| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497891
Identifier: 34497891
GI number: 34497891
Start: 2620938
End: 2622461
Strand: Reverse
Name: 34497891
Synonym: CV_2436
Alternate gene names: NA
Gene position: 2622461-2620938 (Counterclockwise)
Preceding gene: 34497892
Following gene: 34497884
Centisome position: 55.2
GC content: 48.69
Gene sequence:
>1524_bases ATGACTCTCAGGCAAGCGGGTGCTTACATCGACGATCAGGCATTATTAGCTGCACATAAAGCCGCCAAAATGGCTAGATT GTCGTGCGAAATCGGTGGCGAAACTTGGAAAGAGAAAATTGAATGTAAGTTCTTTCCGAAATTCACCATCTTTTTTGATG GCACAATGAACAATCTGAATACCTCGCCGGATAATAAGTCCAATGTGGCCCGCTTATTTCTGACCGCCTACGACGACAGA GGTAAAGAATACTATCCCCGCTACATCACTGGCGTTGGCACTTTATACGAACCCAAGGACAATCCCGAAGTTGGCGTAGA CAAAGGCGGCAATATGGGTGCCGGTTTCGGCAAGGGTGGCGATATGCGCCTGAAGGACGCCATCCTTTTTATTGAGAAGA CATTAGGCAGGAATTACACAACGGCCATTGCGCATATCAAAATGCTCCGGGTGGATGTAATTGGTTTCTCGCGCGGGGCA ACACTTGCCCGAGCATTCGTATACGGCATGACTGTTCCCTTGGAAATCGGCTTTCTCGGCCTGTTTGATACTGTGGCCTC GGTGGGCGGGCCGCAGTTGCACGCGGATTGGGCCAAAGACTTGCGCGTGCCGTCCGCTGTAAAACGCTGCGTCCATCTCG TCGCCGCGCATGAAGTCCGCAAAGCCTTCCCGTTGGACTCCATCCAATACAAAAACAAATATCCCGACAATAGTGAAGAA GTTGTCTATCCCGGTGTGCATTCTGATGTAGGCGGCGGCTATTACCCGAACGAGCAAGGCCGCAGTCTGGAATACACCAA AATTCCTCTGCGGGAGATGTATTTAGAGGCGCTAAAAGCAGGCGTTGGATTGCAGTCGCTTACGGAGATGACAAAAGAGT ATAGGGGCGAATTCACACCCGAAAATCGGGTGGAGCTCGTCGAAAAATATAAATCTTATATGGAGTATGTAAAAGCTCCG ATAGGTGCAAAAAAAACATCGGATGCGAAAGCCAAAGAAGATAACTTGGTTTCATTGATATTGGCACATCGACCGGTATT CTTTAGGTGGCATGCAGATGTGGAACGCAGTGGCGATAAAACTCGACTTTTCTCTGGATTAGCAAAAGAGGCTGACTGTT CCGCGTGCTTATCCGCTCCAGCGGAACGCATCAAGGTCGAGAAAAATGAAAAGCTGTGGGCTAGTCGCAATATGAAGGAT GCGACAGGGCAGGGCAAAGAGCTGGTTACAGAGCATAAGCGTCTTGCAAATCGCATTCCCTTCATCAAAGAACCTTATGA GCGCATAGGCAATGAAAACGTCGATCGGCCAAGGACGGATTATGAGGAACTCATTTACAGTGCTTGGACCAATCCGAATC CGTTGCCTAAATACATTATCGAGTTCTTTGAAGAGTATGTGCATGATTCCGTGGCGGCATTTGATAGCTGGCCATGCGCG CTATATGATCCACGAAAAATATTCATGCATGAAGATACCGTCCTAGCTCAACGGACAAGCCCTGAGACAGATGCAATTGC CTAG
Upstream 100 bases:
>100_bases TGATCATATAAATAGCGAAGATGTGATGTGCGTAGTAATCAGAGACCTTGAAAAGGTTGAATTAAAATACGCTAACGAAT ACGATTGCAGGGATAAGTAG
Downstream 100 bases:
>100_bases GTCGCACTATAGAGCGGTGAAACATGCTTTGACACTGGCGGTGCTTGCGACCCTGGCCGGATGCTCCTTGCCCGATACGG ATGCAACCGTGACACGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTLRQAGAYIDDQALLAAHKAAKMARLSCEIGGETWKEKIECKFFPKFTIFFDGTMNNLNTSPDNKSNVARLFLTAYDDR GKEYYPRYITGVGTLYEPKDNPEVGVDKGGNMGAGFGKGGDMRLKDAILFIEKTLGRNYTTAIAHIKMLRVDVIGFSRGA TLARAFVYGMTVPLEIGFLGLFDTVASVGGPQLHADWAKDLRVPSAVKRCVHLVAAHEVRKAFPLDSIQYKNKYPDNSEE VVYPGVHSDVGGGYYPNEQGRSLEYTKIPLREMYLEALKAGVGLQSLTEMTKEYRGEFTPENRVELVEKYKSYMEYVKAP IGAKKTSDAKAKEDNLVSLILAHRPVFFRWHADVERSGDKTRLFSGLAKEADCSACLSAPAERIKVEKNEKLWASRNMKD ATGQGKELVTEHKRLANRIPFIKEPYERIGNENVDRPRTDYEELIYSAWTNPNPLPKYIIEFFEEYVHDSVAAFDSWPCA LYDPRKIFMHEDTVLAQRTSPETDAIA
Sequences:
>Translated_507_residues MTLRQAGAYIDDQALLAAHKAAKMARLSCEIGGETWKEKIECKFFPKFTIFFDGTMNNLNTSPDNKSNVARLFLTAYDDR GKEYYPRYITGVGTLYEPKDNPEVGVDKGGNMGAGFGKGGDMRLKDAILFIEKTLGRNYTTAIAHIKMLRVDVIGFSRGA TLARAFVYGMTVPLEIGFLGLFDTVASVGGPQLHADWAKDLRVPSAVKRCVHLVAAHEVRKAFPLDSIQYKNKYPDNSEE VVYPGVHSDVGGGYYPNEQGRSLEYTKIPLREMYLEALKAGVGLQSLTEMTKEYRGEFTPENRVELVEKYKSYMEYVKAP IGAKKTSDAKAKEDNLVSLILAHRPVFFRWHADVERSGDKTRLFSGLAKEADCSACLSAPAERIKVEKNEKLWASRNMKD ATGQGKELVTEHKRLANRIPFIKEPYERIGNENVDRPRTDYEELIYSAWTNPNPLPKYIIEFFEEYVHDSVAAFDSWPCA LYDPRKIFMHEDTVLAQRTSPETDAIA >Mature_506_residues TLRQAGAYIDDQALLAAHKAAKMARLSCEIGGETWKEKIECKFFPKFTIFFDGTMNNLNTSPDNKSNVARLFLTAYDDRG KEYYPRYITGVGTLYEPKDNPEVGVDKGGNMGAGFGKGGDMRLKDAILFIEKTLGRNYTTAIAHIKMLRVDVIGFSRGAT LARAFVYGMTVPLEIGFLGLFDTVASVGGPQLHADWAKDLRVPSAVKRCVHLVAAHEVRKAFPLDSIQYKNKYPDNSEEV VYPGVHSDVGGGYYPNEQGRSLEYTKIPLREMYLEALKAGVGLQSLTEMTKEYRGEFTPENRVELVEKYKSYMEYVKAPI GAKKTSDAKAKEDNLVSLILAHRPVFFRWHADVERSGDKTRLFSGLAKEADCSACLSAPAERIKVEKNEKLWASRNMKDA TGQGKELVTEHKRLANRIPFIKEPYERIGNENVDRPRTDYEELIYSAWTNPNPLPKYIIEFFEEYVHDSVAAFDSWPCAL YDPRKIFMHEDTVLAQRTSPETDAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57145; Mature: 57013
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRQAGAYIDDQALLAAHKAAKMARLSCEIGGETWKEKIECKFFPKFTIFFDGTMNNLN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECEEEEEECCCCCCCC TSPDNKSNVARLFLTAYDDRGKEYYPRYITGVGTLYEPKDNPEVGVDKGGNMGAGFGKGG CCCCCCCCCEEEEEEEECCCCCHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC DMRLKDAILFIEKTLGRNYTTAIAHIKMLRVDVIGFSRGATLARAFVYGMTVPLEIGFLG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHH LFDTVASVGGPQLHADWAKDLRVPSAVKRCVHLVAAHEVRKAFPLDSIQYKNKYPDNSEE HHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC VVYPGVHSDVGGGYYPNEQGRSLEYTKIPLREMYLEALKAGVGLQSLTEMTKEYRGEFTP EEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC ENRVELVEKYKSYMEYVKAPIGAKKTSDAKAKEDNLVSLILAHRPVFFRWHADVERSGDK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHCCCCH TRLFSGLAKEADCSACLSAPAERIKVEKNEKLWASRNMKDATGQGKELVTEHKRLANRIP HHHHHHHCCCCHHHHHHHCCHHHEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCC FIKEPYERIGNENVDRPRTDYEELIYSAWTNPNPLPKYIIEFFEEYVHDSVAAFDSWPCA CCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC LYDPRKIFMHEDTVLAQRTSPETDAIA EECCCEEEEECCHHEEECCCCCCCCCC >Mature Secondary Structure TLRQAGAYIDDQALLAAHKAAKMARLSCEIGGETWKEKIECKFFPKFTIFFDGTMNNLN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECEEEEEECCCCCCCC TSPDNKSNVARLFLTAYDDRGKEYYPRYITGVGTLYEPKDNPEVGVDKGGNMGAGFGKGG CCCCCCCCCEEEEEEEECCCCCHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC DMRLKDAILFIEKTLGRNYTTAIAHIKMLRVDVIGFSRGATLARAFVYGMTVPLEIGFLG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHH LFDTVASVGGPQLHADWAKDLRVPSAVKRCVHLVAAHEVRKAFPLDSIQYKNKYPDNSEE HHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC VVYPGVHSDVGGGYYPNEQGRSLEYTKIPLREMYLEALKAGVGLQSLTEMTKEYRGEFTP EEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC ENRVELVEKYKSYMEYVKAPIGAKKTSDAKAKEDNLVSLILAHRPVFFRWHADVERSGDK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHCCCCH TRLFSGLAKEADCSACLSAPAERIKVEKNEKLWASRNMKDATGQGKELVTEHKRLANRIP HHHHHHHCCCCHHHHHHHCCHHHEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCC FIKEPYERIGNENVDRPRTDYEELIYSAWTNPNPLPKYIIEFFEEYVHDSVAAFDSWPCA CCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC LYDPRKIFMHEDTVLAQRTSPETDAIA EECCCEEEEECCHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA