTTTCCGCGTCTGCGGGAATGGTGAATTTCGAGGTTTCGGATCT
GGGCGACGGGCTGAGCGAAGAGGAGTGTCGATTGGCCACTCGGCGTTTTTGGCGCGGTCGGCATCGCGGAGATGGTTGCG
GTCTGGGACTGCCCATCGTGTCGAGCATAGCCGAACGCTTTGGCGGCCGCCTCGTGCTGCGCAGGCGGGCAAGCCGGGGG
CTGGTGGCGCTGCTGGTTCTGCCTGCGGCATCACCGGCGCGCTGA

Upstream 100 bases:

>100_bases
ATGCCCTGAACGTCCATATCTGCCATCTGCGGCGCAAGCTCGGTCCGAATGTGGTGAAAACCGTCAGGGGCTTGGGTTAT
CGCTATGGCGGAGTCGGGAA

Downstream 100 bases:

>100_bases
ACTCGGCGCCGCCACGCGCTTGCAACCGGCCTTCACCGATCCCGGCCGCCGCGACCGCTTCCCGGACAAGATGGGGCGGC
TTATGCCCCGGATGTAACGG

Product: two-component sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSVRLRLFLILGAVLGLLLACGAVWFLSELGSVADEWSEASEQWAIGWLARMPSTPTSWPWKAAGAGEESVCRRTAAQTD
MLPAVPGLPPHPRVAVSGVAIRNLSDEALRDGVDRRALRARQLSRARRRVAVCFLIVWAGCLAIVWLGVGLGGRQLGRLR
GLLSREAASLPGLPREPQAQLASLNRLLIRTGQALQRERRLACDAAHELRTPLTVIKTHLQVAQIVGDAEARRALGHALE
GTSRLQRVLEQMLTLARLDEGDASAEEARAGADDVVGRAVEDATWGLCWRVSCSVQPALAVALPLELAVIALRNLLDNAL
RYSPSDAAVVLTVSASAGMVNFEVSDLGDGLSEEECRLATRRFWRGRHRGDGCGLGLPIVSSIAERFGGRLVLRRRASRG
LVALLVLPAASPAR

Sequences:

>Translated_414_residues
MSVRLRLFLILGAVLGLLLACGAVWFLSELGSVADEWSEASEQWAIGWLARMPSTPTSWPWKAAGAGEESVCRRTAAQTD
MLPAVPGLPPHPRVAVSGVAIRNLSDEALRDGVDRRALRARQLSRARRRVAVCFLIVWAGCLAIVWLGVGLGGRQLGRLR
GLLSREAASLPGLPREPQAQLASLNRLLIRTGQALQRERRLACDAAHELRTPLTVIKTHLQVAQIVGDAEARRALGHALE
GTSRLQRVLEQMLTLARLDEGDASAEEARAGADDVVGRAVEDATWGLCWRVSCSVQPALAVALPLELAVIALRNLLDNAL
RYSPSDAAVVLTVSASAGMVNFEVSDLGDGLSEEECRLATRRFWRGRHRGDGCGLGLPIVSSIAERFGGRLVLRRRASRG
LVALLVLPAASPAR
>Mature_413_residues
SVRLRLFLILGAVLGLLLACGAVWFLSELGSVADEWSEASEQWAIGWLARMPSTPTSWPWKAAGAGEESVCRRTAAQTDM
LPAVPGLPPHPRVAVSGVAIRNLSDEALRDGVDRRALRARQLSRARRRVAVCFLIVWAGCLAIVWLGVGLGGRQLGRLRG
LLSREAASLPGLPREPQAQLASLNRLLIRTGQALQRERRLACDAAHELRTPLTVIKTHLQVAQIVGDAEARRALGHALEG
TSRLQRVLEQMLTLARLDEGDASAEEARAGADDVVGRAVEDATWGLCWRVSCSVQPALAVALPLELAVIALRNLLDNALR
YSPSDAAVVLTVSASAGMVNFEVSDLGDGLSEEECRLATRRFWRGRHRGDGCGLGLPIVSSIAERFGGRLVLRRRASRGL
VALLVLPAASPAR

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=278, Percent_Identity=34.5323741007194, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788279, Length=357, Percent_Identity=26.0504201680672, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790551, Length=311, Percent_Identity=28.6173633440514, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786783, Length=251, Percent_Identity=29.4820717131474, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790346, Length=240, Percent_Identity=27.9166666666667, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=26.8518518518519, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788393, Length=233, Percent_Identity=24.0343347639485, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1790861, Length=210, Percent_Identity=30, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 44573; Mature: 44442

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLRLFLILGAVLGLLLACGAVWFLSELGSVADEWSEASEQWAIGWLARMPSTPTSWP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WKAAGAGEESVCRRTAAQTDMLPAVPGLPPHPRVAVSGVAIRNLSDEALRDGVDRRALRA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHCCCHHHHHCCHHHHHHHH
RQLSRARRRVAVCFLIVWAGCLAIVWLGVGLGGRQLGRLRGLLSREAASLPGLPREPQAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LASLNRLLIRTGQALQRERRLACDAAHELRTPLTVIKTHLQVAQIVGDAEARRALGHALE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GTSRLQRVLEQMLTLARLDEGDASAEEARAGADDVVGRAVEDATWGLCWRVSCSVQPALA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHH
VALPLELAVIALRNLLDNALRYSPSDAAVVLTVSASAGMVNFEVSDLGDGLSEEECRLAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHCCCCCHHHHHHHH
RRFWRGRHRGDGCGLGLPIVSSIAERFGGRLVLRRRASRGLVALLVLPAASPAR
HHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SVRLRLFLILGAVLGLLLACGAVWFLSELGSVADEWSEASEQWAIGWLARMPSTPTSWP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WKAAGAGEESVCRRTAAQTDMLPAVPGLPPHPRVAVSGVAIRNLSDEALRDGVDRRALRA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHCCCHHHHHCCHHHHHHHH
RQLSRARRRVAVCFLIVWAGCLAIVWLGVGLGGRQLGRLRGLLSREAASLPGLPREPQAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LASLNRLLIRTGQALQRERRLACDAAHELRTPLTVIKTHLQVAQIVGDAEARRALGHALE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GTSRLQRVLEQMLTLARLDEGDASAEEARAGADDVVGRAVEDATWGLCWRVSCSVQPALA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHH
VALPLELAVIALRNLLDNALRYSPSDAAVVLTVSASAGMVNFEVSDLGDGLSEEECRLAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHCCCCCHHHHHHHH
RRFWRGRHRGDGCGLGLPIVSSIAERFGGRLVLRRRASRGLVALLVLPAASPAR
HHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]