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The map label for this gene is ynfJ [C]

Identifier: 34497884

GI number: 34497884

Start: 2611860

End: 2613176

Strand: Reverse

Name: ynfJ [C]

Synonym: CV_2429

Alternate gene names: 34497884

Gene position: 2613176-2611860 (Counterclockwise)

Preceding gene: 34497891

Following gene: 34497882

Centisome position: 55.0

GC content: 63.02

Gene sequence:

>1317_bases
ATGATGCAAAGAAAATTGCCGGCTCTGTCATTTGCGCTGTCTTTCATCGGCAAATGGTCGTTGCTTTCCGCGCTGGTCGC
CGCCTTGTCCGGCACGGCATCCGCGTTTTTCCTGTTCGCGCTCGAGCAAGCTACGCGCACCCGACTCGCTCACCCATGGC
TGATCTGGTTATTGCCGCTTGGAGGCTTTGCCGTTGGAATGGCCTATCTGCGGCTGGGGAAGGAAGTTGAAGGCGGCAAT
AATCTGCTGATAGACGAAATTCACGATCCCCAAAAAACCGTGCCGCTGCGCATGGTCCCTCTAGTGCTGACCGGCACAGT
CGTTACCCACCTGTTCGGCGGCTCGGCCGGACGAGAAGGCACCGCGGTGCAAATGGGAGGCGCGCTGGCCGACCAGGTCC
ATAAGGTGCTGCCTTTGCAGCCTGAAGACAGGCGCATGCTGTTGATGGCCGGGATCAGCGTCGGTTTTGCTTCGGTTTTC
GGCACCCCGCTCGCCGGCGCGATTTTCGGCCTAGAGATGCTCGCCATTGGGCGCTTGCGCTACGATGCGATCCTGCCCTG
TCTGGCTGCCGCCATTCTCGGCGATCAGGCGAGCTTGCTTTGGGGCGTGCATCATACCTTCTACCGGATTCCCTTCATTC
CCGCTCTCGATGCCTGGGGACTGTGCGCCTCGGTTCTGGCCGGGGCGGCGTTCGGCCTGACCGGCAAACTGTTCGCGGAG
TCCGTGCACTGGTTGGCCGATTGTCTGAGGCGCCGCATCGCGTTCGCGCCGCTGCGGCCTTTGATCGGCGGAGGCGCCAT
CGCCGTCGCGGCATCGCTGATGGATGCGCGGGCTTATCTTGGCCTGGGCATTCCGACCCTTGTTTCCGCCTTCCAGCAGC
CGCTGTCGCCCTATGACGTCATCGGCAAGCTGGGTTTTACCGTCGCGACGCTCGGTTCCGGCTTCAAGGGCGGCGAAGTG
ACGCCGCTGTTCTACATCGGCGCGGCGCTGGGCAATATGCTGGCCCCCCTGTTGCACCTGCCCTTCCCCTTGCTGGCCGG
CATGGGTTTCGTGGCGGTGTTTGCCGGCGCGGCCAATACGCCGCTCGCCTCCACCGTGATGGCTCTGGAACTGTTCGGTT
CGGAGATCGGCGTTTACGCCGGCATGGCCTGCGTGGTCGCTTACCTGTTTTCGGGCCATTCCAGCATCTATCGGGCTCAA
CGCATAGGCGTGGCCAAGCGTCGCGGCGTGCCGGAAAACATCAGACTGGCCGATTGGCCGGCTTTGCGCCAGGCAACGAG
GCGGAAACAGGAGACCTCGGGCCCTGACGCCGGCTAG

Upstream 100 bases:

>100_bases
GGGTTGATGATGCCTACGGTATTCCTGGCACGGAAGCTGTAGGCGCGCGCCCTATCCCCTGTCCGTCCAGGCGTTTAGAT
TCGACTGTATTGGACATTCC

Downstream 100 bases:

>100_bases
CGCGCCGTTCCCGGCGGCACGCCCAACAGCTTCATCTCCATCGGCGGCGCGTCCCGCGGCAGCCATTTGTTGTAGATGCG
CTTGAACGTGCCGTCCTTTT

Product: chloride channel protein EriC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MMQRKLPALSFALSFIGKWSLLSALVAALSGTASAFFLFALEQATRTRLAHPWLIWLLPLGGFAVGMAYLRLGKEVEGGN
NLLIDEIHDPQKTVPLRMVPLVLTGTVVTHLFGGSAGREGTAVQMGGALADQVHKVLPLQPEDRRMLLMAGISVGFASVF
GTPLAGAIFGLEMLAIGRLRYDAILPCLAAAILGDQASLLWGVHHTFYRIPFIPALDAWGLCASVLAGAAFGLTGKLFAE
SVHWLADCLRRRIAFAPLRPLIGGGAIAVAASLMDARAYLGLGIPTLVSAFQQPLSPYDVIGKLGFTVATLGSGFKGGEV
TPLFYIGAALGNMLAPLLHLPFPLLAGMGFVAVFAGAANTPLASTVMALELFGSEIGVYAGMACVVAYLFSGHSSIYRAQ
RIGVAKRRGVPENIRLADWPALRQATRRKQETSGPDAG

Sequences:

>Translated_438_residues
MMQRKLPALSFALSFIGKWSLLSALVAALSGTASAFFLFALEQATRTRLAHPWLIWLLPLGGFAVGMAYLRLGKEVEGGN
NLLIDEIHDPQKTVPLRMVPLVLTGTVVTHLFGGSAGREGTAVQMGGALADQVHKVLPLQPEDRRMLLMAGISVGFASVF
GTPLAGAIFGLEMLAIGRLRYDAILPCLAAAILGDQASLLWGVHHTFYRIPFIPALDAWGLCASVLAGAAFGLTGKLFAE
SVHWLADCLRRRIAFAPLRPLIGGGAIAVAASLMDARAYLGLGIPTLVSAFQQPLSPYDVIGKLGFTVATLGSGFKGGEV
TPLFYIGAALGNMLAPLLHLPFPLLAGMGFVAVFAGAANTPLASTVMALELFGSEIGVYAGMACVVAYLFSGHSSIYRAQ
RIGVAKRRGVPENIRLADWPALRQATRRKQETSGPDAG
>Mature_438_residues
MMQRKLPALSFALSFIGKWSLLSALVAALSGTASAFFLFALEQATRTRLAHPWLIWLLPLGGFAVGMAYLRLGKEVEGGN
NLLIDEIHDPQKTVPLRMVPLVLTGTVVTHLFGGSAGREGTAVQMGGALADQVHKVLPLQPEDRRMLLMAGISVGFASVF
GTPLAGAIFGLEMLAIGRLRYDAILPCLAAAILGDQASLLWGVHHTFYRIPFIPALDAWGLCASVLAGAAFGLTGKLFAE
SVHWLADCLRRRIAFAPLRPLIGGGAIAVAASLMDARAYLGLGIPTLVSAFQQPLSPYDVIGKLGFTVATLGSGFKGGEV
TPLFYIGAALGNMLAPLLHLPFPLLAGMGFVAVFAGAANTPLASTVMALELFGSEIGVYAGMACVVAYLFSGHSSIYRAQ
RIGVAKRRGVPENIRLADWPALRQATRRKQETSGPDAG

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 46245; Mature: 46245

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQRKLPALSFALSFIGKWSLLSALVAALSGTASAFFLFALEQATRTRLAHPWLIWLLPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GGFAVGMAYLRLGKEVEGGNNLLIDEIHDPQKTVPLRMVPLVLTGTVVTHLFGGSAGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADQVHKVLPLQPEDRRMLLMAGISVGFASVFGTPLAGAIFGLEMLAIGRLR
CEEEECHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDAILPCLAAAILGDQASLLWGVHHTFYRIPFIPALDAWGLCASVLAGAAFGLTGKLFAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
SVHWLADCLRRRIAFAPLRPLIGGGAIAVAASLMDARAYLGLGIPTLVSAFQQPLSPYDV
HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
IGKLGFTVATLGSGFKGGEVTPLFYIGAALGNMLAPLLHLPFPLLAGMGFVAVFAGAANT
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PLASTVMALELFGSEIGVYAGMACVVAYLFSGHSSIYRAQRIGVAKRRGVPENIRLADWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCCCCCEECCCH
ALRQATRRKQETSGPDAG
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMQRKLPALSFALSFIGKWSLLSALVAALSGTASAFFLFALEQATRTRLAHPWLIWLLPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GGFAVGMAYLRLGKEVEGGNNLLIDEIHDPQKTVPLRMVPLVLTGTVVTHLFGGSAGREG
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
TAVQMGGALADQVHKVLPLQPEDRRMLLMAGISVGFASVFGTPLAGAIFGLEMLAIGRLR
CEEEECHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDAILPCLAAAILGDQASLLWGVHHTFYRIPFIPALDAWGLCASVLAGAAFGLTGKLFAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
SVHWLADCLRRRIAFAPLRPLIGGGAIAVAASLMDARAYLGLGIPTLVSAFQQPLSPYDV
HHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
IGKLGFTVATLGSGFKGGEVTPLFYIGAALGNMLAPLLHLPFPLLAGMGFVAVFAGAANT
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PLASTVMALELFGSEIGVYAGMACVVAYLFSGHSSIYRAQRIGVAKRRGVPENIRLADWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCCCCCEECCCH
ALRQATRRKQETSGPDAG
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]